Caenorhabditis briggsae (nematode): CBG_13346
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Entry
CBG_13346 CDS
T01054
Symbol
Cbr-ubh-4
Name
(RefSeq) Protein CBR-UBH-4
KO
K05610
ubiquitin carboxyl-terminal hydrolase L5 [EC:
3.4.19.12
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CBG_13346 (Cbr-ubh-4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cbr01002
]
CBG_13346 (Cbr-ubh-4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbr04121
]
CBG_13346 (Cbr-ubh-4)
Enzymes [BR:
cbr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
CBG_13346 (Cbr-ubh-4)
Peptidases and inhibitors [BR:
cbr01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
CBG_13346 (Cbr-ubh-4)
Ubiquitin system [BR:
cbr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
CBG_13346 (Cbr-ubh-4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
Chromo_shadow
Motif
Other DBs
NCBI-GeneID:
8572866
NCBI-ProteinID:
XP_002629984
UniProt:
A8XHZ7
LinkDB
All DBs
Position
II:complement(3252207..3253285)
Genome browser
AA seq
326 aa
AA seq
DB search
MADAGNWCLIESDPGVFTEMLRGFAVDGLQVEELWSLDDDKALMKPVYGLIFLFKWRQGD
EGAGVPSTKENIFFAQQVIQNACATQALINLLMNVSDPAVKLGPILTQYKEFAIDMDPAT
RGLCLSNCEDIRTVHNSFSRQTLFELDVKGGDSEDNYHFVTYVPIGDKVFELDGLREAPL
EVSDLPDGKDWVEAVRPIIQERMAKYSQGEITFNLMALVPNRQQKYQEMLDALTQANENG
ELDEQITDITINIQEEERKMTTYRKENARRRHNYTPFVIQLLKILAKEGKLVGLINDAYQ
KAEARAKKPALNTDKTVLKLKDESMD
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgctggaaattggtgtctcatcgagagtgaccctggagttttcacagaaatg
ctccgcggtttcgcagttgatggattgcaagtcgaagagttgtggtcgctcgatgatgac
aaggccctaatgaaacccgtctacggtttgattttcctgttcaaatggcgtcaaggagac
gaaggagcaggagttccaagcaccaaagaaaacattttcttcgcacaacaagtcatccag
aatgcgtgtgctacacaggcgctgatcaatctcctgatgaacgtcagcgatccagccgtc
aagcttggaccaattctcacccagtacaaagaattcgcgattgatatggatccagctact
cgtggactttgtctatcaaactgcgaagatattcgtacagttcataatagcttttctcgt
caaacgctctttgagcttgatgtcaagggaggcgattccgaggacaactatcactttgtc
acatatgttccaattggtgacaaagttttcgagttggatgggctccgtgaagctcctctc
gaagtttccgatctcccagatggaaaggattgggttgaggctgttaggccaatcattcaa
gaacgaatggcaaagtacagccaaggcgagatcactttcaatttgatggcactcgttcca
aatcgccagcaaaaatatcaagagatgttggatgcgctgactcaagctaatgagaacggt
gaacttgatgagcaaatcactgatatcactatcaacattcaagaagaggagagaaagatg
acaacataccgaaaggaaaacgctcgacggcgccacaactacaccccgttcgtcattcag
cttctcaagattctcgccaaggagggaaagctcgtcggactcatcaacgacgcctaccag
aaagccgaggctcgcgcgaagaagccagctcttaacaccgataaaaccgtactcaaactg
aaggatgagtcgatggattga
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