Corvus brachyrhynchos (American crow): 103616349
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Entry
103616349 CDS
T08418
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbrc03016
]
103616349
Enzymes [BR:
cbrc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
103616349
Transfer RNA biogenesis [BR:
cbrc03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
103616349
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
DUF3280
Adaptin_binding
Flavodoxin_NdrI
Motif
Other DBs
NCBI-GeneID:
103616349
NCBI-ProteinID:
XP_008632727
LinkDB
All DBs
Position
Unknown
AA seq
721 aa
AA seq
DB search
MDTWSYFHTCLVSIWLHRFYIYSAVAFGISLWIVVQFTTTRTKRKGEKSHGNPASSEGTA
DKLGNGCALPQPQEVHVAGVKIFYGSQTGTAKRFAKALAEAVTSLNLPVEVINMGDYDPE
DGLSEETSSRNICVFLVATYTEGQPPESAAWFCKWLEEAANDFRVGKSFLQGLRYAVFGL
GNSAYVDHYNTVGRRMDRWLWMLSASRIMTRAEGDCNVAQSKHGSIEADFEAWKAKFLTR
LQALCKGEKKPCSGKCKKGKCKSSGKQSKESSDHEHGTSEHENTEAEELFETSSEEEAGG
TDSVVDVEDLGNIMGHMKKAKRERELEEGAAGTGRKEEAERREMITPALREALTKQGYKL
IGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMEATPSLACANKCVFCWRHHTNPV
GTEWRWKMDQPEVILQEAIENHQNMIKQFKGVSGVKAARLEEALTVKHCALSLVGEPIMY
PQINRFVRLLHQHGISTFLVTNAQFPEEIRRLEPVTQLYVSVDASTKESLRRIDRPLFKD
FWQRFLDSLKALAEKQQRTVYRLTLVKAWNVDELKAYADLITLGKPDFIEVKGVTYCGES
SASSLTMANVPWHGEVVSFVQELARLLPDYGIACEHEHSNCVLMAHSKFQVDGEWRTWID
YGRFQELVREHEQSGGSRTFSAAEYTARTPPWALFGARERGFDPLDVRFQRKNKARDISG
C
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggatacatggagctacttccatacttgcctggtgtccatatggctgcacagattttac
atctattctgctgttgcttttgggatcagcctttggattgttgttcagttcaccaccacc
agaaccaaaaggaagggtgagaaatcccacgggaatcccgcttcctccgagggaacagca
gacaaactggggaatggatgtgcccttcctcagccacaggaggtccatgttgctggagtg
aagattttctatggctctcagactggcacagcaaagagatttgccaaagctctggctgaa
gctgttacttcccttaatttgcctgtggaagtcattaacatgggagactacgatccagaa
gatggtttatcagaggagacaagcagcaggaacatctgtgttttcctggtggccacctac
accgaggggcagcccccagagagcgcagcctggttctgcaagtggctggaagaggcagcc
aatgatttccgtgttgggaagagcttcctgcagggcctgagatacgccgtgtttgggctg
ggaaactcggcctacgtggatcactacaacacggttggaaggaggatggacaggtggctg
tggatgctcagtgccagcaggatcatgactcgagccgaaggggactgcaatgtggcccag
agcaagcacggcagcatcgaggctgactttgaggcctggaaagccaaattcctcactcgg
ctccaggcgctctgcaaaggggagaaaaagccctgcagtgggaagtgcaagaaggggaag
tgcaaatcttcagggaagcagagcaaggaaagctcggatcatgaacatgggacttcggaa
catgagaatactgaggcagaggaattgtttgaaaccagtagtgaggaggaagctggaggc
acagattctgtcgtcgatgttgaagatcttggcaatatcatgggtcacatgaagaaagca
aagagagagcgggagctggaggaaggagctgctggaacggggaggaaggaggaggctgag
aggagagagatgatcaccccggccctgagggaggcactcacaaagcaaggttataaactc
attgggagccattctggggtgaagctctgccgatggacaaagtcgatgctgcggggccgc
gggggctgctacaagcacaccttctatggcatcgagagccaccgctgcatggaggccacc
cccagcctggcctgtgccaacaagtgtgtcttctgctggaggcaccacacaaaccccgtg
ggcaccgagtggcgctggaagatggaccagcctgaggtgatcctgcaggaggccattgag
aaccaccagaacatgatcaagcagttcaaaggcgtgtcaggagtgaaggcagctcgcctg
gaggaggccctgacggtgaagcactgtgccctgtccctggtgggggagcccatcatgtac
ccacagatcaaccgcttcgtgaggctgctgcaccagcacggcatctccaccttcctggtc
accaacgctcagttccccgaggagatcaggaggctggagcctgtcacccagctctatgtc
agcgtggatgccagcaccaaggagagcctgaggaggattgacagacccctcttcaaggac
ttctggcagaggtttctggacagcttaaaggccttggctgaaaagcaacaacgcaccgtt
tacaggctgaccctggtgaaagcttggaatgtggatgaactcaaagcttatgctgacctg
ataaccctcgggaaaccagacttcattgaggtcaagggcgtgacctactgcggggagagc
tctgccagcagcctcaccatggccaacgtgccgtggcacggggaggtcgtgagcttcgtg
caggagctggcgcggctgctcccggactacggcatcgcctgcgagcacgagcactccaac
tgcgtcctgatggcccacagcaagttccaggtggatggcgagtggaggacctggattgac
tacggccgtttccaggagctggtcagggagcacgagcagagcggcggctccaggaccttc
tcagcggccgagtacacggccaggactcctccctgggccctctttggggccagggaacgg
ggattcgaccccctggatgtgagattccagcggaagaacaaggcacgggacatctcgggg
tgctga
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