Corvus brachyrhynchos (American crow): 103617974
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Entry
103617974 CDS
T08418
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103617974 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbrc03021
]
103617974 (SMARCC1)
03036 Chromosome and associated proteins [BR:
cbrc03036
]
103617974 (SMARCC1)
Transcription machinery [BR:
cbrc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103617974 (SMARCC1)
Chromosome and associated proteins [BR:
cbrc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103617974 (SMARCC1)
PBAF complex
103617974 (SMARCC1)
GBAF(ncBAF) complex
103617974 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
SWIRM-assoc_2
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
BRCT_2
DUF919
BRCT
SpeFL
Motif
Other DBs
NCBI-GeneID:
103617974
NCBI-ProteinID:
XP_017593162
LinkDB
All DBs
Position
Unknown
AA seq
983 aa
AA seq
DB search
MDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLSRPT
IYLIPDMELKLANKLKDIVKRHQGTVTEEKSKATHHVYPSPTSMDDDEWLRPVMKKDKQV
LVHWGFFPDSYDTWVHANEIDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDE
NRKSVSFRQRISMKNEEPVRSPERRDRKAAASTRKRKHSPSPPPTPVESRKKTGKKGQAA
LYGKRRGQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDE
QDEETVATGGKEDEDPNKGDQSRSIDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRA
LPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLE
QWGLINYQVDPESRPMAMGPPPTPHFNVLADTPSGLMPLHIRTPQVPAAQQMLSFPEKNK
EKPTDLQNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVG
SRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRV
ASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAAPASGKVDPTYGLESSCIAGTGPDEP
EKMDGAEEEKMETEAEGQQAEKVENKAESETEEGEKVPEGENERSAEKEPESEGAAEPKT
EEKEAEENKENVDGSKDKEAEAGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEER
KIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYA
ELRARQQMEQQHSQNPQQPHQHPSGPGMNPLGAPAHPGLLPHQQPPPDPATSSPSSAGQM
PGPGSMIPGQPLPGRMMPSVSASIHPGGGAAPPGMAPMSGNLIGPRVPLAAPNGMYPGPA
QPPPPAEGVTPPPAGAPPASAAP
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaaagctggaggtacattatgtcacattcttggtgctgcttacaaatataag
aatgaacagggctggaggaggtttgacctgcagaatccctcccggatggatcggaacgtg
gagatgttcatgaacattgagaaaacactggtgcagaacaactgtctgagcagaccaacc
atctacctcattcctgacatggagctgaagctggccaacaagctgaaggacattgtcaaa
cgtcaccagggaacagtcactgaagagaaatccaaggctacccaccatgtgtatcccagt
cctacctcaatggatgatgatgagtggttgagacctgtgatgaaaaaggacaagcaggtg
ctggtacattggggcttttttccagacagctacgacacctgggtccatgccaacgaaata
gatgccgaaatcgaggatcccccgattcccgagaagccgtggaaggttcacgccaagtgg
atcttggacacagatgtgttcaatgagtggatgaatgaggaggattatgaggtggatgag
aacaggaaatccgtgagttttcgccagaggatctccatgaagaatgaagagcctgtgcgg
agcccggagaggagggataggaaagcagcagccagcactaggaagaggaaacattctcct
tctccaccccccactcctgtggagtccaggaaaaagacagggaagaaaggacaagctgct
ctgtatgggaagaggagggggcagaaggaagaggatgaacaggaggatctcaccaaggac
atggaggatcccaccccagtacccaacatagaggaagtggtacttcccaaaaatgtgaac
ccaaagaaggacagtgagaacacgcccgtgaaaggaggaactgtggcagacctggatgag
caggatgaggagacagtggcaactggaggaaaggaggacgaggaccccaacaagggtgac
cagagccgctccatcgacccgggggaggacaacgtcaccgagcagaccaaccacatcatc
atccccagctacgcctcctggttcgactacaactgtatccacgtgattgaacgtcgtgcg
cttccggaattcttcaacgggaaaaacaagtccaagactccagaaatatacctggcctac
aggaacttcatgatcgacacgtatcggctgaacccgcaggagtacctgaccagcactgcc
tgcaggaggaacctcaccggggacgtctgcgccgtcatgagggtccacgccttcctggag
cagtgggggctcatcaactaccaggtggatcctgagagccgccccatggccatggggcct
ccccccacccctcacttcaacgtgctggccgacaccccctcggggctgatgcccctgcac
atccgcaccccgcaggttccagctgcccagcagatgctgagctttcctgagaaaaacaag
gagaagccaactgacctgcagaacttcggccttcgcacagacatctactccaaaaagact
ttggccaagagtaaaggtgcaagtgctggcagagaatggacagagcaggagacactgctg
ctgttagaggccctggagatgtacaaggacgactggaacaaggtgtcggagcacgtgggc
agccgcacgcaggacgagtgcatcctgcacttcctgcggctgcccatcgaggatccctac
ctggagaactcggacgcctcgctgggccccctggcctaccagcccgtgcccttcagccag
tcgggcaaccccgtcatgagcaccgtggccttcctggcctccgtggtggatccgcgcgtg
gcctcggccgccgccaaggccgccctcgaggagttttcccgggtcagagaggaggtgccc
ctggagctggtggaagcccacgtgaagaaagtgcaggaagcagcaccagcctctgggaag
gtggatcccacctacggcctggagagcagctgcatcgccggcaccggccccgacgagccc
gagaagatggatggagctgaggaagagaagatggaaacggaggcagaggggcagcaggca
gagaaggtggagaacaaagccgagagtgaaactgaggaaggggagaaagtcccggaaggg
gaaaacgagcggagtgcagagaaggagccggagagcgaaggggctgcggagcccaagaca
gaggaaaaggaggcagaggagaacaaggagaacgttgatggcagcaaagacaaagaggcc
gaggctgggaagaagaaagtggaacacgagatctcggaaggaaatgtggccacagctgca
gctgctgccctggcctctgctgccaccaaggccaagcacctggcggccgtggaggagagg
aagatcaagtccctggtggcccttttggtggaaactcagatgaagaagctggagataaaa
cttcgccactttgaggagctggaaaccatcatggaccgggagaaagaggcactggagcag
cagaggcagcagctgctgaccgagaggcagaacttccacatggagcagctcaagtacgcc
gagctaagggctcgccagcaaatggagcagcagcacagccagaacccccagcagccccac
cagcaccccagcgggcctggcatgaaccccctgggggcaccagcacacccagggctgctg
ccccaccagcagcccccgcccgaccctgccacctcctctccctcctctgcaggtcagatg
ccggggcctggctccatgatcccaggacagcccctgccgggccggatgatgccaagcgtg
tccgccagcatccaccccggtggcggggccgccccgcccgggatggccccgatgtcgggg
aacctcatcggcccccgcgtcccgctggcagctcccaacggcatgtatcccggcccagcg
cagccgccgccgcctgcggaaggagtgaccccgccaccggccggagccccgccggcctca
gccgctccctaa
DBGET
integrated database retrieval system