KEGG   Corynebacterium bovis: CBOVI_08140
Entry
CBOVI_08140       CDS       T09479                                 
Name
(GenBank) putative ATP-dependent helicase Lhr
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
cbov  Corynebacterium bovis
Brite
KEGG Orthology (KO) [BR:cbov00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbov03400]
    CBOVI_08140
Enzymes [BR:cbov01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CBOVI_08140
    5.6.2.6  RNA 3'-5' helicase
     CBOVI_08140
DNA repair and recombination proteins [BR:cbov03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CBOVI_08140
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C ResIII DUF6406 AAA_25
Other DBs
NCBI-ProteinID: WJY78127
LinkDB
Position
complement(1993010..1998079)
AA seq 1689 aa
MVTRAPAPGDSSHGDPAGDPADDPLDLFHPPVAAWFREVFTEPTAVQRAAWRAVAAGEHA
LVVAPTGSGKTLAAFLWALSRLSPGGFLQHTDGGDDPGPGAGAGAGRGTTPRSGRSGRTP
GSGTRVLYISPLKALGVDVDRNLAVPLAGIARTAEATGDDVAPVRVGVRSGDTPAAERAR
LLRTPPEILITTPESLYLMLTSKAAGTLRDVDTVIVDEIHAVAGTKRGSHLALSLERLEA
VTGAPVQRIGLSATVNPVDTVAAFLGGDRPVTVVNPPAHKAWDVHVRSVVEDFRDPPGID
GEGAGDGAGDGVEVGDGDPPVDDALVGPTLIGEGVGGATPPGSGRRVASGVDRESALPTQ
RSVWPHVQRAVYGRITRHRSTLVFVNARRTAERLTGALNEMWAEEHDPDALAAPTRRDPA
QVMAQSARVPGAPAVIARAHHGSVSKDERADIEAALKSGELRCVVATSSLELGIDMGLVD
HVIQVGAPPSVSAAVQRFGRAGHTVGAVSSGTVYPLHRQDAEIATVVVDRMLAGDLEPVE
VVTNALDVLAQQTVAVTAQAAVVAGLDGDDGDGDDGDGARAGTVAVEDWFRRVRRAHPYA
ALPREAFDGVVDLVSGRYPSTDFAGLRPRVVYDPVAGTLEARPGAQRLAVTSGGTIPDRG
MFGVFLATGDDGGTGGAGGTGGRRVGELDEEMVYESRVGDVFTLGASSWRITDITRDRVV
VVPAAGHTGRLPFWTGDGEGRPAGLAAVIGRCRRAWGRGGDGDLRDAPFLDDNTRANLDS
FYASQRETTGTVPDDRTLLVERFRDEVGDWRVVVHSPYGRGVNAPWALALGVELERRSGI
DAMPVAGDDGIVLRLPYTEEPPGVELLTGVGDDAGAPADLVLGDVTGAVGGSALFAARFR
ECAARSLLLPRRSPGARQPLWQQRQRAAQLLDVARQHPEFPVMVETMRECLHDVYDLDAL
ARLVTAAAGAAAGAAGGRVRVAEVTTDTPGEFARSLLFSYTGAFMYEGDSAERSAALAVD
PALLAAVLGRSGGGLVLDADVVADTVAALQWLADGRRARSAEQVVDMLRELGPLTPEEVE
RRCDGDAAARAATLDAVRAMIPRRVCAVRVGGTGRLAVVEDAPLLRDGLGVPVPPGVAAD
TGTVRDAVDQLLLRWARGRGPFTAAEAAAEFGLGVATAGAVLRRWVQGRRLESGVFEVGG
DTGGAGEGPGEGTTRFVDVAVLRRLRAATLARARGALDPVSPQTYAEFVASWHGLGQCTR
DELPGVLEQLAGCALPASAWETVVLPARIPDVRPADLDDLLATGEVLAVGAGTAGTDDPL
VMLLPADLAPVLLPEPGEGTAVGPLAAAVHGHLRGGGAFLAAEVTRALGADADHAAVDDA
LWELFDAGLVTPDSFAPLRARLAGVGRPGSGTRAGSAHRAPRRGRDRGRGAGRLRMGRTT
FAQTVRSEEVRARREAMNAHAGAPGRWSAAPEPSTSAADRAVAQGEAWLDRYGVVTRGSI
VAEHAEGGFAQVYRTLSAWEDSGAVLRGYVVDGLGGAQFASRGVIDQLRRTEDSRSGGDT
PPVLLAAADPANPFGAALPWPASGSTPTRGAGALVVLSRGRCLAHLTRGGRTVTVFGPPS
FDDAAPGDDAVPAEDVATVVGVLADAVRAGRVSPVTVERLNGRDVMEADTRAWVAAGARL
TPKGLSVRG
NT seq 5070 nt   +upstreamnt  +downstreamnt
atggtcacacgagccccggcccccggtgacagctctcacggtgatccggcgggcgacccg
gcggacgatccgctggacctgttccacccgcccgtcgcggcgtggttccgcgaggtcttc
acggagccgacggccgtccagcgggccgcgtggcgggccgtcgcggcgggggagcacgcg
ctcgtcgtcgccccgacggggtcgggcaagaccctcgccgccttcctctgggccctgtcc
cggctgagtccgggcgggtttctccagcacaccgacggtggggacgaccccggaccgggg
gcgggggccggtgcggggagggggacgacgccgcgctccgggcggtccgggcgcaccccc
gggtcggggacgcgggtgctgtacatctcgccgctgaaggccctcggcgtggacgtcgac
cggaacctcgccgtgccgctcgcgggcatcgcgcggacggcggaggcgacgggcgacgac
gtcgcacccgtccgggtgggggtgaggtcgggggacacccccgccgcggagcgggcgcgg
ctgctgcgcaccccgcccgagatcctcatcaccacccccgagtcgctctacctcatgctc
acctcgaaggcggcggggacgctccgggacgtcgacaccgtcatcgtcgacgagatccac
gccgtcgccgggacgaagcgcggcagccacctcgcgctgagcctcgaacgcctcgaggcc
gtgacgggggcgcccgtgcagcgcatcgggctgtccgcgacggtcaacccggtggacacg
gtcgcggcgttcctcggcggcgaccggccggtgaccgtcgtcaaccccccggcgcacaag
gcgtgggacgtccacgtgcggagcgtcgtcgaggacttccgggacccgcccgggatcgac
ggcgagggtgccggggacggtgccggggacggggtggaggtcggggacggggacccgccg
gtcgacgacgcgctcgtcggccccaccctcatcggcgagggcgtcggcggggcgacccct
cccggcagcgggcgacgcgtggcctccggggtggaccgggagtccgccctgcccacgcaa
cgctccgtgtggccgcacgtgcagcgggccgtctacgggcggatcacccggcaccgctcg
acgctcgtgttcgtcaacgcccggcgcaccgccgaacgcctcaccggcgcgctcaacgag
atgtgggccgaggagcacgacccggacgcgctcgccgcgccgacccgccgcgaccccgcg
caggtcatggcccagtccgcgcgggtgcccggggcgccggcggtcatcgcccgggcgcac
cacgggtccgtgtcgaaggacgaacgggcggacatcgaggccgcgctgaagtccggggag
ctgcggtgcgtcgtcgcgacgtcgagcctcgagctcggcatcgacatggggctcgtcgac
cacgtcatccaggtcggggccccgccgtcggtgtccgcggcggtgcagcggttcggccgc
gccgggcacaccgtcggcgcggtgtcctccggcacggtgtacccgctgcaccggcaggac
gcggagatcgcgacggtcgtcgtcgaccggatgctcgccggcgacctcgaacccgtcgag
gtcgtcaccaacgcgctcgacgtgctcgcccagcagaccgtcgccgtcaccgcgcaggcc
gccgtcgtcgcggggctcgacggggacgacggggacggggacgacggggacggggcgcgc
gccggcacggtcgcggtcgaggactggttccgccgcgtccgccgcgcccacccctacgcc
gccctgccccgggaggcgttcgacggcgtcgtcgacctcgtcagcggccgctacccctcg
accgacttcgccgggctccggccccgcgtcgtctacgaccccgtcgccgggaccctcgag
gcccggcccggcgcgcaacggctcgccgtgacctccggcgggacgatccccgaccgggga
atgttcggcgtcttcctcgccaccggggacgacggcggcaccggcggggcgggcggcacc
ggcggccggcgggtcggcgagctcgacgaggagatggtctacgagtcgcgcgtcggcgac
gtcttcaccctcggcgcgtccagctggcgcatcaccgacatcacccgcgaccgggtcgtc
gtcgtccccgccgcgggccacacgggccgcctgccgttctggaccggcgacggcgagggc
cgccccgccgggctcgccgccgtcatcggccgctgccgccgcgcctggggccggggcggc
gacggcgacctgcgggacgccccgttcctcgacgacaacacccgggccaacctcgactcc
ttctacgccagccagcgggagaccaccgggaccgtgcccgacgaccgcacgctcctcgtc
gaacgcttccgggacgaggtcggggactggcgcgtcgtcgtccactccccgtacggccgg
ggcgtcaacgcgccgtgggccctcgcgctcggggtggagctcgaacgccgctccgggatc
gacgccatgcccgtcgccggggacgacgggatcgtcctgcggctgccgtacaccgaggag
ccgcccggggtggagctcctcaccggggtcggggacgacgccggcgcccccgcggacctc
gtcctcggcgacgtcaccggcgcggtcggcgggtcggcgctcttcgccgcccggttccgc
gagtgcgccgcccggtcgctcctgctgccccgccgcagccccggggcgcgtcagccgctg
tggcagcagcggcagcgggccgcccagctgctcgacgtcgcccggcagcacccggagttc
cccgtcatggtcgagacgatgcgcgaatgcctccacgacgtctacgacctcgacgccctc
gcccggctcgtcaccgccgccgccggggccgccgccggggccgcgggcgggcgggtgcgc
gtcgccgaggtcacgaccgacacccccggcgagttcgcccggtccctcctgttcagctac
accggcgcgttcatgtacgagggggactccgcggaacgctccgccgcgctggccgtcgac
ccggcgctgctcgccgcggtgctcggccggagcggcgggggactcgtcctcgacgcggac
gtcgtcgcggacaccgtggccgccctccagtggctcgccgacggccggcgggcccgctcc
gccgagcaggtcgtcgacatgctccgcgaactcgggccgttgaccccggaggaggtggag
cgccgctgcgacggcgacgccgccgcccgtgccgcgaccctggacgcggtccgggcgatg
atcccgcgccgggtgtgcgcggtgcgggtcggcgggaccgggcggctggccgtcgtcgag
gacgcgccgctgctccgcgacgggctcggcgtgcccgtgccgccgggggtcgccgcggac
acggggaccgtccgggacgccgtcgaccagctgctcctgcggtgggcgcgcggccggggg
ccgttcacggccgccgaggccgcggcggagttcgggctcggggtggccacggccggggcg
gtgctgcgccggtgggtgcagggacgacgcctcgagtccggggtgttcgaggtcggcggg
gacaccggcggggcgggggagggacccggggaggggacgacgcggttcgtcgacgtcgcc
gtcctccggcggctccgcgcggcgacgctggcccgcgcccggggtgcgctcgacccggtg
agcccgcagacctacgcggagttcgtcgcgtcctggcacggcctcggccagtgcacccgg
gacgagctgcccggcgtcctcgaacagctcgccggctgcgccctcccggcgagcgcgtgg
gagaccgtcgtcctccccgcgcggatcccggacgtccggcccgcggacctcgacgacctc
ctcgccaccggggaggtcctcgccgtcggcgcgggcaccgcggggacggacgacccgctg
gtcatgctcctgcccgcggacctcgccccggtgctcctgccggagccgggggagggcacg
gccgtcggcccgctcgccgcggcggtccacggacacctgcgcggcgggggcgcgttcctc
gccgcggaggtcacccgggcgctcggcgcggacgccgaccacgccgccgtcgacgacgcc
ctgtgggagctcttcgacgccgggctcgtcaccccggactccttcgccccgctccgcgcg
cggctcgccggggtgggccgtccggggtcgggcacgcgcgccggcagcgcccaccgcgcg
ccgcgccggggccgggaccggggccgcggggccgggcgcctgcgcatgggccgcacgacg
ttcgcccagaccgtccgctcggaggaggtgcgggcccggcgggaggcgatgaacgcgcac
gccggcgcgccgggccgctggtcggccgcgccggagccctcgacctccgccgccgaccgg
gccgtcgcgcagggggaggcgtggctcgaccgttacggcgtcgtcacccgcggctcgatc
gtcgccgaacacgccgagggcgggttcgcgcaggtctaccgcacgctctccgcgtgggag
gacagcggcgcggtgctgcgcgggtacgtcgtcgacgggctcggcggggcgcagttcgcc
tcccgcggggtcatcgaccagctgcggcgcacggaggactcccggtccggcggggacacg
cccccggtgctcctcgccgccgccgacccggcgaacccgttcggggcggccctgccctgg
ccggcgtccgggtcgacgccgacgcggggcgcgggggcgctcgtcgtcctctcccggggc
cggtgcctcgcccacctcacccggggcgggcggacggtgaccgtcttcggcccgccctcc
ttcgacgacgccgcaccgggggacgacgccgtgccggcggaggacgtggcgaccgtcgtc
ggggtgctcgccgacgcggtgcgggcggggcgggtctccccggtgacggtggagcggctc
aacggccgggacgtcatggaggccgacacccgggcgtgggtcgccgccggggcgcggctc
acgccgaaggggctgagcgtgcgcgggtga

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