Corvus brachyrhynchos (American crow): 103623986
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Entry
103623986 CDS
T08418
Name
(RefSeq) sodium channel protein type 5 subunit alpha-like
KO
K04842
voltage-gated sodium channel type X alpha
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cbrc04040
]
103623986
Ion channels [BR:
cbrc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
103623986
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
103623986
NCBI-ProteinID:
XP_017602207
LinkDB
All DBs
Position
Unknown
AA seq
1945 aa
AA seq
DB search
MAEFLLPGTNNFRRFTQESLAEIKKRIATKKNCRRNTIEQKTEEKARPQLDLKAFQKLPA
LYGNLPSELIGEPLEDLDPYYKDHKVFIVLNKQKTIYRFTATRALWIFSPFHPIRRRAIK
ILVLTLFTWFIMCTILTNCVFMALTESSSSSWNTYVEFTFTGIYTFESLIKILARGFCLN
EFTFLRDPWNWLDFTVIVMAYVGAFSRLGSVSVLRTFRVLRALKTISVVPGLKIIVGALI
QSVKKLADVMILTVFCLSVFALIGLQLFKGNLRQKCIRNTTEFCNKTWESYEEFANDSVN
YFARKNGTVDILLCGHGAGVCPPGYKCCKIGPNPDYGFTSFDTFGWAFLSLFRLMTQDYW
ERLYQQTLRASGKVYIVFFMMVIFLGSFYLVNLILAVVTMAYEDQNKATIAETEAKERKF
REAMELLQKGQESLGIKGIDILSLSSFEASSLSTKEVKERNNRKKRNKSLGIEDNEEEEV
FPKSQHPDSQRKLSLLGLVYGPNATQAKRRLSHGSVFNFQMPTVDVGSRADFSDEETHGA
GGHKTRCQSLSGTQMGRRSSLQSQRGHSSHPATPNCVRSSKGANVDDHLGVGLGVGGGSS
RVHSQDPVSSEGVMLPPVMEDSGKRDLPAVHNESSMMHLPPHLSAEYFNEALQRQRAASV
VSIITSVLEEHEEAQRKCPPRLKNFALKYLIWDCCPLWLRIKEKVAAFIKDPFFDLTITL
CIVMNTLFMALEHNNMSPTFKFMLKIGNLVFTGIFTAEMILKIIALDPYYYFQQPWNIFD
SVIVTLSLIELSFPKHKSKKERRKGGTLSVLRSFRLLRVFKLAKSWPTLNTLIKIICNSL
GALSNLTLVLAIIIFIFAIVGMQLFGKNYVLNCSKINKDCKPRWHMKDFFHSFLVIFRIL
CGEWIETMWDCMVVAEPSLCLVVFLLVMVIGNLVVLNLFIALLLSSFSTDSLQTTEDDGE
MNNLRIAFARIRKGFHFVKSVTWDACCRKLRQIKKIHRKKIRLTAQNSLPCTETKSCKEN
YNNEWIEKNKDKCPGLEDFVSNPNIFVCVPIAEAENTSEGFEDDDKLSSFTDTEHSKQLD
SVSSSEVSTVDLTNPEDVLKQIPEFSEDFKTPEQCFPEGCVRYFHCCLGSAVKFGGETWW
NLRKTCYQIVEHSWFESFIVFMILLSSGALAFEDIHIHKRERIQAILGFLDKMFTFIFVL
EMLLKWVAYGFKKYFTNAWCWLDFLIVNVSLVNLFGSTFGPMKSLRTLRALRPLRALSRF
EGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGKCVNMTDENSELNSSI
DNKTDCGMYNNTGKIFWVNVKVNFDNVGSGYLALLQVATFKGWTDIMYAAVDSREKDDQP
KMENSLYMYLYFVNFIIFGSFFTLNLFVGVIIDNFNQQKKKISGEDIFMTEEQKKYYNAM
KKLGSKKPQKPIPRPLNRYQGFLFDIATSQIFDVVIMGLICLNMITMMVETYEQSETKTN
VLSKINILFVTIFTAECVLKLLALRQYYFSNAWNIFDLVVVIISLVALLLSSIGKAFEHL
LPPTLFRVIRLVRIGRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGM
ANFAYVKMEGGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPYCDPNVKGTI
GECGKPAIGIIYFVSYIIISFLIVVNMYIAVILENFNVATEESTEPLGEDDFDIFYEIWE
KFDPEATQFITVSVLSDFADALSKPLRVPKPNKVELTAMDLPVVSGDKIHCLDILFAFTK
RVLGDSGELDSLKVQMEEKFMAANPSKQSYEPISTTLRHRQEEASATVIQRAYRCHLLLR
SLKQASYLYQRRTCSTDTLGDAAPENEGLIASMLRANYGRSANKSETSSSVSIPPSYDSV
TRESSGNLMVENGEITGNQQSPGVK
NT seq
5838 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcttgctacctggaaccaacaacttccgtaggttcactcaggaatccttg
gcagagatcaaaaagagaattgccaccaaaaagaattgtcgaagaaataccatagagcag
aaaactgaggagaaagcacgtcctcagcttgatctaaaagctttccagaagttgccagct
ctctatggaaaccttccttcagagctcattggggaaccactggaggatctcgacccttac
tacaaagatcataaggttttcatagtgctaaacaagcagaaaacaatctacagatttact
gctacacgtgccctgtggatcttcagtccctttcatccaatacgaagaagagcaattaaa
attctagtacttacattattcacctggtttatcatgtgcaccatattaactaattgtgta
ttcatggctctgactgagtcgtcgtcatcttcatggaacacatatgttgaatttactttc
actggcatttacacttttgaatcattgataaaaatattggcaagaggattctgtctaaat
gaattcactttccttcgggatccctggaactggttggatttcaccgttatcgtcatggcg
tatgtgggagcatttagccgcttggggagtgtgtcagtccttcggactttcagggttctg
agagctttaaaaaccatttcagtagttccaggactcaagatcattgtaggggcacttatc
cagtctgttaagaaactcgctgatgtgatgatcctgactgttttctgcttgagtgtcttt
gccctcataggcctccagctttttaagggcaatctcagacaaaagtgcatcaggaacact
acagagttttgtaataaaacatgggaaagttatgaagagtttgctaatgattcagtgaat
tattttgctaggaaaaatggtactgtggatattttgctgtgtggtcatggtgctggggtc
tgtcctcctggctataaatgctgtaaaattgggccaaatcctgattatggtttcaccagt
tttgatacatttggctgggcttttctttccttattccgcctgatgacccaggactactgg
gagcgtctgtaccaacagaccctcagagcttctgggaaggtgtatatagtcttcttcatg
atggtcatctttctgggctcattttatctagtcaacttgattctggctgtagtaacaatg
gcatatgaggaccagaacaaggccaccattgccgaaaccgaggcaaaggaaaggaaattt
cgggaagccatggaattattgcagaaggggcaagagtcattgggcattaaagggattgat
atcctgtcacttagctcctttgaagcctcttctctgtctaccaaagaagtcaaagaaagg
aacaataggaaaaagagaaataagtcattggggatagaagataatgaagaagaagaagta
ttccccaagtcacagcacccagacagtcaacgaaagttgtctctcctcggcctggtgtac
ggccccaacgccacccaggcgaagcgcaggctgagccacggtagcgtgttcaacttccaa
atgcccaccgtggacgtgggttccagggcagatttcagtgatgaggagacccacggcgct
gggggacacaaaacccggtgccagtccctgtcgggaacgcagatgggaagacgctccagc
ctgcaaagccaaaggggccacagctcccaccccgcgaccccgaactgcgtgcggagcagc
aagggcgccaacgtggatgaccaccttggggtgggtttgggggtgggaggagggagcagc
agggtgcacagccaagatccagtgtcctctgaaggagtcatgcttccaccagtcatggaa
gactcgggaaagagggatctgccagctgtgcataatgagagcagcatgatgcatttacct
cctcatctgtcagcggagtactttaatgaggctcttcagagacaaagggcagcaagtgtc
gtcagcataattaccagtgtcttggaggaacacgaagaagctcagaggaaatgcccacca
cgcctgaagaactttgctttaaagtatctaatttgggactgttgtccactttggttgaga
atcaaggaaaaagtggctgctttcataaaggatcctttttttgatctcaccatcaccctt
tgcattgtgatgaacactttgttcatggcactggagcacaataacatgtcacccactttt
aaattcatgcttaaaataggcaacttggttttcacaggaatcttcactgcagaaatgatc
ttaaaaatcatcgctctagatccctattattattttcagcagccctggaatatttttgac
agtgtcattgtgacactgagtttaattgaactgagtttccccaaacacaaaagcaagaaa
gaaaggcgaaaaggaggaaccctgtcagttttacgatccttcagactgctgagggtcttc
aaactggcaaagtcctggccaactttaaacactctaattaaaataatttgtaactccctg
ggagcactgagtaatctgaccctcgtcctggcaatcatcattttcatttttgctatagta
gggatgcaactttttgggaaaaattatgtgctcaactgctctaaaataaacaaagactgc
aagccacgctggcacatgaaggactttttccattcattcctcgtcattttccgaattctg
tgtggagaatggattgagaccatgtgggactgcatggtggttgctgaaccctcactgtgt
cttgttgtctttctgctggtcatggtgataggaaatttagtggttctcaaccttttcatt
gcattgctgctgagttcttttagtactgacagtctccagacaacagaggatgatggagaa
atgaacaatcttcggattgccttcgctcggatccgcaagggattccactttgtcaagagc
gtgacgtgggatgcctgttgtaggaagctcaggcagataaagaaaatacacaggaagaaa
atcagattgactgcacagaactcacttccttgcacagaaacaaagagttgtaaagagaat
tacaataatgaatggattgagaaaaacaaggacaaatgcccaggccttgaagactttgtt
agcaaccccaatatatttgtttgtgtccctattgctgaggcagagaatacaagtgagggt
tttgaagatgacgataaactgagctcatttacagacacagaacacagcaaacagttggac
agtgtcagctcttctgaagtcagcacagtggatctgacaaatcctgaagatgttttaaag
cagattccagaattttctgaagacttcaagactccagaacaatgttttccagaaggttgt
gttcggtactttcattgttgcctgggtagtgctgtaaagtttggaggagaaacctggtgg
aatctgagaaaaacctgctaccagattgttgaacattcttggtttgaatcctttatcgta
ttcatgattcttctgagcagtggagccctggcatttgaagacatccatattcataagaga
gaaagaattcaagcgatattgggatttcttgacaaaatgttcactttcatctttgttctg
gaaatgctcctgaagtgggtggcttatggcttcaagaagtattttaccaatgcctggtgc
tggctggacttccttattgtaaatgtctcgttggtaaacctctttggcagtacctttggc
cccatgaaatctcttaggactctgcgagctctgagacccttgagagcattgtcacggttt
gagggaatgagggttgtcgtcaatgccctcctgggagccatcccttccatcatgaatgtt
ctgcttgtctgcctcatcttctggctcatcttcagcatcatgggagtgaacctctttgct
gggaagtttgggaaatgtgtcaatatgacagatgaaaattctgaattaaatagctccatc
gacaacaaaacagactgtgggatgtataacaacactggaaaaatattctgggtcaacgtt
aaagtcaattttgataatgttggctctggctacctggctcttcttcaggtggcaacattt
aagggttggacggacatcatgtatgcagcagtagattcacgagagaaagatgatcagccg
aagatggagaacagtttgtatatgtatctctactttgtgaacttcatcatctttggatct
tttttcaccctgaacctctttgtcggtgtaatcattgacaacttcaaccaacaaaagaaa
aagataagtggggaagatatctttatgacagaagaacagaaaaaatactacaatgcaatg
aaaaagttgggatccaagaaacctcaaaaacctattccaagaccactgaacagatatcaa
ggcttccttttcgacattgcaacatcccaaatctttgatgttgtcatcatgggtctcatc
tgcctcaacatgatcacgatgatggtggaaacctatgagcaaagtgaaacgaagacaaac
gtgctcagcaaaatcaatatactctttgttaccatctttactgcagaatgtgtgctgaaa
ttgctggctctgaggcagtactatttctcaaatgcctggaacatatttgatttagttgtt
gttattatatcacttgttgccttactgctttccagcattggcaaagccttcgaacatctc
ttaccacccacactcttcagggtcattcgcttggtccggattgggcggatcctgagactc
atccggggagccaaaggaattagaactctgctttttgccttaatgatgtctctacctgct
ctgttcaacattggcctcttgctgtttctggtcatgttcatttatgccatttttggcatg
gctaactttgcctatgtgaagatggaaggtggcattgacgatatgttcaacttccaaacc
tttgctaacagcatgctctgtctcttccaaatcaccacatcagctggctgggatggtctt
ctcagtcctattttaaacactgggccaccctactgtgatccaaacgtaaaaggtaccata
ggtgaatgtggtaaacctgccataggtattatttattttgtaagttacatcattatatca
tttctcattgttgtaaacatgtatatagctgttattctagagaacttcaatgttgccact
gaggaaagtacagagcctttaggggaagatgactttgacatcttttatgaaatctgggag
aagtttgatcctgaggcaacccagtttataaccgtctctgtactttcagactttgcagat
gctctgtctaagcctttgcgtgtaccaaaaccaaacaaagttgaactcacagcaatggac
ctgcctgtggtcagtggggacaagatacactgcttggatatcttgtttgctttcaccaag
agggtgttgggagattctggggagctggattctctgaaagtacaaatggaggagaaattc
atggctgccaacccatcaaaacaatcctacgagccaatatcaactacactcagacacagg
caagaggaagcatcggccacggtgatccagcgtgcctacaggtgtcacctgctcctgcgc
tccctcaaacaggcttcctacctgtaccagcgcagaacttgcagcactgacactctgggg
gatgctgctccagaaaacgaaggacttattgcatctatgctgcgtgcaaattacggtagg
agtgctaacaagtctgaaacttcatcctcagtgtccatccctccgtcgtatgacagcgtc
acaagggagagtagtggcaatctcatggttgagaatggagaaataacaggcaatcaacaa
tctccaggtgttaagtag
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