Corvus brachyrhynchos (American crow): 103624749
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Entry
103624749 CDS
T08418
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X3
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
cbrc
Corvus brachyrhynchos (American crow)
Brite
KEGG Orthology (KO) [BR:
cbrc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cbrc01002
]
103624749 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cbrc04121
]
103624749 (USP47)
Enzymes [BR:
cbrc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103624749 (USP47)
Peptidases and inhibitors [BR:
cbrc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103624749 (USP47)
Ubiquitin system [BR:
cbrc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103624749 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Sad1_UNC
Motif
Other DBs
NCBI-GeneID:
103624749
NCBI-ProteinID:
XP_008642276
LinkDB
All DBs
Position
Unknown
AA seq
1363 aa
AA seq
DB search
MFWSCRQSIFAEMKKKFSQAESAAEEPRVLCIIQDTTNSKTVNERITLNLPASTPLKRLF
EDVASKVGYVNGSFDLMWGNGDNVTDTTPIDQNSDKTILDAGFEPGKKNFLHLTDKDGEQ
PHVMPEESGTTDDSAQERFIGPLPREGSIGCTNDYVSQSYSYSSVLSKSETGYVGLVNQA
MTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPERSIPYQLQRLFVLLQTSKKRAIETT
DVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLEC
GYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPNQYFCERCKKKCDAR
KGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSVFIDVEDEKSPQTESC
TDSGAENEGSCHSDQMSNDFSNDDGVDEGICLESNSAAERISKAGSEKSSLLYELFSVMV
HSGSAAGGHYYACIKSFSDDQWYSFNDQHVSKITQEDIKKTYGGSSGSRGYYSSAFASST
NAYMLIYRLKDPTRNAKFLEAHEYPEHIKQLVQKERELEEQEKRQREIERNTCKIKLFCM
HPTKQIMMENKLEVHKDRTLKEAVEIAYKLMDLEEAVPLDCCRLVKYDEFHDYLERSYEG
EEDTPMGLLLGGVKSTYMFDLLLETRRPDQIFQCYKPGEVMVKVHVVDLKTESVAPPISV
RAYLNQTVSEFKQLISKATHLPAETMRVVLERCYNDLRLLNVSSKTLKAEGFFRSNKVFI
ESSESLDRHVTYTDSQLWKLLDRHANTIRVYVSLPEQAPASQLRRALYQKSSGGAGNLDE
PCERVKGPVGNMKSVEAILEESTEKLKSLSLQQQQQQEGDNGDSSKSTEASDFENIESPL
NEIDSSASAENRELENQIQISDPENLQSEERSDSDVNNDRSTSSVDSDILSSSHSSDTLC
NVDNAPLPLANGLDSHSITSSRRSKANQGKKETWDTAEEDSGTDSEYDESGKSRGEAQYM
YFKSEPYTAEEGSGEGQKWLMVHVDKRITLSAFKQHLEPFVGVPSSHFKVFRVYASNQEF
ESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEPEPCKFLLDAVFAKGMTV
RQSKEELLPQLREQCGLDLTIDRFRLRKKTWKNPGTVFLDYHIYEEDINISSNWEVFLEI
LDGVEKMKSMSQLAVLSRRWRPSEMKLDSFQEVVLESSSVEELKEKLSEISGIPLENIEF
AKGRGTFPCDISILEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDKTEELMELTDEQR
NELMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atgttttggagttgcagacagagtatctttgctgaaatgaagaagaaattttcacaggca
gagagtgctgctgaggagcccagggtgctgtgtataatacaggacaccacgaattccaag
acagtgaatgagcgtattaccttgaacctgccggcttccaccccacttaaacggctcttt
gaagacgtggcttccaaagtgggctacgtgaatggatcttttgatttgatgtggggcaat
ggagataatgtcactgacacgactccaatagatcagaacagtgacaaaaccattcttgat
gctggttttgagccagggaagaagaactttctgcatctgacagacaaggatggagagcag
cctcatgtaatgccggaggagtcaggtacaacagatgacagtgcacaggagagattcata
ggcccccttccaagagaaggctctattggatgtaccaatgactatgtcagtcaaagctac
tcttattcttcagtcctgagcaaatcagagacaggttatgtggggctggtaaatcaagca
atgacttgctacttgaacagccttctgcaaacacttttcatgactcctgaatttagaaat
gcattgtataagtgggaatttgaagaatctgaagaggatcctgagaggagtatcccctac
cagcttcaaaggctgtttgttttactgcagaccagcaaaaaaagggcaattgaaacaaca
gatgtcacacggagttttggatgggatagtagtgaagcatggcagcagcatgatgtacag
gagctttgtagagtcatgtttgatgctttggagcagaaatggaagcaaacggagcaggct
gatcttataaatcaactgtatcaaggcaaactgaaggactatgtgagatgtctagagtgt
ggctatgaaggctggagaatcgacacttacctggatatccctttggtcatccggccctat
ggctccagccaggcgtttgctagcgtggaagaagcactgcatgcttttattcagcctgag
atccttgatggcccaaatcagtacttttgtgagcgatgtaagaagaaatgtgatgcaagg
aagggtctgcggttcttgcattttccatacctgctgacattacagctgaagagatttgac
tttgattataccactatgcacagaattaaactcaatgatcgcatgacttttccagaggag
ctggacatgagtgtctttattgatgttgaagatgagaagtctcctcagactgagagttgc
actgatagtggagctgaaaatgaaggcagttgtcacagtgaccagatgagcaatgatttt
tctaatgatgatggagttgatgaaggaatctgccttgaaagcaacagtgcagcagagagg
atctctaaagctggcagtgaaaagagttctttactgtatgagctcttttctgtcatggtt
cattctggaagtgctgctggtggccattattatgcctgtataaaatcttttagtgatgat
cagtggtacagctttaatgatcagcatgttagcaagataactcaggaagatattaagaaa
acatatggaggatcttctggaagcagaggctattattccagtgcttttgctagctccaca
aatgcttacatgctgatatatagactgaaagatccaacaagaaatgcaaagtttcttgag
gcacatgaatatccagagcacattaaacaattggtacagaaagaaagagaattagaagaa
caagaaaagaggcaacgtgaaattgaacgcaacacgtgcaagattaaattattctgcatg
catcctacaaagcaaataatgatggagaacaaattggaagtccataaggacagaacactg
aaggaagctgtggaaatagcttacaagttaatggatttggaagaggctgttcccttggac
tgctgtcgccttgtcaaatacgatgagtttcatgactacttggagcgctcctacgaagga
gaggaggatactccaatgggtttgttacttggaggggtcaagtcaacgtacatgtttgat
ttactgttggaaacaagaaggcctgaccaaattttccagtgctataagcctggtgaggtc
atggtaaaggttcatgtagtcgacctgaagactgaatctgttgctcctccaataagtgtg
cgagcttatttgaatcaaacagtttcagagttcaaacagctaatttcaaaggccacgcac
ctgcctgctgaaaccatgcgggtcgtgttggaacggtgctacaatgacctgcgtcttctg
aacgtctccagcaaaacactgaaagctgaaggcttttttagaagcaacaaggtatttatt
gaaagctccgagtctttagaccgtcacgtgacatacacagactctcagttgtggaagctt
ttggatcgccatgcaaacacaatcagagtgtatgtttcattgccagagcaagctcctgca
tctcagcttagacgagcgctttatcagaagtctagtggaggtgcaggcaacttggatgaa
ccttgtgagagagtaaaaggacctgtaggtaatatgaaatctgtagaggcaattttggaa
gaaagcactgaaaaacttaaaagcttgtccctgcagcaacagcagcagcaggagggagat
aatggagacagcagcaaaagcacagaagccagtgattttgaaaacattgagtcaccttta
aatgaaatagactcttcagcatcggcagaaaacagagaacttgaaaaccaaattcagatt
tctgatccagaaaatctgcagtccgaggagcggtcagactcagatgtcaataacgacagg
agtacgagctcagtggacagtgacatcctcagctccagccacagcagtgacactttgtgc
aacgtggacaatgcccccctccccctggctaatggacttgactctcacagcatcacaagt
agtaggagatcaaaagccaatcaggggaagaaggaaacctgggacacagcagaagaagat
tctggaacagacagtgaatatgatgagagtggcaagagcagaggagaagcacagtatatg
tactttaaatcagaaccctacactgcagaggagggttcaggagaagggcaaaaatggctg
atggtgcatgttgataaaagaattacactgtctgccttcaagcaacacttggagcctttt
gttggagttccatcttctcacttcaaagtctttagagtctatgccagcaatcaagagttt
gagagcgttcggctgaatgagaccctttcgtcattttctgatgacaataagataactatt
agacttggaagagcccttaagaagggtgaatacagagtcaaagtctatcagcttttggta
aatgagcctgagccatgcaagtttcttctagatgcagtttttgctaaaggaatgactgtc
cgacagtccaaagaggagctgcttcctcagcttcgagaacaatgtggcctagacttgaca
attgacaggtttcgcctacgaaagaaaacatggaagaatccaggcactgtgtttctggat
tatcatatctatgaagaagatatcaatatttccagcaattgggaggtcttcttagaaata
cttgatggagtagaaaagatgaaatccatgtcacaacttgctgttttatcgagacgatgg
aggccgtcagaaatgaaattagattctttccaggaagtcgtactagaaagcagcagtgtc
gaagaattaaaagagaagctaagtgaaataagtggaatacccttggaaaacatagaattt
gcaaagggtagaggaacctttccatgtgacatttccatactagagattcatcaagacttg
gactggaatccaaaagtatctacattgaatgtctggcctctgtacatttgtgatgatggt
gcagtaatattttatagggataaaactgaagagttaatggaattaacagatgagcaaaga
aatgaactgatgaaaaaagaaagcagcagactccagaaaactggacaccgggtaacctac
tctccccgtaaagaaaaagcactaaaaatttatctggatggagcaccaaataaagatttg
actcaagactga
DBGET
integrated database retrieval system
