Corvus brachyrhynchos (American crow): 103618449
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Entry
103618449 CDS
T08418
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
cbrc
Corvus brachyrhynchos (American crow)
Pathway
cbrc03013
Nucleocytoplasmic transport
cbrc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103618449 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
103618449 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbrc03019
]
103618449 (THOC1)
03041 Spliceosome [BR:
cbrc03041
]
103618449 (THOC1)
Messenger RNA biogenesis [BR:
cbrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
103618449 (THOC1)
Spliceosome [BR:
cbrc03041
]
Complex C
Other components
EJC/TREX
103618449 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
103618449 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
Motif
Other DBs
NCBI-GeneID:
103618449
NCBI-ProteinID:
XP_017593807
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQFNLENVTVFNTNEHESTL
GQKHTEEREEGMDVEEGEMGDDEAPTSCSIPIDYNLYRKFWSLQDYFRNPVQCYEKVSWK
TFLKYSEEVLAVFKSYKLDDTQASRKKLEELKTGGEHVYFAKFLTSEKLMDLQLSDSNFR
RHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKAVYQLLSENPPDGERFSKMV
EHILNTEENWNSWKNEGCPSFVKERSHPEFQLGPPDSKPMRPVRKRPAPEDFLGKGSNKK
ILMGNEELTRLWNLCPDNMEACKSESREYMPTLEEFFEEAIEQADPENMVENKYKAVNNS
NYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEIKTGEDEDEED
NDALLKENNESPEVQRDKAMTGEQIESFANRLGEQWKALAPYLEMKESDIRQIELDSEDV
KMRAKQLLVAWQDQEGAHATPENLITALSKAGLGDLAESLTNDTEGSS
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaatgacctcttaagaagattatctaagtcacaaaacacagtcttttgtggaaga
attcagctcttcttggctcggttatttccactttcagaaaagtcagggcttaacctacag
agtcagtttaacctggaaaatgtcactgtgttcaataccaatgaacatgagagcactctg
ggacagaagcacaccgaggagagggaagaaggaatggatgtagaagaaggtgaaatggga
gatgatgaagcaccaacaagttgttccattccaatagattataacctgtatagaaaattc
tggtcacttcaagattattttagaaatcctgtgcagtgctacgagaaggtgtcatggaaa
actttccttaagtactcagaagaggttttggctgttttcaaaagttataaactggatgac
actcaggcttcccgaaaaaagttggaagaactaaaaacaggaggagaacatgtatatttt
gcaaagttcctaactagtgaaaagctgatggatttacagctgagtgacagtaacttccgc
cgtcacatcttgttgcagtacctaatactgtttcagtatctaaagggacaagtcaaattt
aaaagttcaaactatgttctaacagatgaacagtctctttggattgaagatactacaaaa
gcagtttatcagcttctttcagaaaatcctccagatggggaaaggttctcaaaaatggta
gagcatatattaaatactgaagaaaactggaactcgtggaaaaatgagggctgccccagc
tttgtgaaagaaagatctcatccagagtttcagcttggacctcctgattctaagccaatg
aggcctgtgagaaagaggccagctccagaggacttcttaggaaaaggatccaacaaaaaa
atcctaatggggaatgaggaactgacccgcctttggaatttatgtcctgataacatggaa
gcctgtaaatctgagagtagggaatatatgccaacactggaggaattttttgaagaagct
attgaacaagcagaccctgaaaacatggtggaaaataagtataaggctgtgaacaattct
aactatggctggagagcactgagacttctggcacgcagaagtccccacttcttccagcca
acaaaccaacaattcaagagtttacctgaatatctagaaaacatggtaatcaaattagcc
aaggagctgcctcctccttctgaagaaataaaaacaggtgaagatgaagatgaggaagat
aatgatgctttattaaaggaaaacaatgaaagtccagaggtgcaacgggacaaagccatg
acgggcgagcagatcgagtcctttgcgaacaggctgggggagcagtggaaggccttggcc
ccctacttggagatgaaggaatctgatatacggcagattgagctggacagcgaggatgtg
aagatgagagcgaagcagctgctggtggcctggcaggatcaggagggtgctcacgccacc
cctgagaacctgatcacggcactgagcaaagccgggcttggggacctggccgaaagcctc
accaacgacaccgagggcagcagctaa
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