Clostridium botulinum E3: CLH_3197
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Entry
CLH_3197 CDS
T00767
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
cbt
Clostridium botulinum E3
Pathway
cbt00521
Streptomycin biosynthesis
cbt00523
Polyketide sugar unit biosynthesis
cbt00541
O-Antigen nucleotide sugar biosynthesis
cbt01100
Metabolic pathways
cbt01110
Biosynthesis of secondary metabolites
cbt01250
Biosynthesis of nucleotide sugars
Module
cbt_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
cbt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CLH_3197 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CLH_3197 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CLH_3197 (rfbC)
Enzymes [BR:
cbt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CLH_3197 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ACD52050
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All DBs
Position
complement(3458012..3458590)
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AA seq
192 aa
AA seq
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MGNFIFNKTSIDGVYIIEPKVFGDNRGYFMETYNREQFLEAGLDMTFVQDNESRSTKGVL
RGLHFQKKHSQGKLVRATKGEVFDVAVDLRHGSPTYGKYEAVILTEENKKQFYIPEGFAH
GFLVLSDEAVFNYKCTDLYAPEYDGGVMWNDNDINIKWPLDKIEDIVLSEKDKVHPNLKD
LDLKNYSDFMYK
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgggaaattttatttttaataaaactagtatagatggggtttatataatagagcctaag
gtatttggagataatagaggttactttatggaaacttataatagagaacagtttttagaa
gctggacttgatatgacttttgttcaagacaatgaatcaagatctactaaaggtgtactt
agaggccttcattttcaaaagaaacatagtcaaggtaaattagttagagcaactaaaggt
gaagtttttgatgttgctgttgatttaagacatggttcacctacttatggtaagtatgaa
gctgttattttaacagaagaaaataaaaaacaattttatattccagaaggttttgcacat
ggatttttagttctttctgatgaagcagtatttaattataaatgcacagatttatatgca
ccagaatatgatggtggagttatgtggaatgataatgatataaatataaaatggcctttg
gataaaattgaagatatcgttttatcagaaaaagataaggttcatcctaatttaaaggat
ttagatttaaagaactattcagattttatgtataaataa
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