Clostridium botulinum A ATCC 3502: CBO0683
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Entry
CBO0683 CDS
T00533
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cbo
Clostridium botulinum A ATCC 3502
Pathway
cbo03420
Nucleotide excision repair
cbo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CBO0683 (pcrA)
03430 Mismatch repair
CBO0683 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbo03400
]
CBO0683 (pcrA)
Enzymes [BR:
cbo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CBO0683 (pcrA)
DNA repair and recombination proteins [BR:
cbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CBO0683 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CBO0683 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
CarD_TRCF_RID
YccV-like
Motif
Other DBs
NCBI-ProteinID:
CAL82235
UniProt:
A5HZM6
LinkDB
All DBs
Position
783783..786437
Genome browser
AA seq
884 aa
AA seq
DB search
MHLDVISGLNDAQREAVTTTEGYIRVIAGAGSGKTKALTSRYIYLVHELGISTANILCAT
FTNKAAREMKKRIRTMIGDNDTGLIGTFHGFCRRLLKEDIYTINYPDNFIVMDNEDMDLV
LRIVYEDANISSKQFTFSKAKDMISKRKNKDFKYISYIIETDNNELKKKFLTSKNVEDRI
FYGYLYQQKKNYNLDFNDLIIFTLHILETFPKVRKKWQQKLEYIMVDEFQDVNIKQYRLV
SILSEYHKNLFVVGDPDQTVYSWRGANVNLILNFDKEFKGTKTIMMNQNYRSSSNIIKAS
NSLISKNKQRIDKELIPIKHGNIPVVYKHSENIYKEANWIINQIEQIIKGGNSYKNIAIL
YRAHYVSRSIEEALLKNKIPYTLYSGVEFYQRKEIKDILSYLRMVVFEDDLSFIRIINEP
KRNFGKKRMEIIRKYAEDNNCSLYSSLKINLEDKLIAKSKADKFVDLIERYKKIYKEMRI
TDLLMELLNNSGYEAMLRESGEDERLENLAELKNSISDYENSAGEDTTLEDYLQEISLFT
NSDLKENKDTINMMTLHTAKGLEFPYVFICEFNEGIFPSARTNTKEKMEEERRLAYVGYT
RAKNALFLSDAEGVNYDGSYRFPSRFIFNTGKTYLNYLVELKESLIDDANEFISDSENSM
NKSNNIKFKIGERIIHKLLGLGVIIGIDNDNSSYMIKFDNAETFRNISFSTQLDKADTNN
LDIIKSNERKAIDHLEAERLEAERKEQERLEAERLEAERKEQERLEAERLEAERKEQERL
EAERLEAERKEQERLEAERLEAERKEQERLEAERLEAERKEQERLEAEQIEVSTMILKIK
EEISELEEIVSKNKYKLFGKGAILKKEAKKRIQILYLKIDEISN
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgcatttagatgttattagtggacttaatgacgctcaaagagaagctgttaccacaaca
gaaggctatatacgtgtaattgctggagctggcagtgggaagacgaaagcattgacaagt
agatatatttatctagtacatgaattagggatttcgacagctaatattttatgtgcaact
tttaccaataaagcagcaagagagatgaaaaaacgtataaggacgatgataggtgataat
gatacaggattaattggtacttttcatggattttgcagacgtttgttaaaagaagatata
tatacaattaattatcctgacaattttatagttatggataatgaggatatggatttagta
ttaagaattgtgtatgaagatgcaaatatatcttcaaagcaatttacattttctaaagcc
aaagatatgattagtaagaggaaaaataaggattttaaatatatatcatatataatagag
acagataataatgaattgaagaaaaaatttttaacatcaaagaatgttgaagatagaatc
ttctatggttatttatatcaacaaaagaaaaattataatttagattttaatgatttaata
atatttacattgcatatattagaaacgtttcctaaggtgagaaaaaaatggcaacaaaaa
cttgaatatataatggtggatgaatttcaagatgtaaatataaagcaatataggttagtt
agtatattgagtgaatatcataaaaatttatttgttgttggagatccagaccaaacagtt
tattcttggagaggtgctaatgtaaacttaatattaaattttgataaagagttcaaggga
acaaaaacaataatgatgaatcaaaactatagatcatcatcaaatattataaaagcttct
aattcattaatttctaaaaataaacaaagaattgataaggaattaatcccaataaagcat
ggaaatattccagtggtatacaaacattcagaaaacatatataaggaagctaattggatt
ataaatcaaattgagcaaataattaaaggtggaaatagctataagaatatagctattctt
tatagagctcattatgtatcgagaagcatagaagaagctttattaaaaaataaaattcca
tatacattgtatagtggtgttgaattttatcagagaaaagaaattaaagacattttaagc
tatctaaggatggtcgtttttgaagatgacttatcattcattcgtattataaatgaacca
aaaagaaattttggtaaaaagagaatggagatcattaggaagtatgctgaagataataat
tgctcattatatagttcattgaagataaatcttgaagataagctaattgcaaaaagtaag
gcagataaatttgtagatcttattgaaagatataaaaaaatatataaagaaatgagaatt
acagatttacttatggaattattaaataatagtggttatgaagctatgttaagagaaagt
ggggaagacgaacgtcttgaaaatttagcagaactaaagaattcaatatcagattatgaa
aatagtgctggggaagatactacactagaagattatttgcaagaaatatctttatttact
aattcagatttgaaggaaaataaagatacaattaatatgatgacattacatacagcaaag
ggattagaatttccctatgtttttatatgcgaatttaatgaaggcatatttcctagcgca
agaactaatacaaaagaaaaaatggaagaagaacgtagattagcatatgtaggatatacg
agagctaaaaatgcattgtttttaagtgatgcagaaggggttaattatgacggctcatat
cgcttcccatcaagatttatttttaatacaggaaaaacgtacttaaattatttagtagag
ctaaaagaaagtcttatagatgatgcaaatgagtttattagtgattccgaaaattctatg
aataagagtaataatattaaatttaaaattggagaaagaataatacataaattgcttggg
ctaggcgttattattggcatagataatgataattcatcttatatgattaaatttgacaat
gcagaaacatttagaaatatttcattttctacacaattagacaaagctgataccaataat
ttagatattattaaatcaaatgaacggaaagcaatagatcatttggaagcggaacgatta
gaggcagagagaaaagagcaagaaagattggaagcagaacgattagaggcagagagaaaa
gagcaagaaagattggaagcagaacgattagaggcagagagaaaagagcaagaaagattg
gaagcagaacgattagaggcagagagaaaagagcaagaaagattggaagcagaacgatta
gaggcagagagaaaagagcaagaaagattggaagcggaacgattagaggcagagagaaaa
gagcaagagagactagaagcagaacaaatagaagttagtacaatgattttaaaaataaaa
gaagaaatatcagagttagaagaaatagtgtcaaaaaataaatataagctattcggaaaa
ggtgctatattaaaaaaggaggcaaaaaagagaatacaaattttatatttaaagatagat
gaaataagcaactaa
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