Caenorhabditis briggsae (nematode): CBG_06886
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Entry
CBG_06886 CDS
T01054
Name
(RefSeq) Protein CBG06886
KO
K23340
transmembrane and ubiquitin-like domain-containing protein
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbr04121
]
CBG_06886
Ubiquitin system [BR:
cbr04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
ERAD complex
CBG_06886
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
YajC
Dsc3_N
Rad60-SLD
MscS_TM
Motif
Other DBs
NCBI-GeneID:
8584464
NCBI-ProteinID:
XP_045093335
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Position
III:complement(10246418..10248888)
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AA seq
583 aa
AA seq
DB search
MSTLILSTTIFAVVVLIVCGFISYQISSRRPLYYNLFVVEMHTWTSRRMVQVLHLGQEFT
PPVTWDRLVQRMRARAPRIQGENRIAISDTNIVIQSPNTVIDSPAPARSPDVDLITLWDI
EMPPPSAGHVPDATRDSQYAAAAAIAILARGDDASLMSRVFRNQERMTRGDAGIAPTLEE
RMNPRHDYVTTDVTYTTPSINPDLRHQISTTTSNVTAPREAHNDNLEPEIVVIDDMETSS
ENGMDEEEEVEEEEVEDADDSGLAVNAPIEETEEERERKAERDAEMSVLEGPSEGKILIR
LKFLSDTEKDTYASLQDTVAKFKVEHFTDLSNKVIRLIFQGQLLREDSRTLESYGLQAGS
VMHCHISIIPLSRPGVANMTPIVHDSEPRRRIRRSQRTLRDPTPIPPQGIQNALDRAIQE
QLARNRAAQDRNVGQIYLLLSTMVPILSGIGLAFFRPDRIRDLLRPATLLTISQWVCNLL
VDNGLLEQENEEQEQQREEVQQTHLQTSTLFYIFGGQMIAVSIFLYYFPDVFDRVGFSIF
VIVFLYFVFVVYSRQRRRRPTRSQAQNEIMIEDQIVQETISLL
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtccacactcatcctatcaaccacaatattcgccgtagtagttttaatagtatgcggt
tttatatcatatcaaatttcgtctcgaagacctttatactataatttattcgtcgtcgaa
atgcacacatggacgtcgcgcagaatggttcaggtgttacatttgggtcaggagttcaca
ccgcccgtcacatgggatcgtttagtacaacggatgcgtgcaagagctccacgtattcaa
ggagagaaccgaatcgcgatttctgacacaaatatagtgatacagtctccgaatactgta
attgattctccagcacctgcgaggtccccagatgtcgacctaatcacattatgggatatc
gaaatgccgccaccaagtgctggtcacgtgccagatgctactagggacagtcagtatgct
gcagcagcagcaatcgctattttagcaagaggagatgacgcctctctgatgtctcgagtg
ttcagaaatcaggagaggatgactagaggggatgctgggatcgcgccgacgttggaggag
cgtatgaatccgaggcatgattatgtcaccactgatgtgacttatacgacgccgtccatc
aaccccgaccttcgtcaccaaatctccacaacgacttcaaacgtgacggcacctcgagaa
gcccataacgacaatctggagccagaaatcgtggtgatagacgacatggaaacatcatca
gaaaacggaatggacgaagaagaagaggtggaagaagaagaagtggaagatgctgatgat
tctggactggctgtaaatgcccccatagaagaaacagaagaagaacgagagagaaaagca
gagcgagacgcagagatgtcagtattggaaggtccatcagaagggaagattttgattcga
ttgaagtttctaagtgacacagaaaaggatacatacgcatctcttcaggatactgtagca
aaattcaaagtggaacatttcacagatctctctaataaggttatccgtttgatatttcaa
ggacaacttttaagagaagacagccggacactagaatcctatggtcttcaagcaggaagt
gtgatgcattgtcatataagtataatccctctttcacgacccggagtagccaacatgaca
ccgattgtacacgattcggagccccgtcggaggatcagaagatcccaaagaacgcttcga
gatccaactcccattcctccacaaggaatccagaatgcgttggatcgagcgattcaagag
caattggcaagaaatcgggctgcacaagacagaaatgttgggcaaatttatctacttttg
tccacaatggttccgattctctcggggatcggactcgcattttttcgtccagatcggatt
agagatcttcttcgacctgctacacttctaactatcagtcaatgggtatgcaatttgttg
gttgacaatgggctgttagagcaagaaaatgaagagcaggagcagcagagggaagaagtg
cagcaaacgcatttacagacgtccacgctgttttatatatttggaggccaaatgattgct
gtcagcatcttcttgtactacttcccggacgtcttcgatcgtgtcggattctcgattttt
gtcatcgtcttcctctatttcgtcttcgtcgtctattctcgccaacgaagacgtcgaccg
acacgttcgcaggctcagaatgagattatgattgaggatcagattgttcaggagactatt
agtcttctctaa
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