Caenorhabditis briggsae (nematode): CBG_13514
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Entry
CBG_13514 CDS
T01054
Symbol
Cbr-pgp-1
Name
(RefSeq) Protein CBR-PGP-1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Pathway
cbr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CBG_13514 (Cbr-pgp-1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbr02000
]
CBG_13514 (Cbr-pgp-1)
04147 Exosome [BR:
cbr04147
]
CBG_13514 (Cbr-pgp-1)
04090 CD molecules [BR:
cbr04090
]
CBG_13514 (Cbr-pgp-1)
Enzymes [BR:
cbr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
CBG_13514 (Cbr-pgp-1)
Transporters [BR:
cbr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
CBG_13514 (Cbr-pgp-1)
Exosome [BR:
cbr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CBG_13514 (Cbr-pgp-1)
CD molecules [BR:
cbr04090
]
Proteins
CBG_13514 (Cbr-pgp-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
RsgA_GTPase
AAA_16
AAA
Zeta_toxin
AAA_29
Rad17
AAA_21
AAA_5
AAA_15
AAA_30
AAA_28
AAA_25
SbcC_Walker_B
AAA_33
YobI-ATPase
AAA_7
MMR_HSR1
nSTAND3
Motif
Other DBs
NCBI-GeneID:
8576972
NCBI-ProteinID:
XP_002634978
UniProt:
A8XI28
LinkDB
All DBs
Position
IV:17208778..17214240
Genome browser
AA seq
1319 aa
AA seq
DB search
MLRNGSLRRSLRTLDSFSLAPEDVIKTTLKTVEEYEGDNIDENGEIKNTRDAKDAVVNKV
TIPQLYRYTTMTEKIMLLVGTIVAIITGAGLPLMSILQGQVSQAFINEQIVINTGNHTIP
PNGRNYTDSDFNHDVMQVVWLYAGMTIGMWAAGQITVTCYLYVAEQMNNRLRREFVKAIL
RQDISWFDTNHSGTLATKLFDNLERVKEGTGDKIGMAFQYMSQFITGFIVAFTHSWKLTL
VMLAVTPIQALCGFLIAKSMSTFAIRETVRYAKAGKVVEETISSIRTVVSLNGLRHELER
YSTAVEEAKKSGVLKGLFLGISFGAMQATNFFSFALAFYIGVGWVHDGSLAPGDMLTTFS
SVMMGSMALGLAGPQLAVLGTAQGAASSIYEVLDRKPVIDSSSSAGRKDMKIKGDITVEN
VHFTYPSRQDVPILRGMNLRVNAGQTVALVGSSGCGKSTIISLLLRYYDVLKGNITIDGV
DVRDINLEFLRTNVAVVSQEPALFNCTIEENIRLGREDITREEMIAACKMANAEKFIKTL
PAGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKA
AKGRTTIIIAHRLSTIRNADLIISCKNGQVVEVGDHRTLMAQEGLYYDLVTAQTFTDAVD
ASAGGKFSRENSIARQTSEHEGIFRQASELDDVLNRVRSSTMGSITNGPVIEEKEQRIGK
DALTRLKEELEENNAQRTNLFEILYHAKPHALSVAIGITAAIVGGFIYPTYSVFFTSFIN
VFSGNPDDILSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTMDLRNKLFRNVLSQ
HIGFFDSPQNASGKICTRLATDVPNLRTAIDFRFSTVITTLVSMIAGIGLAFYYGWQMAL
LIVAILPIVGFGQYLRGRRFTGNNVKSASEFADSGKIAIEAIENVRTVQALAREDTFYYK
FCSKLDVPHKEAIKEAFIQGLSYGCACSVLYLLNTCAYRMGLALILHRTMTPMRVLRVMY
AITISTSTLGFATSYFPEYAKATFAGGIIFGMLKQKSEIDSLTLSGEKKKLSGKVIFKNV
RFAYPERPQIEILKGLSFSVDPGQTLALVGPSGCGKSTVVALLERFYDTLAGEVFIDGSE
IKTLNPENTRSQIAIVSQEPTLFDCSIAENIVYGLDPTTVTMSRVEEAAKLANIHNFISE
LPEGYETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEKIVQEALDR
AREGRTCIVIAHRLNTIMNADCIAVVNNGTIIEQGTHSVLMSQQGAYYKLTQKQMSEKK
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgaaacggcagtctccgtcggagtcttcggactctagactcttttagtttggct
cccgaagatgtgataaagactacattgaagactgtggaagaatatgaaggagacaatatc
gatgagaatggggagatcaaaaacactagggatgccaaggatgcagttgttaataaagtc
acaattcctcaattgtatcgatacacaacaatgacggaaaagataatgttgttagtggga
acaatagtggcaatcataactggagctggtcttccattgatgtcaatcctacagggacag
gtgtcacaggcattcattaatgagcaaattgtgattaacactggaaatcatacaattcct
ccaaacggacgcaactacacagactccgatttcaaccatgatgttatgcaagttgtttgg
ctttatgctggaatgaccattggaatgtgggcagctggtcagattactgtaacctgctat
ctttatgtagcagaacaaatgaacaaccgattgagaagagaattcgtaaaagccatcttg
aggcaagacatatcttggtttgatacaaatcactccggaaccttagctacaaaacttttt
gataacttggaaagagtgaaagaaggaaccggagacaaaatcgggatggccttccaatac
atgagtcagttcatcactggatttattgtggcgtttacgcacagttggaaattgacactt
gtcatgctagctgtaactcctattcaagcactttgcggattcctgattgccaagtctatg
tcaacatttgcgatacgagaaactgtacgatatgcaaaagcaggaaaagtagtagaagaa
acaatatctagtattcggactgttgtttcgttaaatggtctgagacacgaactcgagaga
tactcaacggccgtggaggaagccaaaaagtctggagtgttgaaaggactgttcttagga
atctcatttggagctatgcaagcaactaacttcttttcttttgcattggctttttatatc
ggtgtagggtgggtacatgatggatccctggcacctggagatatgctcacgacgttctct
tctgttatgatgggatccatggcccttggtcttgccggtcctcaactagctgttctcgga
accgcccaaggagcagcttccagtatttatgaagttttagatagaaagccagtgatcgac
tcatctagctctgctggccgtaaagatatgaaaatcaagggtgacataactgtggagaat
gttcacttcacctatccatcccgtcaagatgttcccattcttcgtggaatgaacctccgt
gtcaatgctggtcaaactgttgcccttgtcggatcctctggttgtggaaagtctacgatt
ataagtttgctgctccgttactatgatgtattgaaaggaaatattacaattgatggagtt
gatgttcgtgatataaacttggagtttttaagaacaaatgtggctgttgtctctcaggag
ccagcgcttttcaattgtactattgaggagaatattagacttggaagagaagacatcact
cgtgaggaaatgattgctgcttgcaagatggcaaacgctgagaagtttatcaaaacattg
ccagctggatataacacacttgttggagatcgtggtactcaattatctggaggacagaaa
caacgtattgccattgctcgtgctcttgttagaaacccaaagatccttcttctggatgaa
gccacgtcagcactggacgcagaatccgaaggaattgtgcagcaggcactggataaggct
gccaagggacgtaccacgattattattgcccatcgtttgtcaactatcagaaacgcagat
ttgattatttcttgtaaaaatggacaagtggtggaagtcggtgatcatagaactctgatg
gcgcaagagggtctctattatgatttggtgacagctcaaacattcacagatgctgttgat
gcttcagctggaggcaaattctctagagaaaacagtattgctcgtcaaacaagtgaacat
gaaggaatcttccgtcaagcgtcggaactggatgatgtgcttaatagagttagaagttcg
acaatgggatccatcactaatggaccagtgattgaagaaaaggagcagagaattggaaaa
gatgcattgacaagactcaaagaggaactagaagagaacaatgctcaacgaactaacctt
tttgagattctctaccatgccaagccccatgccctttctgtcgctatcggaatcactgct
gccatcgttggaggattcatctatcccacctattctgtattcttcacgtctttcatcaac
gtcttctctggaaacccagatgatattcttagtcaaggtcacttctgggctcttatgttc
cttgtgttggctgctgctcaaggaatctgttctttcctaatgacattctttatgggtatc
gcctcggagtctttgacaatggatcttcgtaacaagctcttccggaatgtgctttctcaa
catattggatttttcgactccccgcaaaatgcttctggaaagatttgcacaagattggca
acggatgttcccaatttgagaactgccatcgacttccgtttctctactgtcatcaccact
ttggtctccatgattgctggaatcggccttgctttctattatggttggcaaatggcattg
ctcattgttgccattcttccaatcgtcggatttggacagtatctccgtggtcgtcgtttt
actggaaataatgtgaagagtgcttcagaatttgctgattctggaaaaatcgcaatcgaa
gctattgagaatgtcagaaccgttcaagcgttggctagagaagacactttctattataaa
ttttgctccaaactggatgttccacataaggaagctatcaaggaagcttttatacaagga
ctatcttatggatgtgcctgctctgttctttacttgctcaacacttgcgcctacagaatg
ggtcttgctttgatccttcacagaaccatgactcctatgagagttcttcgtgtcatgtat
gccatcaccatctctacatctactctaggattcgctacttcctacttcccagaatacgca
aaagccacgtttgccggaggaatcatctttggaatgctgaaacaaaaatcagaaattgat
agcttgacattgagtggagaaaagaagaaattgtcaggaaaggtgatcttcaaaaatgtt
cgattcgcgtatccagaacgtccacaaatcgagattctaaagggattgagtttctccgtg
gatccaggacagacattggctttggttggtccatctggatgtggtaaatctacagtagtc
gctcttctcgagagattttatgatactttggctggagaggtcttcatcgatggatcagaa
atcaagacattaaatcctgagaatacgagatcccaaattgcgattgtgtcacaggagcca
acactttttgattgctcgattgcagagaatattgtttatggattggatccaactactgta
acaatgtcacgtgtcgaggaagctgccaaactggcaaacattcacaacttcatctcagaa
cttcccgaaggatacgagacccgtgtcggtgatcgtggtactcaattatctggaggacag
aaacaacgtattgccattgctcgtgctcttgttagaaatccaaagattcttcttctggat
gaagccacgtcagcactggatacagaatccgagaaaattgtacaagaggctctggatcgg
gcgagagaaggaagaacgtgcattgtgattgctcatcgtctgaacacaattatgaatgcg
gattgtattgctgtagtgaacaatggaacgattattgaacaaggaacccattctgtattg
atgtctcaacagggtgcttattacaagctgacacaaaagcagatgagcgaaaagaaatga
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