KEGG   Corvus brachyrhynchos (American crow): 103617974
Entry
103617974         CDS       T08418                                 
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cbrc  Corvus brachyrhynchos (American crow)
Pathway
cbrc03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:cbrc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    103617974 (SMARCC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbrc03021]
    103617974 (SMARCC1)
   03036 Chromosome and associated proteins [BR:cbrc03036]
    103617974 (SMARCC1)
Transcription machinery [BR:cbrc03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     103617974 (SMARCC1)
Chromosome and associated proteins [BR:cbrc03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    103617974 (SMARCC1)
   PBAF complex
    103617974 (SMARCC1)
   GBAF(ncBAF) complex
    103617974 (SMARCC1)
SSDB
Motif
Pfam: SWIRM-assoc_3 SWIRM-assoc_1 SWIRM SWIRM-assoc_2 Myb_DNA-binding Myb_DNA-bind_6 Chromo BRCT_2 DUF919 BRCT SpeFL
Other DBs
NCBI-GeneID: 103617974
NCBI-ProteinID: XP_017593162
LinkDB
Position
Unknown
AA seq 983 aa
MDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLSRPT
IYLIPDMELKLANKLKDIVKRHQGTVTEEKSKATHHVYPSPTSMDDDEWLRPVMKKDKQV
LVHWGFFPDSYDTWVHANEIDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDE
NRKSVSFRQRISMKNEEPVRSPERRDRKAAASTRKRKHSPSPPPTPVESRKKTGKKGQAA
LYGKRRGQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDE
QDEETVATGGKEDEDPNKGDQSRSIDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRA
LPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLE
QWGLINYQVDPESRPMAMGPPPTPHFNVLADTPSGLMPLHIRTPQVPAAQQMLSFPEKNK
EKPTDLQNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVG
SRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRV
ASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAAPASGKVDPTYGLESSCIAGTGPDEP
EKMDGAEEEKMETEAEGQQAEKVENKAESETEEGEKVPEGENERSAEKEPESEGAAEPKT
EEKEAEENKENVDGSKDKEAEAGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEER
KIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYA
ELRARQQMEQQHSQNPQQPHQHPSGPGMNPLGAPAHPGLLPHQQPPPDPATSSPSSAGQM
PGPGSMIPGQPLPGRMMPSVSASIHPGGGAAPPGMAPMSGNLIGPRVPLAAPNGMYPGPA
QPPPPAEGVTPPPAGAPPASAAP
NT seq 2952 nt   +upstreamnt  +downstreamnt
atggatttcaaagctggaggtacattatgtcacattcttggtgctgcttacaaatataag
aatgaacagggctggaggaggtttgacctgcagaatccctcccggatggatcggaacgtg
gagatgttcatgaacattgagaaaacactggtgcagaacaactgtctgagcagaccaacc
atctacctcattcctgacatggagctgaagctggccaacaagctgaaggacattgtcaaa
cgtcaccagggaacagtcactgaagagaaatccaaggctacccaccatgtgtatcccagt
cctacctcaatggatgatgatgagtggttgagacctgtgatgaaaaaggacaagcaggtg
ctggtacattggggcttttttccagacagctacgacacctgggtccatgccaacgaaata
gatgccgaaatcgaggatcccccgattcccgagaagccgtggaaggttcacgccaagtgg
atcttggacacagatgtgttcaatgagtggatgaatgaggaggattatgaggtggatgag
aacaggaaatccgtgagttttcgccagaggatctccatgaagaatgaagagcctgtgcgg
agcccggagaggagggataggaaagcagcagccagcactaggaagaggaaacattctcct
tctccaccccccactcctgtggagtccaggaaaaagacagggaagaaaggacaagctgct
ctgtatgggaagaggagggggcagaaggaagaggatgaacaggaggatctcaccaaggac
atggaggatcccaccccagtacccaacatagaggaagtggtacttcccaaaaatgtgaac
ccaaagaaggacagtgagaacacgcccgtgaaaggaggaactgtggcagacctggatgag
caggatgaggagacagtggcaactggaggaaaggaggacgaggaccccaacaagggtgac
cagagccgctccatcgacccgggggaggacaacgtcaccgagcagaccaaccacatcatc
atccccagctacgcctcctggttcgactacaactgtatccacgtgattgaacgtcgtgcg
cttccggaattcttcaacgggaaaaacaagtccaagactccagaaatatacctggcctac
aggaacttcatgatcgacacgtatcggctgaacccgcaggagtacctgaccagcactgcc
tgcaggaggaacctcaccggggacgtctgcgccgtcatgagggtccacgccttcctggag
cagtgggggctcatcaactaccaggtggatcctgagagccgccccatggccatggggcct
ccccccacccctcacttcaacgtgctggccgacaccccctcggggctgatgcccctgcac
atccgcaccccgcaggttccagctgcccagcagatgctgagctttcctgagaaaaacaag
gagaagccaactgacctgcagaacttcggccttcgcacagacatctactccaaaaagact
ttggccaagagtaaaggtgcaagtgctggcagagaatggacagagcaggagacactgctg
ctgttagaggccctggagatgtacaaggacgactggaacaaggtgtcggagcacgtgggc
agccgcacgcaggacgagtgcatcctgcacttcctgcggctgcccatcgaggatccctac
ctggagaactcggacgcctcgctgggccccctggcctaccagcccgtgcccttcagccag
tcgggcaaccccgtcatgagcaccgtggccttcctggcctccgtggtggatccgcgcgtg
gcctcggccgccgccaaggccgccctcgaggagttttcccgggtcagagaggaggtgccc
ctggagctggtggaagcccacgtgaagaaagtgcaggaagcagcaccagcctctgggaag
gtggatcccacctacggcctggagagcagctgcatcgccggcaccggccccgacgagccc
gagaagatggatggagctgaggaagagaagatggaaacggaggcagaggggcagcaggca
gagaaggtggagaacaaagccgagagtgaaactgaggaaggggagaaagtcccggaaggg
gaaaacgagcggagtgcagagaaggagccggagagcgaaggggctgcggagcccaagaca
gaggaaaaggaggcagaggagaacaaggagaacgttgatggcagcaaagacaaagaggcc
gaggctgggaagaagaaagtggaacacgagatctcggaaggaaatgtggccacagctgca
gctgctgccctggcctctgctgccaccaaggccaagcacctggcggccgtggaggagagg
aagatcaagtccctggtggcccttttggtggaaactcagatgaagaagctggagataaaa
cttcgccactttgaggagctggaaaccatcatggaccgggagaaagaggcactggagcag
cagaggcagcagctgctgaccgagaggcagaacttccacatggagcagctcaagtacgcc
gagctaagggctcgccagcaaatggagcagcagcacagccagaacccccagcagccccac
cagcaccccagcgggcctggcatgaaccccctgggggcaccagcacacccagggctgctg
ccccaccagcagcccccgcccgaccctgccacctcctctccctcctctgcaggtcagatg
ccggggcctggctccatgatcccaggacagcccctgccgggccggatgatgccaagcgtg
tccgccagcatccaccccggtggcggggccgccccgcccgggatggccccgatgtcgggg
aacctcatcggcccccgcgtcccgctggcagctcccaacggcatgtatcccggcccagcg
cagccgccgccgcctgcggaaggagtgaccccgccaccggccggagccccgccggcctca
gccgctccctaa

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