Caenorhabditis briggsae (nematode): CBG_20899
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Entry
CBG_20899 CDS
T01054
Name
(RefSeq) Protein CBG20899
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
cbr
Caenorhabditis briggsae (nematode)
Brite
KEGG Orthology (KO) [BR:
cbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbr03009
]
CBG_20899
Enzymes [BR:
cbr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
CBG_20899
Ribosome biogenesis [BR:
cbr03009
]
Eukaryotic type
Other ribosome biogenesis factors
CBG_20899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltransf_12
Methyltransf_25
Methyltransf_23
NSUN5_fdxn-like
Methyltransf_31
Methyltransf_11
NSUN5_N
Ubie_methyltran
NodS
NNMT_PNMT_TEMT
TehB
Methyltransf_24
DUF938
MTS
Fibrillarin
Abhydrolase_8
FtsJ
Motif
Other DBs
NCBI-GeneID:
8573699
NCBI-ProteinID:
XP_045097165
LinkDB
All DBs
Position
II:11862650..11866867
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AA seq
784 aa
AA seq
DB search
MATDALYHEVAEIIRCVLAKEKSVRNAVYGSSYKVSFNNIFRILTQKSPIFVEVRPIMGC
AEENPEEKPKCNPFGTRFLTDDAKVFEHNAWDDVEWSEEQQEEAKRIVENQQSMKVDEEK
AMRLLSAPADQWDAFYAHNENRFFKDRNWLLKEFPELDVNEACNSEKETVKILEVGCGVG
NTTFPLMQVNNSSSRLFLHSCDYAPNAIRVLKSQEAYDPEKMNAFVWDITQPTPQEAPAP
ESLDYIVCIYVLSAIHPDKIRKALSNLMSLLKPGGTLLLKDYGRYDLTQLRFKKDRLIEG
NLYCRGDGTLVYFFEMEELEALLGEFGMKKKVMHVDRRLIVNRAKQVKMYRQWIQGKFLK
PNKKALLRLSCESLKFRPVFDEILKDKELRKMKNDPNINGSVDLLYVLMYETLVGSGLNR
CSQEMKSVISRRATRMKEVEKELGADGRGIKSIKEAEEGAKKIVIPRYARINTLKWTVEE
ALKTLETEEWKILGTASVEKFPELVANMKEDEIYKDPHVENLLIFAPNIQNFHEYWMVEQ
RYLILQDKASCLPAFLLNPRPGSQVFDTCAAPGMKTSHAAAIMDNQGKVWAMDRAADRVA
TMKQLLDGSKVAIASAFCGDFLKTDVTDKKFSKVSNPCFLSKILIFQVKFAIVDPPCSGS
GIVKRMDEITGGNAEKERLEKLKNLQAMILKHALKLPGLKRAVYSTCSIHEEENEQVVDE
VLLDTYVRQNFVLKKDVLPEWTHRGLSTYEVGEHCLRADPKVTLTNGFFVAVFERVKKDQ
EGEE
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggctactgatgcgctctaccacgaagtcgccgaaattattcgctgcgttttggccaag
gaaaaaagcgttagaaatgcagtctacggaagctcgtacaaagttagttttaacaacatt
tttcgaattttgacccaaaagtcaccgatatttgtggaagtcagaccaattatgggttgt
gctgaagagaatcctgaggaaaaaccgaagtgcaacccctttggaactcgattcctcact
gacgacgccaaagttttcgagcacaacgcctgggatgacgtggaatggtccgaggagcag
caggaagaagcgaaacggattgtagagaatcagcagtcgatgaaggttgacgaggagaag
gcaatgcgtcttttaagcgcccctgctgaccagtgggatgcgttctatgcgcataatgag
aatcgattcttcaaagatcggaattggttgctgaaggagtttccagagctcgatgttaat
gaagcttgtaattcagagaaagaaacagtgaagatcctggaagttgggtgtggagttgga
aatactacgtttcccctcatgcaagtcaacaattcatcttcccgattattcctacacagc
tgtgactatgctccaaatgcaatccgagttctgaaatctcaagaagcctacgacccggaa
aagatgaacgccttcgtttgggacatcactcaacccactccacaagaagcgcctgctcca
gaatccctagattacatcgtctgtatctacgttttgtctgcaatccatccagataaaatt
cgaaaagcactgagcaacctgatgtcacttttgaagccaggaggaactcttcttcttaag
gactacggtagatacgatttgacacaattgagattcaaaaaagatcgactaatcgagggg
aatttgtattgccggggagacggaacactggtgtatttctttgagatggaagagttggag
gcgttgttaggagagtttggaatgaaaaaaaaagtgatgcatgtggacagaaggctcatt
gtcaatcgtgcgaagcaagtcaaaatgtatcggcagtggattcaggggaaatttttgaag
ccaaacaaaaaagcgctgcttcgattgtcgtgcgaatcgctgaaattccgtccagttttc
gatgaaatcctcaaagataaagagctcagaaaaatgaaaaatgacccgaacatcaatgga
tccgtggatttgctctatgtactgatgtatgagacattggtcggatctggattgaatcga
tgctcacaagaaatgaaatctgtgatttcgagaagagcaacgaggatgaaagaggtggaa
aaagagctgggagcggatggaagaggaatcaaatcgattaaagaagcggaagaaggagca
aagaagattgtgattccgagatatgctagaattaatacgctgaaatggacagttgaagag
gctctgaagacgctggaaactgaggaatggaagattctagggacagccagtgttgagaaa
tttccggaattagtggcaaatatgaaagaggatgagatttacaaagatccacatgttgag
aacttgctcattttcgctccgaatattcagaatttccacgaatactggatggtggagcaa
agatatttgatccttcaagataaggcgtcttgtctgccagcctttcttctcaaccctcgt
ccaggatctcaagttttcgacacttgcgcggcgcctggaatgaaaactagtcatgctgca
gctattatggataatcaaggaaaagtctgggcgatggatcgtgctgcggatcgtgtggct
actatgaagcagctgttggatggatcaaaagtcgcaattgccagcgcgttctgtggagat
ttcttgaaaactgatgtgaccgataagaagttctcgaaggtttcaaacccctgttttctc
tcaaaaattctaatttttcaggtaaaatttgctatcgttgatccgccttgttctggatct
ggaattgtgaagcgcatggacgagattactggtgggaatgcggagaaggagcggctagag
aagctgaaaaatttgcaggcaatgatcctcaaacacgccctaaaactcccgggattgaaa
cgggcggtctactcaacttgctcaattcatgaagaggaaaacgagcaagtcgttgatgaa
gtgcttctggatacctatgttcgacagaatttcgttctgaagaaagacgtgcttcccgaa
tggacgcatcgtgggttgagcacttatgaagtcggagagcactgtcttcgagccgaccca
aaagtcacactcaccaatggattttttgtggctgtgtttgaaagggttaagaaggaccag
gaaggagaagaatga
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