Caenorhabditis briggsae (nematode): CBG_06129
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Entry
CBG_06129 CDS
T01054
Symbol
Cbr-sec-24.1
Name
(RefSeq) Protein CBR-SEC-24.1
KO
K14007
protein transport protein SEC24
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CBG_06129 (Cbr-sec-24.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbr04131
]
CBG_06129 (Cbr-sec-24.1)
Membrane trafficking [BR:
cbr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
CBG_06129 (Cbr-sec-24.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
8575375
NCBI-ProteinID:
XP_045093063
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All DBs
Position
IV:8696531..8700568
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AA seq
1160 aa
AA seq
DB search
MAYQSPQYGQPPGNPQQQFNPNQQFQQNGFPQPGQQKTVQAPGGFPPQPVPQQQPNGGFY
QNGAANGTQSYAQPPGPVPQLTQSVQSMSLGPRASPAPQLGQPAQQMGGYPGAPTAVPPQ
AQFPGQQTPQFNGPPQNASQISQAPPSNTAPQQAPIPVQNSTSSGSSVNQMPTAPSFHGG
PPQTGVPGGPGGPGAPQPPHQIQQPASLRPQAPGYPPAPGVPNFQPGVAPSQPTPNNYPG
MPQPTPGNYPGAPAAGLQQGPQGNYPGAQPATQQGAPRGFPPGPSPPGAFPPVPGAPSNF
PPGGPAMPGAFPPAPQGPSAFPPGASGAYPQGPNVPGQYPQVPGAAGTFPQGPGVPGGFP
QAPGAPGMPGMPGGYPGGPPQQRQQRLDPNMMPSAVQVIDEDSARSGIFPTGYPHAELPP
LVSTFSFAQDQGNCNPKFMRSTLYTAPQTNDILKASQIPLAVVISPFAPLNEYEVKEPPV
VDLGPQGPIRCQRCKAYICPFMEFQDGGRSFRCPFCHARTSVEDAYFAHLDHTGRRTDIE
MRPELCLGAYDLVATKQYCKNGLAPKEPAFIFMIDVSYNALSNGMLPILCQNLEKVLRNL
PRETGQLESSIRVGLATFDQAVHFFDISSASPKMLVMSDVLEPFVPMVDGLLLPYNDALP
GLRAALAEIPKIFAQSKTTETILQPVVQAGLDALKCADRAGKLIVFSTVLPTFDAPGKLK
SKNDRSLLGTDKEKTALVPQEESYTKLGEQCVKSGVTVDMFLFPNAFIDVATIGQLSAVT
GGSVFKFQYFSADKDGVRMLNELERHVSKKIAFDCMARVRTSTGIRPITFSGSFYMENST
DLELATIDESKAFITEIKHDDTLKDQASLIQTAVLYTSMTGQRRLRILNMCLPVTADYNQ
VYKLADPEALTTFMLKQAVQLNRDRGSSEMKESLSSRCAQFLATYREKCSEGAPLGQLIL
PESLKLMPLYVNSILKNDAISGGSEMTVDDKVWQMELIRGMRTEDVMPLIYPRVMPVSDL
RLNDGEEMEELPKPVRAGSDFLDNSKAYIIDNGIVLFVWVGALCPQQWIQDVFGVGAANQ
IDTESGTIPEKDNSHSRALRRAIQCLPRGIRQRKTFVVVEKTGLEPWMKKFLVEDKSGAS
NMSYVDYLVDIHRKIRDLIS
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccaatcgccacaatatggccagccacctggtaatcctcaacagcaattcaac
ccaaatcaacagtttcagcagaatggattccctcagccaggccagcagaaaactgttcaa
gctcctggaggcttccctcctcagcctgttccacagcaacaaccaaacggaggtttctat
cagaatggtgctgctaatgggacacaatcctacgcacaaccaccgggaccagttcctcaa
ttgactcagtctgtacaaagcatgtcattgggtccaagagcttcacctgcgccacaactt
ggtcaaccggcacagcaaatgggaggatatcctggagcaccaacggctgtcccaccacaa
gcacaatttccgggacaacagacaccgcagtttaatggaccacctcaaaatgcttcacaa
atttctcaagctccaccatccaacacggcaccccaacaagctccaatacctgttcaaaat
tcgacaagtagtgggtcgtcagttaatcaaatgccgacagcacccagtttccatggaggg
ccaccacaaactggagttccaggaggaccaggaggaccaggagctcctcaaccaccacat
caaattcagcaaccagcttcattgcgaccacaagctccaggatatccaccagctccggga
gtgccaaacttccaacctggcgtagcaccttcgcaacccaccccaaataattacccagga
atgccgcaaccgactcctggaaattatcctggagctccagccgcgggacttcaacaaggt
cctcaaggcaactatccaggtgcacaacctgctacacaacaaggagctcctagaggtttt
cctcctgggccaagtcctccaggggctttcccaccagtaccaggagcgccttcaaatttc
ccaccaggaggtcctgccatgcccggagctttcccaccagctcctcaaggtccatccgcc
tttccaccaggagcatcaggagcatacccgcaaggtcctaatgtaccaggacaatatccg
caagtacccggagcagctggtacgtttccacagggacctggagttcctggcggctttcca
caagctcccggagctccgggaatgcctggaatgcctggcggttatcccgggggtccacct
caacagagacagcagagacttgatccaaacatgatgcctagtgcagttcaagtgattgat
gaagattccgctcgctccggaatatttccaacaggatatccgcatgctgagctacctcct
ctcgtttccactttttcatttgcccaagatcaaggcaactgtaatccgaagttcatgaga
tcaacattgtacacagcccctcagaccaacgacatcctgaaagcttctcagattcctctc
gctgtcgtcatttcaccattcgctccattgaacgaatatgaggtaaaggaaccaccagtt
gttgatttgggaccacagggtccaattcgttgtcaacgttgtaaagcatacatttgtcca
ttcatggaattccaagatggtggccgttccttccgatgcccattctgtcatgctcgaacc
tctgttgaagatgcgtactttgctcatctcgatcatacaggaagacgtaccgatattgaa
atgagacctgaattgtgtctaggagcgtatgatcttgttgccacaaaacagtactgcaag
aacggactggctccaaaagaacctgcattcattttcatgatcgacgtttcgtataatgcg
ctttcaaacggaatgttgccaattttatgtcagaatttggaaaaagttcttcgtaatctt
ccgagagaaactggacaactcgagtcatcgattcgtgttggattagcaacttttgaccaa
gctgttcactttttcgatatttcttcagcttctcccaagatgcttgtcatgtcggatgtt
ctcgagcctttcgtaccgatggtggatggacttcttcttccgtacaacgatgccctccca
ggacttcgagctgctcttgctgaaattccgaaaattttcgcccagtctaagacgacagag
acgattcttcaaccggtagttcaagctggtcttgatgctttgaagtgtgctgatcgtgcc
ggaaaactcattgttttttcgactgtacttccaacgtttgatgcacccggaaaactcaaa
tcgaaaaatgatcgctctttactcggaactgacaaggaaaagacagcactcgttccacaa
gaagaatcatacacgaaactaggagaacaatgcgtcaaatccggtgtaactgttgatatg
ttccttttcccgaatgctttcatcgacgtcgctaccattggacaactttccgcagttact
ggtggctctgtattcaagttccagtacttttcggccgataaagatggtgttcgtatgttg
aacgaactggaaagacatgtgtccaaaaaaattgctttcgattgtatggcaagagttcga
acatctactggcatccgtccaatcactttctctggttctttttatatggagaactctacg
gatttggagttagcaaccattgatgaaagcaaagcatttatcacagaaatcaaacacgac
gatactttgaaggatcaagcttccctaattcaaacagctgttttgtacacttcgatgact
ggtcaacgacgtctcagaattctcaacatgtgccttcctgtcacagcagactataatcaa
gtgtacaaactcgcggatcctgaagctctcacgactttcatgctaaaacaggctgttcaa
ctcaaccgcgacaggggtagctccgaaatgaaggaatcgctttcatcacgatgtgcacag
tttttggcaacgtatagagaaaaatgcagtgaaggtgctcctcttggacagttgattctt
cccgaatcgctgaaactgatgccactttatgtgaactcaattctcaaaaatgatgcgatt
agtggtggaagcgaaatgactgttgacgacaaagtttggcaaatggaactgatacgtgga
atgcgaacggaagatgtgatgcctctcatttacccaagagtgatgcctgtttcggacctg
agattgaacgatggagaagaaatggaagaacttccgaagccagtcagagctggttctgat
ttcctagacaattctaaagcgtatatcatcgataatggtattgttttgttcgtttgggtt
ggtgctttgtgcccacagcaatggattcaagatgtgttcggagttggagctgcaaaccaa
attgacaccgaaagtggtacaatacctgaaaaagacaattctcattcgcgggcccttcgt
cgagcaattcagtgtttgccgcgcggaatccgacaacggaaaacatttgttgtagttgag
aagactggcttagaaccgtggatgaagaagttcttggttgaagacaaatctggagcctca
aatatgtcatacgtggattatcttgtggatatccatcgcaagattcgtgatcttatttcc
tga
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