Caenorhabditis briggsae (nematode): CBG_02108
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Entry
CBG_02108 CDS
T01054
Symbol
Cbr-fox-1
Name
(RefSeq) Protein CBR-FOX-1
KO
K14946
RNA binding protein fox-1
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbr03041
]
CBG_02108 (Cbr-fox-1)
Spliceosome [BR:
cbr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
CBG_02108 (Cbr-fox-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
8585863
NCBI-ProteinID:
XP_002643870
UniProt:
A8WS01
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All DBs
Position
X:4340319..4345629
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AA seq
433 aa
AA seq
DB search
MQALYQISANGGGGAGQQNQQIPIGLGNSLLYQQLAAQQQIAAQHQQQLAVSAAHQSQNN
IMLATSAPSALINHMENPTEAKVKDDPNADYDLQLSIQQHMAAAAHAAQAAQAAQMAPQM
GQTQIGPQIVGQPGQPVVAAVTTAAGTTNGTSAVTQPDPSTSSGPDGPKRLHVSNIPFRF
RDPDLKTMFEKFGAVSDVEIIFNERGSKGFGFVTMERPQDAERARQELHGSMIEGRKIEV
NCATARVHSKKVKPTGGILDQMNPLMAQSALAAQAQMNRALLLRSPLVAQSLLGRGAGLI
PGIQQPAAAFQLQAALAANPLAQLQGQPLLFNAAALQSNALQQSAFGMDQAAVQAALLAN
EQARLLAAAAAAQGNEYLMYHQAKQQELSGRIPSSGNGTAFGEQYLGNALSAGSLPSYQI
NPSLRTLNRFTPY
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcactgtaccaaatatcggccaacggcggcggcggcgcgggacaacaaaatcag
cagatcccaattggccttgggaattcgttgctctaccaacaattggctgcacaacaacag
attgccgctcaacaccaacagcagctagcggtttcagcagctcatcaatcacaaaacaac
ataatgcttgctactagcgctccatcggcgctaatcaaccatatggagaatccgacggaa
gccaaagtcaaggacgatccgaacgctgactacgatttgcaactttcgattcagcagcat
atggctgctgctgctcatgctgctcaggccgcgcaagcggctcaaatggctccacaaatg
ggccaaacacaaattggcccacaaatcgttggacaacctggacaaccggtggtagccgcg
gtcaccactgccgccggcaccacgaacggcacatcggcagtcacacagcccgatcccagc
actagctctggaccagatggaccgaaaagattgcacgtctcgaatatcccattcagattc
agggatccggatcttaagacaatgttcgagaagttcggagcggtttctgatgtagaaatt
attttcaatgagcgtggctcaaagggatttgggtttgtcactatggaaagacctcaagac
gcggaaagagcacgtcaggaacttcatggatcgatgattgagggtagaaagattgaagtt
aattgtgccactgctagagttcattctaagaaagtgaagccaactggaggaatcctagac
caaatgaacccacttatggcccaatctgctctagctgctcaggcccaaatgaacagagct
ttgctattaagatcccctctcgttgctcagtccctacttggaagaggagcaggattgatc
cctggaattcaacaaccagctgccgcattccaacttcaagctgctctagcagcaaatcca
ttggctcagctacaaggtcaaccgcttcttttcaatgccgccgctctccaatccaatgca
ctacaacagtcagcctttggaatggatcaagccgccgttcaagctgctctcttagccaat
gagcaagctcggttactggctgctgccgccgctgctcaaggtaacgagtacctaatgtac
catcaagccaaacaacaagaattgtcaggacggattccatcgtctggaaatgggaccgcg
tttggagagcaatatctgggaaatgcgctgtccgctggctcacttccttcatatcagatc
aatccgtcgctgagaactttgaatcgtttcacaccatattga
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