Corvus brachyrhynchos (American crow): 103614689
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Entry
103614689 CDS
T08418
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103614689 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbrc03041
]
103614689 (DDX46)
Enzymes [BR:
cbrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103614689 (DDX46)
Spliceosome [BR:
cbrc03041
]
Complex A
U2 snRNP components
U2 related factors
103614689 (DDX46)
Complex B
103614689 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
103614689
NCBI-ProteinID:
XP_017588463
LinkDB
All DBs
Position
Unknown
AA seq
880 aa
AA seq
DB search
MRKRKERVEKWREEQRKKAMENIGELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEGNE
VEDEELDPLDAYMEEVKEEVKKFNMRSVKGGGGSEKKTGPTVTKVVTVVTTKKAAAESEK
KKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEV
PELAKMTQEEVNVYRLELEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQ
TQAIPAIMNGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRALEEGEGPIAVIMTPTRELAL
QITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTN
LRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPI
EVQVGGRSVVCSDVEQHVIVIEEENKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDL
MRASYPCLSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKQLMLVVNYSCPNH
YEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGNPIPTDLEKLWADFKDQ
QKAEGKLIKKSSGFSGKGFKFDETEQALANERKKLQKAALGLQDSDDEDTAVDIDEQIES
MFNSKKRVKDMAAPGTSNAPTPSAGNAEKLEIAKRLALRINAQKNLGAEAQVMVPFHFKD
VMQQATNAILRGGTIQAPTVSAKTIAEQLAEKINAKLNYVPIEKQEEEKQDGGQNESFKR
YEEELEINDFPQTARWKVTSKEALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIE
SANELAVQKAKAEITRLIKEELIRLQNSYQPTNKGRYKVL
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaacgaaaagaaagagtggagaaatggagggaagaacaacgcaagaaggcaatg
gaaaacataggagagctaaaaaaagaaattgaagagatgaaacaggggaaaaaatggagt
ttagaagatgatgatgatgatgaagaggaaactgcagaaggagaaaaagaaggcaatgag
gttgaagatgaggagttagatcctttagatgcttatatggaagaagtaaaagaagaggtc
aagaagttcaatatgagaagtgtgaaaggtggaggtgggagtgaaaagaaaactggacca
actgttaccaaggtggtaaccgtggtgacaaccaaaaaggcagctgctgagtcagaaaag
aagaaaggggagctcatggagaatgaccaagatgcaatggagtattcctcagaagaggag
gaagttgatcttcagactgccctgactggctatcagaccaagcagagaaagctgctagaa
ccagtggatcatggaaagatagaatatgaacctttcaggaaaaacttctatgttgaagta
ccagaactagctaaaatgactcaagaagaggtaaatgtatacaggctggagctggaagga
attacagtcaagggaaaaggctgtcccaaaccaataaaaacctgggtacaatgtggtatt
tccatgaagattctcactgctctcaaaaaacatgggtatgaaaagcccactcccattcaa
acccaggctattccagcaattatgaatggacgggatttgattggcattgctaaaacagga
agtggaaagactattgcatttcttttgcccatgttcagacacattatggatcagagagca
ttagaagaaggagaaggtcccatagccgtcattatgacacctacacgtgagttggctttg
cagattaccaaggagtgcaagaaattctcaaagacacttgggcttcgagttgtctgtgtt
tatggaggaacaggaatcagtgaacagatagctgaactcaaaagaggtgctgaaattatt
gtttgcacacctggacgtatgattgacatgttagcagctaacaatggtcgggtgacaaat
ctccgtagagtcacgtatgttgtacttgatgaagctgacagaatgtttgacatggggttt
gagcctcaggttatgcgcattgtagacaacgtcaggcctgaccgtcagactgtcatgttc
tctgctacttttcccagagctatggaggccctggctcgcaggatcctcagtaaacctata
gaagtgcaggttggaggcagaagtgttgtctgttctgatgtggagcaacatgtgattgtc
atagaggaggagaacaagtttctgaagttactggagctactgggacactatcaggagaaa
ggatctgttattatatttgtagataaacaagaacacgccgatgggttgttgaaagattta
atgagggcctcttatccttgcttgtctcttcatggaggtattgatcagtatgacagggac
agcattattaatgacttcaagaatggaacctgcaaacttctggtggccacgtctgtagca
gcgaggggcttggatgtgaagcagctgatgctggtggtcaattacagctgtcccaaccat
tatgaggactatgtgcaccgagcaggccgcactgggcgagctggcaataaagggtatgca
tatacattcattactgaggatcaggcacgttatgctggtgatatcattaaggctttggaa
ttgtctgggaatccaattcctactgatttggagaagctctgggctgacttcaaagaccaa
cagaaggctgagggaaagttgattaagaaaagcagtggattctctggcaaaggttttaag
tttgatgaaacagaacaggctttggctaatgaaagaaagaagctacaaaaagcagctctt
ggcttgcaagattcagatgatgaagatacagctgttgatattgatgaacaaattgaaagc
atgttcaattcaaagaaaagagtaaaagacatggcagcaccaggaacatcaaatgctcct
acaccatcagccgggaatgcagaaaaattggaaattgctaaaagattggctttgagaatc
aatgcccagaagaatcttggagcagaggcacaagtcatggtcccgttccactttaaggac
gtgatgcagcaggctacaaatgctatcctgagaggaggcacaattcaagctcctactgtg
tctgccaagaccattgcagagcaactggctgaaaaaatcaatgccaagctcaattatgta
cccatagagaagcaggaggaagagaaacaggatggaggacagaatgagtcatttaagaga
tatgaagaagaattagagatcaatgacttcccacagactgccagatggaaagttacctcc
aaagaagcactgcagagaatcagtgaatattctgaagctgccattacaatcaggggaact
tacttccctccaggcaaagaacccaaggaaggagaaagaaagatttatttggctatagaa
agtgccaatgaactggctgtacagaaagcaaaggcagaaatcacacgacttataaaagag
gagcttatcagattgcaaaattcttaccaaccaaccaacaaaggaagatacaaagtttta
tga
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