Caenorhabditis briggsae (nematode): CBG_13344
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Entry
CBG_13344 CDS
T01054
Name
(RefSeq) Protein CBG13344
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cbr01002
]
CBG_13344
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbr04121
]
CBG_13344
Enzymes [BR:
cbr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
CBG_13344
Peptidases and inhibitors [BR:
cbr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
CBG_13344
Ubiquitin system [BR:
cbr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
CBG_13344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
USP47_C
Motif
Other DBs
NCBI-GeneID:
8572864
NCBI-ProteinID:
XP_045095173
LinkDB
All DBs
Position
II:3256476..3261341
Genome browser
AA seq
1355 aa
AA seq
DB search
MVRVNDSNDTNTSSEHEDSSSNYVRLAGNGLPGGEQQASSSGVAAAPTNENSSPGRSNQL
ALPSSSTAATTSSSQYVIPLDENSHRYVGLVNQAMTCYLNSLVQSLYMTPEFRNAMYEWE
YVQLPAHIKEQRKKAEQSIPCQLQKLFLLLQTTENDSLETKDLTQSFGWTSNEAYDQHDV
QELCRLMFDALEHKWKGTKHEKLIQDLYRGTLEDFVACLNCGRESVKTDYFLDLSLAVKP
FGAIHAYKSIEEALNAFVQPELLNGSNQYMCENCKSNQDAHKGLRITQFPYLLTIQLKRF
DFDYNTMHRIKLNDKMTFPDVLDLNEYVSKEKRPAPTPSATTTTTTSPPKSAWKTIPAKD
EDDDMELGSPNAKRSTPGNQSPNRYSSRGDENGNFSYSTFKNLNFKISVIVGQPIDHESV
ESIMKTNGEDVYELFSVMVHSGNAAGGHYFAYIKNLDQDRWYVFNDTRVDFATPSEVEKS
FGGHPSGWNQSNTNAYMLMYRKIDRKRNASFILSNQLPQHIKDSREKWKRLEQEAEEERL
RKLSLIQVYVNINYPFPSYAHLPEKKQLDLTPQKYQIADDFCEYKIEISREQPIKSVFQC
AFDFFNERARAYNLPFSRNNSRLIYVEHGQLEMDFRSPKDMEKKLRSVFSSHHGEPISMY
GVHFILDVRIGSSFFNIDIQNRMTIKVQRVDIGKKTTANELTIVISGDEKMLKVKQWIGT
QFRDDIRDVLEARVVLEAASSRCEFMLIDSQHNSKEFRSLISQHMGHATPTLYYDGGMST
MITEESKEATIADRKLPFEKSQMYQILDRKCFSTFVKVRLPSQDEVEKAASTKNAFQGPS
WEETLAIMKAEDRLWNEPRAAAVEVMSTVSRAETTDAVTEVDDEPIPSGRGSTASMRSVS
MDDIEGDIGISGSLCNNTPQMSPCVSEGDDIDEKALDGKSQLMADYMQKTSPEFYYNRDP
QSPVNKNLKIALHEETPSEALSAVSSGQSTLVPSTSNQALSSMARSAIDEAFDAKITTVF
SHENYHKLDVDSRMRVVEFKKWVAEQLNMDKDQFVIVKHASDDGSDTGYETNFMDDETVS
GAFQSCFISIKLRAPLKQDEKMIQVILFDMLENQRDNWKPLFELPVSQSTVIGDILLQCI
RMYNEVYGEELTPKAVRLRDVSTTGHYNAKAILNPNDTLEKRGYNWCSHIYMQIVTDEAV
LGKPGDPILVRRFRPSTVEVSPTHEVLVDSNAENPVLSFMEALTKVSGIPLDRLAITEPK
EFNWQKWPFVKSRLDMLENKVAFAKDLHLNYPSPKDFVEKTGSRVLYYKDSEEEPRILTE
DERKQIKIKENGQSANANRRKERPLRIQMSSVCEG
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atggtacgggtgaacgactcaaacgacacaaataccagttccgaacacgaagactcttca
tcaaactacgtacggttggctggcaacggtctcccgggtggcgagcaacaggcaagctca
tccggtgtagccgctgcaccgacgaatgagaatagcagtccaggaagatcgaatcagctt
gctttgccctcctcgtcaacggcagcaaccacatcttcaagtcaatatgtgattcctctt
gatgagaacagtcacagatatgttggacttgtcaatcaggcgatgacgtgctatctcaac
agtctggtacagtctctctacatgacacccgaattccgcaatgcaatgtacgaatgggag
tacgtccaattgccggcacacatcaaggaacagaggaagaaagctgagcagagcattcct
tgccaacttcaaaagctcttcctcctacttcaaaccacggaaaacgactcgttggagaca
aaggatttgacacagagcttcggatggacatcaaatgaagcgtacgatcagcatgacgtt
caagaactgtgccgtctgatgtttgatgcgttggagcacaagtggaaaggaacgaagcat
gagaagctgattcaggacttgtacagaggtaccttggaagattttgtggcttgcttgaat
tgcggccgagaaagtgtcaagacggactactttctggatttgtcgcttgccgtgaagcca
tttggagccattcacgcctacaaaagcatcgaggaagcgctcaatgcgtttgtccaacca
gaacttctcaacggctccaatcagtacatgtgcgagaactgcaaaagcaatcaagacgct
cataaaggactccgcatcacacaattcccatatctcttgacaatccagctgaaacgcttc
gatttcgattacaacacaatgcatcgtatcaagctgaacgataagatgacgttcccagat
gtgctggatttgaatgaatatgtgagtaaggagaagcgtccggcgcctacaccttcagca
accaccaccaccacaacgtcaccaccgaaatcagcatggaaaacgattccagcgaaagac
gaggatgacgatatggagctgggatcaccgaatgcgaagagaagcacgccaggaaatcaa
tctccgaaccggtacagctctcgaggcgatgagaatggtaatttcagttattcaactttt
aaaaatttaaatttcaaaatttcagtgatcgttggccagccaatcgatcatgaatccgtg
gagagcattatgaagaccaatggtgaagacgtctacgagctattctccgtgatggtccac
tctggcaacgctgcaggtggccactacttcgcctacatcaagaacttggatcaggatcgg
tggtacgtgttcaacgacacgcgggtcgacttcgccactcccagcgaagtggagaagagt
tttggaggacaccccagcggatggaatcagtccaatacgaatgcatacatgctcatgtac
agaaagatcgacagaaaacggaatgccagcttcatcctcagcaaccaattgcctcaacac
atcaaggattctcgagagaaatggaagaggctggagcaagaggctgaggaggagcgtctt
cgcaagttgagtctgattcaagtctacgtcaatatcaactatccattcccgtcgtatgcg
catctcccggaaaagaagcaactcgatttaacgccacagaagtatcaaatcgccgatgac
ttctgcgagtacaaaattgaaatatcgagagagcagccgatcaaatccgtgttccaatgt
gcctttgattttttcaatgagcgtgctcgtgcctacaacttgcctttctccagaaacaat
tctcgtctgatctacgttgaacacggacagctggaaatggattttcggtctccaaaagac
atggaaaagaaactgaggtcggtgttcagttcgcatcacggtgaaccaatatccatgtac
ggtgtgcacttcatcctcgatgttcgtattggttcttcattctttaacatcgacatccag
aataggatgactataaaagtacaacgtgtggatatcggaaagaagacgactgctaatgag
ctgactatcgtgatatcaggagatgagaaaatgctgaaagtgaagcaatggattggtact
cagttcagagatgacattcgtgatgtattggaggcaagagtcgtactggaagccgcttca
tctagatgtgaattcatgctgattgatagtcagcataattctaaggaattccgaagtctt
atatcgcagcacatgggacatgcaacacctacactctactacgatggtggcatgagcaca
atgatcacagaagagtcgaaggaagcaacaattgctgatcggaaacttccattcgaaaag
tcccagatgtaccagatccttgatagaaaatgcttctcaacatttgtcaaagttcgcctg
ccatcacaagatgaagttgagaaggcggcatcaacgaagaacgcgttccaaggaccaagt
tgggaagagactttggccatcatgaaagcggaagatcgactgtggaatgagccacgagca
gcagcagtagaagtgatgtctacagtatccagagccgagacaactgatgcagtgactgaa
gtagatgatgagcctatcccatccggaagagggtctacagcatcaatgcgttctgtgagc
atggatgacattgaaggagacattggtatatccggaagtctgtgcaacaacacaccgcag
atgtccccatgtgtatctgagggagacgacattgatgagaaggcattggacggtaaatcc
cagcttatggctgattacatgcagaagacaagtcccgaattctactacaatcgagatcca
cagagccctgtgaacaaaaacttgaagattgctctccacgaggagaccccatcggaagca
ttgtcggctgtcagcagtggacaatcaacactcgttccttccacttcgaatcaagctctc
tccagtatggctcgtagtgcgatagatgaagcttttgatgccaagataacaacagtgttc
tctcatgagaactaccacaaactcgacgtggatagtagaatgagagtagtcgagttcaag
aaatgggtcgccgagcagttgaacatggacaaagatcagttcgtgattgtgaagcacgcg
tcggatgatggatcggatactggatatgagaccaacttcatggatgatgaaactgtttct
ggtgcgttccaatcatgcttcatatctatcaaactgcgagcaccattgaagcaggatgag
aagatgattcaagtcattctgtttgatatgcttgagaatcagagagacaattggaagcca
ctcttcgaactccctgtatcccagagcacggttattggtgacatccttttgcaatgcatt
cgaatgtacaatgaggtgtatggagaggagctcacaccgaaagcagtccggctacgtgac
gtctccactacagggcactacaatgcgaaggcgattctcaacccaaatgacactttggag
aaacgaggatacaactggtgctcgcacatctacatgcagatcgtcaccgatgaagcagtg
cttggtaagcctggagatccaattttggtgaggaggttccgcccgtcgaccgtagaagtc
agtccgacgcacgaggtgcttgtcgattcgaatgccgagaatcctgttttgtcgtttatg
gaagcgctgactaaagtgtctggaattccactggatcggctagcaatcacagagccgaaa
gagttcaattggcagaaatggccatttgtaaagagccgtttggatatgttggagaacaaa
gtggcattcgccaaggatctccatctcaactaccccagcccgaaggattttgtcgagaag
actgggagtcgagttctctactacaaggattcagaagaggagccgagaattctgacggag
gacgagcgcaagcagatcaagattaaagagaacgggcagtcggcgaatgcgaatcgtcga
aaggagaggccacttcgaattcagatgagcagtgtgtgtgaaggctaa
DBGET
integrated database retrieval system
