Caenorhabditis briggsae (nematode): CBG_12969
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Entry
CBG_12969 CDS
T01054
Name
(RefSeq) Protein CBG12969
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CBG_12969
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbr02000
]
CBG_12969
04147 Exosome [BR:
cbr04147
]
CBG_12969
04090 CD molecules [BR:
cbr04090
]
CBG_12969
Enzymes [BR:
cbr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
CBG_12969
Transporters [BR:
cbr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
CBG_12969
Exosome [BR:
cbr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CBG_12969
CD molecules [BR:
cbr04090
]
Proteins
CBG_12969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_29
AAA_16
RsgA_GTPase
AAA_24
DUF87
AAA_15
nSTAND1
nSTAND3
DUF815
AAA_21
SRP54
AAA_28
Rad17
CbiA
T2SSE
AAA_23
Motif
Other DBs
NCBI-GeneID:
8572046
NCBI-ProteinID:
XP_002630530
UniProt:
A8XGS7
LinkDB
All DBs
Position
II:complement(6494177..6499016)
Genome browser
AA seq
1231 aa
AA seq
DB search
MNRKREKESTISPSNSQSSSSSESSSSNSFSYCSLLRYSNKVDRLLLGLGIFLSISQGCC
SSLNAILFRDLTDVLISGQGSYTNQTFDHQQFNNETLNIIHTYFLYGTLLFSLSFVSMCC
WHTFCERQIFKIRVAYFSALLRQDWEWFDQNDSGAAIVRMNDGLERVRDGLGDKLGVIIA
YLTHFFCGLSLAFYLSVEMTIVTLIITPAFILPIIISRKMISKVTFKELEAYESAATAAG
EVISGIKTVVSFNGEQKEINRYSKFLSKAMYWGLWRASLSSFEGLLGHSSCVFQWQFHSG
WWGTRLVLKGSITPGTTLAVFWAVNGAIYFVGQAIPHLTSVSSCYSAAVPVFQIIDRTVI
LDGTSDKGLKLSKVKGKVKFENVWFKYPARQKVNVLKGISLHANPGENIALVGHSGSGKS
TTAALMMHFYELNGGKISIDDTNIDELNLSHLRNIVGIVSQEPLLFADTVENNMRLGAPD
LDDNEMEYYCKLANAHDFIEQLPNGYKTAIGNGGVELSGGQRQRIAIARTLARKPSILIL
DEATSALDSESESLVQIALENAAEGRTTITIAHRLGTIRNCNRIYVFDDGKIVEVGSHQE
LMEKDGHYAKMVQSQEIEVGNRQESTMEEYSFESRRESCDSKSSRQKFSKKTARSCSLTS
EKLLSDISPLPIGEENEQPSTFLEILRYTKPEWGLLAISILISVLRGFNYPIYSILYGRM
FRILSTGTDEEKSSNSGMNAIYLTALGIYALIVTMAAGCLIGYVGERLTKRLRILLFTNI
LRQDGEYFDVPEHAPGRLITRLSTDAPNIRAAIDQRLADVIQGFSAVFCGIAIAFWFSPT
MALMGLVNVGVLISLQGFITHVLKKRGEKDSERSEEPSRLAIEAVEQHRTVQYLTREQSF
VKKFADGMHPIHIRNLQRGILQSISYALSTSYTSFSFAIGYRFGLLLVDHDLANPFTVFQ
VIESLNSSSPSLLALGSYIPEFVRAQISAGLLFQMLRYEPKIDSNTGKKTTLDSDISLKN
VYFGYQVSGRKMILKDFTLKIESGKTTAIVGASGCGKSTTIQLLERFYDPIAGRIDFGST
NLRDLNLKHLRSQVALVEQEPTLFNYSIRKNIAYGLESIKEGEVIQAAKIAHAHEFITSL
PEGYDTIVGEGGSKLSGGQKQRIAIARAIVRNPKILLLDEAMSALDVESERLVQEALEKA
KEGRTCVVIAHRLTTIRGALLILIVFGSASF
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaaagcgagaaaaagagtcaactatttctccgtcgaattcacaatcatcgtcg
tcgagcgagtcttcttcttccaattccttcagctattgttccctgttgcgatactccaac
aaagttgataggttgcttcttggtctcggaatctttctttcgatttcccaaggctgttgt
agttctctgaatgcaattcttttcagagacctaacagatgttctaatcagtggacaagga
tcatataccaaccaaacatttgatcaccagcagttcaataatgaaacattgaatattatc
cacacttactttttgtacggtactcttctgtttagtttgtcattcgtttcgatgtgctgc
tggcatacattctgtgaacgacaaattttcaagattcgagttgcgtattttagtgcatta
ttacgtcaggattgggaatggttcgatcaaaatgattctggagcagctatagttcgaatg
aatgatggtttggaaagagttcgagatggattaggagacaagcttggtgttataattgcc
tatttgacccattttttctgtggattgtctcttgcattctacttaagtgttgaaatgaca
attgtgactctaatcatcactcctgcattcattcttccaatcatcatatctcgcaagatg
atctcaaaggtgacttttaaagaattggaagcctatgaatcggcggcaactgcagcagga
gaagttatcagtggcatcaaaacagttgtgtcttttaatggagaacaaaaagaaatcaac
aggtactcaaaatttttatcaaaagcaatgtactggggactttggagagcttctttgagc
tcatttgaggggcttttggggcattcttcatgtgtttttcaatggcaatttcattctggt
tggtggggaaccagattggttctaaaaggatcaataactcctggaaccacacttgctgta
ttttgggcagtcaatggagctatatactttgtcggacaagctattccacatttaacatcg
gtctcatcgtgctacagtgcagccgtacctgttttccagattattgatagaacagttatc
cttgatgggacatctgataaaggacttaaattatcgaaagtaaaaggaaaagttaagttt
gagaatgtttggttcaaatatcccgctcggcaaaaagtgaacgttctgaaaggaatcagt
cttcatgctaatcctggagaaaacattgcattggttggtcattctggaagtggaaaaagt
acaactgctgcccttatgatgcatttttatgagttgaatgggggaaaaatatcgattgat
gatacaaacattgatgaattgaatttgtcacatttgaggaacattgtaggaatcgtcagt
caggaaccattgttgtttgcggatactgttgagaacaatatgaggttgggagctccagat
ttagatgacaatgagatggaatactactgcaaactggctaatgcgcacgatttcatcgag
cagttgccgaatggatacaaaacagctattggaaatggaggagtcgaattatcaggagga
cagcgacagaggatagcgattgcgagaactttggcaagaaaaccatcgattttgattttg
gatgaagccacgagtgctttggattcagaaagtgaatctctggttcagatagcattggag
aatgcagcagaaggaagaactacgatcacgattgctcatagattgggtaccattcggaat
tgtaaccgaatttatgtttttgatgatggaaagatagtggaagttggaagtcatcaagaa
ctgatggagaaagatggacactatgcgaaaatggttcaatcccaagaaattgaagtggga
aataggcaagaatcgacaatggaagaatactctttcgaatctaggagggaatcttgtgac
tcgaaatcatctcgtcaaaaattcagcaaaaaaacggcgagatcatgttcgctgacatcc
gaaaaactgctttctgatatatctccattaccgataggagaagagaatgaacaaccgtcg
acctttcttgaaattctccgatacacaaaaccagagtggggccttcttgctatctccatc
cttatatcagttctccgcggattcaattacccaatttactcaatcctctatggaagaatg
ttccggattctatcaactggaacagacgaggagaagagtagtaattcaggcatgaatgca
atctatttaacggctcttggaatatatgcactgattgtgacaatggccgctggttgtttg
attggatatgtaggggaaagactcacaaagagacttcgaattctactgttcactaacatt
ctcagacaggatggtgaatactttgacgttccagaacatgcacctggacgactgatcact
cgtctttccacagatgctccaaatatccgtgcagctatagatcaacgtcttgctgatgtt
attcaaggattctcagcagttttttgtggaatagctattgctttctggtttagcccgacg
atggctctgatgggacttgtgaatgtaggagtgctcatttctctgcaaggctttataaca
catgtattgaaaaagagaggagaaaaagattcggaaaggtccgaagaaccatcaagacta
gccattgaagcggttgaacaacaccgaacagttcaatatttgactagagaacagagcttt
gtgaagaaattcgctgatggaatgcatccgattcacatcagaaacttgcaacgtggaata
ttacagtcaatatcgtacgcattgtctactagctacacatcgttcagttttgcaatcgga
taccgttttggtcttcttctagtcgaccatgacttagcgaatccattcacagtctttcaa
gtcatcgaatccttgaattcgtcatctccttctcttcttgcacttggatcatatattcca
gaatttgtgcgcgcacaaatttctgctggattactgtttcaaatgttaagatatgagcca
aaaatagattcaaatacaggaaagaaaactacgctggacagtgacatttccttgaaaaat
gtatactttggatatcaagtttctggacggaaaatgattctgaaagatttcacattaaag
attgaaagcggaaaaacaacagcaattgtgggggccagtggctgtggtaaaagtacaacc
attcaacttttggaaagattctacgatccaattgctggaagaatcgattttggaagtacg
aatttgagagatctgaatctgaaacatttgcggtctcaagttgcgttggttgaacaagaa
ccaactcttttcaattattccattcggaaaaatatcgcttatggcctagaatcgataaaa
gagggagaggtcatccaggctgcaaaaattgctcatgcccatgaatttatcacgagcttg
ccagaaggttacgatacaatagttggagaaggtggaagcaaactgtctggaggacagaaa
caacggatcgcaatagccagagcaattgtaagaaatcccaagattctccttttggatgaa
gcgatgagcgccttggatgtggaaagtgagaggctggttcaagaagctttggaaaaggca
aaagaaggaaggacttgtgttgtcatcgcccatcgtctcacaactatacgaggtgctctt
ttgattcttatcgttttcggctccgcgtcattttga
DBGET
integrated database retrieval system
