Caenorhabditis briggsae (nematode): CBG_20166
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Entry
CBG_20166 CDS
T01054
Symbol
Cbr-asd-1
Name
(RefSeq) Protein CBR-ASD-1
KO
K14946
RNA binding protein fox-1
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbr03041
]
CBG_20166 (Cbr-asd-1)
Spliceosome [BR:
cbr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
CBG_20166 (Cbr-asd-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
8584537
NCBI-ProteinID:
XP_002642543
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All DBs
Position
III:complement(11607785..11611331)
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AA seq
393 aa
AA seq
DB search
MVAAAAQATVLRPLQIEPTSSDVKPTTSEPSGGSTSAAVTSSSSKQPLQIGPIAPPSIGD
RSTSSETTEGNRRLHVSNIPFKYREPDLQTMFEKYGTVVDVEIIFNERGSKGFGFVTMQN
PEDADRARNEIHGSIIEGRRVEVNMATQRVHTKKAKPLMPAIAVDPISAAQNLLVAQQQQ
QNLQRALLQQQLAAQQLLVPRHPQQLIMPPTSAAAAINLQALQLQQLLLAQQQQQHQQLQ
QNPQLLLQLQQQQAAAMAQQQVPTSMAAAHHQMLQHQLGMDPLAQAQAQMAMYAMEQQRL
QLAQAVQGRALPASARGAPPASSASSHPPPPLPPTGSIGDPYLQQSLSNAAVSSLHAAAA
AAASQQHHHPHHQHLHQQASAAAAAALRRYAPY
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggttgccgccgccgcacaagccaccgtactccgcccacttcaaatcgagccaacgtcg
tctgatgtgaagccgacgacgtcggaaccttctggaggttccacgtcagcggcagtgacg
tcttcttcatcgaagcaaccacttcaaatcggaccgatcgcgccgccatcgatcggcgat
cgcagcacgagctccgaaaccacagaaggcaatcgtcgtctgcatgtgtcgaacatcccg
ttcaagtaccgggaaccggatcttcagacgatgttcgaaaagtacggtaccgtcgtcgat
gtggagatcatattcaatgagagaggatcaaagggctttggcttcgtgacgatgcagaat
ccagaggacgcggatcgcgcgcgcaacgaaattcacggatccatcattgagggacgacgc
gtcgaggtgaacatggccacacagagagtgcacacgaagaaggcgaagcccttgatgcca
gccatcgcagtggacccaatttcagctgcccaaaacctgctcgtcgcccagcaacaacaa
caaaacctccaacgagcacttctccaacaacaactcgccgctcaacagctcctcgtgcca
cgccatccacaacaactcatcatgccaccgacatccgcagcggccgccatcaatcttcaa
gctcttcagctacaacagcttcttctcgcccagcaacagcagcagcaccaacagcttcaa
cagaaccctcaattgttgctccagcttcaacaacagcaggccgctgcgatggctcagcag
caagtgccaacttcgatggcagcagcacatcatcagatgcttcaacatcaattgggcatg
gatccattggctcaggcgcaagcgcagatggccatgtacgccatggagcagcagaggttg
caattggcacaggctgtgcaaggtcgcgcccttcccgcatcagctcgcggagctccacca
gcgtcatcggccagctctcatccaccaccaccactgccaccgactggctccatcggagat
ccatacctccaacaatcgctatccaatgccgctgtctctagtctccatgccgccgccgca
gctgccgcatcccaacagcaccaccatccacaccatcaacacctccaccagcaagcgtcg
gctgccgccgccgccgcgcttcgtcgctatgctccgtactaa
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