Clostridium botulinum F 230613: CBF_2563
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Entry
CBF_2563 CDS
T01865
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cbm
Clostridium botulinum F 230613
Pathway
cbm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CBF_2563 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbm03400
]
CBF_2563 (priA)
Enzymes [BR:
cbm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CBF_2563 (priA)
DNA repair and recombination proteins [BR:
cbm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CBF_2563 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
PriA_CRR
Helicase_C
T2SSE
AAA_30
SLFN-g3_helicase
AAA_19
nSTAND3
Viral_helicase1
zinc-ribbons_6
AAA_11
AAA_7
AAA_14
TrwB_AAD_bind
AAA_22
Flavi_DEAD
AAA_33
AAA_16
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
ADG00210
LinkDB
All DBs
Position
complement(2695031..2697238)
Genome browser
AA seq
735 aa
AA seq
DB search
MFKYAGIIVNNSSIKLDKLFTYAIPEELNKKIRIGHRVKVPFGKGNKKIDGFVLKLYENY
EDENKVSIKSISNICEEDPLLDLNRVNLVEQMKERYLCTYLEAIKVLVPPGITKGNKEKK
ENFILIYKDLEGKYLKENYEQIYNFVKLNDGVYNKNVLNKKFGFSLSSINTLIKHEFLIQ
KNQVVNRYNEKIYGNYEEKILNGDQSLALYRILNSNRKLFLIHGVTGSGKTEIYMHLVKK
LIEKDKDSIILVPEISLTPQMVERFKGRFGKSIAIFHSKLSNGERFDEWMRVKRGEVKVA
IGARSAVFLPFKNLGAIIIDEEHESSYKSDSNPKYNARDIAELRCMNEGCKIILGSATPS
LETYYRSKNKIIDLITIKERIEGASMPEVKIVDMREELMSGNKSIFSRELFEDISTRLEK
KEQIILFLNRRGFSTFVSCRECGYVFKCKNCDISLTYHNKDNSLRCHYCGASTRIPKQCP
KCNSKYVKYFGAGTEKVEKAIKKCFPKAKTLRMDLDTTRTKNAYENIYNTFKKGEADILI
GTQMIAKGLDFENVTLVGVLAADMSLNLPDYRSGERTFQLITQVSGRAGRGKKEGKVLIQ
SYNPENYSIASAAKSDYEGFYNKEIKIRKDMNYPPFSKILLINLSSKYENKLIKNTHKVG
IILKNVLSKYDNLNMLGPCPSPLSKIKEMYRWQIILKGNVTGDIMKEIQKIVYTSLEQVY
NDIRVSIDINPNSLL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
gtgtttaagtatgcaggtattatagtaaataattcttctataaaattagataaattattt
acttatgctattccagaggaattgaataaaaaaataagaataggacatagagtaaaagtt
cccttcggtaaaggtaataaaaaaatagatggttttgttttaaaactatatgaaaactat
gaagatgaaaataaagtttctataaaatctataagcaatatatgtgaagaggatcctcta
ttagatttaaatagagtaaatcttgtagaacaaatgaaggaaagatatctttgtacatat
ttagaagctataaaagtattagtgccaccaggtattacaaagggaaacaaagaaaaaaaa
gaaaattttatacttatatataaagatttagagggaaaatatttaaaagaaaattatgag
caaatatataacttcgtaaaactaaatgatggagtttataataaaaatgtattaaataaa
aaatttggattttccttatcttccataaatacattaataaaacatgaatttttaattcaa
aagaaccaagtagtaaatagatataatgaaaaaatatatggaaattatgaagaaaaaata
ctaaatggagaccaaagtttagctctttatagaattttaaattccaatagaaagttattt
ttaatacatggtgttacaggtagtggaaaaacagagatatacatgcatttagtaaaaaaa
ttaatagaaaaagataaggattctataattttagtaccagaaatatcactaactcctcag
atggtggaaagatttaaaggtagatttgggaaaagtatagctatatttcatagcaaactc
tctaatggtgaaagatttgatgaatggatgagagtaaaaagaggagaagttaaagtagct
ataggggcaagatcagcagtgtttttaccttttaaaaatttaggtgctataataatagac
gaagaacatgaaagtagctataaatctgatagtaatcctaaatataatgctagagatata
gcagaacttagatgcatgaatgaaggttgtaagatcattttaggatcagctacgccatct
ttggaaacttattatagaagtaaaaataaaataatagatttaatcacaataaaagaaaga
atagaaggggcatctatgccagaggttaaaatagttgatatgagagaggaacttatgtca
ggtaataaatctatatttagcagggaactatttgaagatataagtacaaggttagaaaaa
aaagagcaaataatattatttttaaatagaagaggtttttctacctttgtatcctgtaga
gaatgtgggtatgtttttaaatgtaaaaattgtgatatttctttaacctatcataataaa
gataatagcttaagatgccattattgtggagcaagcacgagaataccaaaacaatgtcct
aaatgcaatagtaaatatgtaaagtattttggagcaggtacagaaaaagtggaaaaagct
ataaaaaaatgttttcctaaagctaaaactttaagaatggatttggataccacaagaact
aagaatgcttatgaaaatatttacaatacatttaaaaagggtgaagctgatatattaatt
ggaactcaaatgatagcaaaaggattagattttgaaaatgtaactttagttggagtttta
gcagcggatatgtctttaaatttaccagactatagatcaggagaaagaacttttcagctt
ataactcaagtttcaggaagggcaggaagaggaaagaaagaaggaaaagttttaattcaa
agttataatccagaaaattatagtatagcctccgcggctaaaagtgattatgaaggattt
tataataaagagataaaaataagaaaagatatgaattatcctcccttttcaaaaatattg
cttataaatttaagcagtaaatatgaaaataaattaataaaaaatacacataaagttggt
ataatattaaagaatgttttatctaaatatgataacttaaatatgttaggtccttgtcct
agtccactatctaaaataaaagagatgtatagatggcaaataatattaaaaggaaatgtg
acgggagatataatgaaggaaatacaaaaaatagtttatacttctttagaacaagtttat
aatgatataagagtaagtatagatataaatcctaacagtttgttataa
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