Caenorhabditis briggsae (nematode): CBG_04013
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Entry
CBG_04013 CDS
T01054
Symbol
Cbr-pgp-2
Name
(RefSeq) Protein CBR-PGP-2
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CBG_04013 (Cbr-pgp-2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbr02000
]
CBG_04013 (Cbr-pgp-2)
04147 Exosome [BR:
cbr04147
]
CBG_04013 (Cbr-pgp-2)
04090 CD molecules [BR:
cbr04090
]
CBG_04013 (Cbr-pgp-2)
Enzymes [BR:
cbr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
CBG_04013 (Cbr-pgp-2)
Transporters [BR:
cbr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
CBG_04013 (Cbr-pgp-2)
Exosome [BR:
cbr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CBG_04013 (Cbr-pgp-2)
CD molecules [BR:
cbr04090
]
Proteins
CBG_04013 (Cbr-pgp-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
ABC_ATPase
RsgA_GTPase
AAA_22
AAA_15
AAA_29
AAA_16
AAA_30
AAA
APS_kinase
AAA_5
PRK
G-alpha
AAA_14
DUF815
Rad17
AAA_28
MMR_HSR1
ECH_2
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
8581414
NCBI-ProteinID:
XP_045092554
LinkDB
All DBs
Position
I:4552731..4561851
Genome browser
AA seq
1305 aa
AA seq
DB search
MGKDTERTPLLLSSAEFRKSQTSLNSHSSDSSIDESTVKLTNYGLFSYTRGKDLILLIVG
TIAAVIHGAGFPLLAIVLGGMTTVFLRAQNSDFVVGVGNVNPNGLEPISIDEFNSEVVKY
CIYYLILGVAMFVTSYVQIACFESYAENLVHKLRQNYLKAILRQQIQWFDKQQTGNLTAR
LTDDLERVREGLGDKFALLVQMFAAFLAGYGVGFFYSWSMTLVMMGFAPLIVLSGAKMSK
SMATRTKVEQETYAVAGAIAEETFSSIRTVHSLNGHKRELDRFWNALENGRKTGIVKYCY
MGIGVGFSNLCMYSSYALAFWYGSTLIINDPTFDRGLIFTVSVELESRFFYPEFTNWGNG
ILGKVVLVVSIFEVFFAVLSGSTSLGGALPHLASFGTARGAAYTVLRVINSHPKIDPYSL
EGLLVDNMKGDISFQNVHFRYPSRKDIPVLKGISLEVKSGEKIALVGSSGCGKSTIVNLL
QRFYDPTKGKVSIDGVDLKEINVHSLREQIGIVSQEPVLFDGTIYENIKMGNEHATHDQV
VEACKMANANDFIKRLPDGYGTRVGEKGVQLSGGQKQRIAIARALVKNPKILLLDEATSA
LDTEAEREVQAALDQAQAGRTTLIVAHRLSTIRNVDKIFVFKAGNIVETGSHEELMNKQG
VFYDMTQAQVVRQQQQEAGKDIEDTISESAHSHLSRKSSTRSAISMATSIHQLAEEVEEC
KAPPTPISKIFNFNRDKIWWFIGGMFGAFIFGSVTPVFALVYAEIFNVYSEPVEQMQSDV
YFWCGMFVLMGITFFIGFFISANCLGRCGESLTMKLRFEAFKNLMRQDIAFYDDLRHGTG
KLCTRFATDAPNVRYVFTRLPVVLASIVTILGALGIGFYYGWQLALILVVMVPLLVMGGY
FEMQMRFGKQIRDTQLLEEAGKVASQAVEHIRTVHSLNRQEQFHFTYCEYLREPFNTNLK
HAHTYGAVFAFSQSLIFFMYAVAFYLGSIFVNQHSMQPIDVYRVFFAISFCGQMIGNTTS
FIPDVVKARLAASLLFYLIEHPTPIDSLSEAGIVKPITGNISIRNIFFNYPTRKETKVLQ
GFTIDIKPGQTVALVGHSGCGKSTIMGLLERFYNQDKGMIMIDGDNIRNLNISSLRQQVC
IVSQEPTLFDCTIGENICYGTNRNVTYQEIVEAAKMANIHNFILGLPDGYDTHVGEKGTQ
LSGGQKQRIAIARALVRSPSVLLLDEATSALDTESEKIVQEALDAAKQGRTCLVIAHRLS
TIQNSDVIAIVSEGKIVDKGTHDELMRKSEIYQKLCETQRIVESQ
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggatacggaaagaactccacttctcctctcaagcgcagagttccggaagagt
caaacaagtttaaactcccattcaagtgattcctccatcgatgagtctactgtcaagctc
acaaactatggattgttctcgtacaccagaggcaaagatctcattcttctcattgttgga
accattgcagcagtcattcatggagctgggtttccacttcttgccatcgttctcggagga
atgacaaccgttttcttacgtgctcaaaactcggattttgtcgttggagttggaaatgta
aacccgaatggattggaaccgatctcgattgatgaattcaattcggaagtcgtcaagtat
tgcatctattatctgattcttggagttgcgatgttcgtgacttcatacgtgcagattgct
tgtttcgaatcgtacgctgaaaatcttgtacacaaattgagacagaactatctgaaggca
attctgagacaacagattcaatggttcgacaaacaacaaactggaaatttgacagcaaga
ctgacagatgatttggagcgtgtccgagaaggattaggagacaaatttgctcttttggtc
caaatgtttgctgcttttctagctggatacggagtcggattcttctatagttggtcgatg
actcttgtcatgatgggtttcgctccattgattgtgctttctggagccaaaatgagcaag
agtatggcgacacggacaaaagtggaacaggagacgtacgcggtggctggagctattgct
gaggaaacattctcttcaattcgaactgttcactctttgaatggacataaaagagagttg
gatcgattctggaatgcattagaaaatggaagaaagactggaatcgtgaagtattgttac
atgggaattggagttggattcagtaatttgtgcatgtattcttcgtatgctctggcattc
tggtatggaagtacactcattataaacgatccaacattcgacagaggactgatttttact
gtaagtgttgaactggaatctaggtttttctatccggaatttacaaattggggaaatggc
attttggggaaagtagttttggtagtttcgattttcgaggtcttcttcgccgtgctttcc
ggttccacttctcttggtggtgctcttccccatctggccagttttggaactgctcgtgga
gctgcttatactgtccttcgtgtcatcaattctcacccaaaaatcgatccatattccctt
gaaggacttctcgttgacaatatgaaaggagacatctcatttcaaaatgttcatttccgt
tatccatctcgaaaagacattccagttttgaaaggaatctctcttgaagtgaaatctggc
gaaaaaattgcattggttggatcgagtgggtgtggaaaatcgacaatcgtcaatcttctt
caacggttctatgatccaacaaaaggaaaagtttcgattgatggagtcgatttgaaagag
attaatgtgcacagtctccgtgagcaaattggaattgtcagccaggaaccagtgttgttt
gatggaacaatttatgagaatatcaagatgggaaacgagcatgcaactcatgatcaagta
gtggaagcatgtaaaatggcaaatgcaaatgacttcattaaaagattaccagatgggtac
ggtactagagttggagagaaaggagtacaattgagtggaggacaaaaacagagaatcgct
attgctcgtgccctcgttaagaatcccaagatccttctactcgacgaagcaacatctgct
cttgacacagaagctgaaagagaagtgcaggcagctctcgatcaggcgcaagcaggaaga
actactctaatcgtggctcatcgtttgagcacaattcgaaatgtggataagattttcgtg
ttcaaggctggaaacattgttgaaactggaagccacgaagaattgatgaacaaacaagga
gtgttctatgatatgactcaagcacaagtggtccgacaacagcaacaggaagccggaaag
gacattgaagacactatctcggaatcagctcattcccatctcagcagaaaatcttctacg
agaagtgcgatttccatggcaacatcgattcatcagctggcggaagaagttgaggaatgc
aaagctccaccaactccaatttcaaagatcttcaacttcaatcgagacaaaatttggtgg
ttcattggtggaatgtttggtgcattcatctttggttcggttactccagtgtttgctctt
gtttatgccgaaatctttaatgtttactctgaaccagtcgaacaaatgcaatctgatgtc
tatttctggtgtggaatgtttgtgttgatggggatcacttttttcattggattcttcatt
tctgcaaattgcctcggacgatgcggagagtcactgacaatgaaattgcgatttgaagca
ttcaagaaccttatgagacaagatatcgcattctatgatgatctgagacatggaactgga
aaattgtgcactagatttgctactgatgctccaaatgtcagatatgtattcactcgttta
ccagtggtcctcgcttcaatagttactattttgggagctctgggaatcggattctattat
ggatggcaactggcattgattcttgttgtgatggtacctcttctcgtaatgggtggatac
tttgaaatgcaaatgagatttggaaaacaaataagagatactcaactactggaagaagct
ggaaaagtggcatctcaggctgttgaacacatcagaacagttcattctctcaatcggcaa
gaacagttccatttcacatattgtgaatacttgagagaaccattcaacacgaatttgaag
catgcacacacctacggagcagtcttcgccttctcacaatctctgatcttcttcatgtac
gcagttgcattctatctcggaagcatttttgtgaatcaacattcaatgcaaccaattgat
gtctatcgtgtattctttgcaatttcattctgtggacaaatgattggaaacacgacttct
ttcattccggatgtcgtcaaagctcgtctcgctgcttctcttctcttctacctcatcgaa
catccgactccaattgattctctttctgaagctggaattgtaaaaccaatcactggaaat
atttcaatccgaaacatctttttcaattatccaacaagaaaggaaactaaagttttgcaa
ggattcacaatagatatcaagccaggtcaaactgttgcccttgttggacactctggatgt
ggaaagtcaacgattatggggcttttggagagattctataatcaggataagggaatgatt
atgattgacggtgacaatatccgaaacctgaacatcagttctctccgacaacaagtctgt
atcgtcagtcaagagccaacactttttgattgtacaattggagaaaacatatgttatgga
acaaaccgaaatgtcacatatcaggagatcgtggaagctgccaagatggctaacattcat
aatttcattcttggattgccagatggctatgatactcatgttggagagaaaggaactcaa
ttatcgggtggtcagaaacaaagaattgccattgcgagagcgttagttcgatctccatca
gtactgcttcttgatgaggctactagtgctttggatacggaatctgaaaagattgtacaa
gaggctctcgacgccgccaaacaaggacgcacatgtcttgtgatcgctcacaggttgagc
acaattcagaatagtgacgtcatcgcaattgttagtgaaggaaaaatcgtagacaaagga
actcatgatgaattgatgaggaagagcgaaatctatcagaaattgtgtgaaacacagcga
attgtcgaaagccaataa
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