Coxiella burnetii RSA 493: CBU_1934 Help Entry CBU_1934          CDS       T00124                                  Name (RefSeq) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism cbu  Coxiella burnetii RSA 493 Pathway cbu03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:cbu00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     CBU_1934  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cbu03400]     CBU_1934 Enzymes [BR:cbu01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      CBU_1934 DNA repair and recombination proteins [BR:cbu03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      CBU_1934 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol LigD_N DNA_ligase_A_C DNA_ligase_A_M DNA_primase_S Motif Other DBs NCBI-GeneID:  1209847 NCBI-ProteinID:  NP_820911 UniProt:  Q83AG5 LinkDB All DBs Position 1851074..1853521 Genome browser AA seq 815 aa AA seqDB search MILLSLKHYRQKRDFTKTSEPQGESASSSQQFIYVIQKHDASHLHYDLRLELDGVLKSWA VPKGPSLNSDLKRLAVEVEDHPIDYATFEGNIPKGQYGAGPVIVWDKGTWQPEGNAKENL KKGKLVFIINGEKLKGKWALVRLKTDDYKNNWLLIKKKDHYATERFDIDNYPLSVISGAS IEEIKNHKLALSLSDLKNAKKTVVPEFIQPQLAKLKTVVPDSPDWIHEIKFDGYRIICII KKGIIQLMTRNQKNWTEKLAGLAETMKSIPIDESILDGEIVVFDESGKTDFQLLQNAIKA KKYNEIKYYLFDIPFCQKFDLSQVPLIMRKRLLKKLILQWKEKSGSILYSSHIKGNGKAI LERACELGLEGIISKKIDAAYEQRRSSSWIKLKCKRQQEFVIGGYTKPRGEQLYFGALLL GYYQNKKLIYCGRVGTGFSSLSLKDIYEKLINREQKAPAFSELPTFGIKAGNHWVKPELV AEIEFAEWTKDKRLRQPVFKGLREDKEAKGVKLETVKKTTVKNKPNNIKLTNPEKILYPE EKITKRQLADFYSKIADRLLPHIVHRPLMLLRCPNGYNKECFFQKHPDQNGEEFVYSVEI EEKERKRYLTIHDEKGLLALVQMGVLEIHPWGSSDSHPEKPDRLIFDIDPHPAVSWKAVI NCATDVFEVLKALGLRSFVKTSGGKGLHVYVPIQPQLGWEKLHEFAQKLAKLIVQVNPRL YTAELSKGKRLNKIFIDYIRNNRGATCVAPYSTRAKKHVPLSTPVSWDELSAVKSPTQFT IKNIFHRLEALNQDPWEEFFDIKQSITASMWKFFS NT seq 2448 nt NT seq  +upstreamnt  +downstreamnt gtgattctgttgagcctgaaacattatcgccaaaaacgagattttaccaaaacctccgaa cctcagggggaaagtgcttcctctagtcaacagttcatttacgtgattcaaaaacacgat gcttcacatttgcattacgaccttcgcttagaattagacggtgtactgaaaagctgggcg gttcctaaagggccttccttaaattctgatctaaaacgattagctgtcgaagtggaggac catcccatcgattacgccacttttgaaggtaatatccctaaaggacaatatggtgcgggt ccggttattgtttgggataaaggtacctggcagcccgaagggaatgcaaaagagaattta aaaaaaggaaagctcgtctttattattaatggtgaaaaattaaagggaaaatgggcgcta gtaaggcttaaaaccgacgattataagaataattggctattaattaaaaaaaaagatcat tatgccaccgaacgttttgatatcgataattatccattaagcgtaatcagtggcgcttcc atagaagaaattaaaaatcacaaacttgccctatcgctaagcgacttaaaaaatgcaaaa aaaacagtagttcctgaatttatccaaccgcaactcgctaaattaaagacagttgtgccc gattcaccggattggattcacgagattaaatttgatggctatcgaatcatttgtattatt aaaaaaggaattattcaattaatgacacgaaatcaaaaaaactggactgaaaaattagcc gggcttgcagaaacgatgaaatcaatacctatcgatgagtcaatactggatggagaaata gttgttttcgatgaatcggggaaaacagatttccagcttctgcaaaatgccatcaaagcc aagaaatacaatgaaataaaatattatctctttgatattcctttttgccagaaatttgat cttagccaagtgccattgataatgagaaaacgattattaaaaaagttaattttacaatgg aaagaaaaaagtggaagcatactttattccagtcatataaaaggaaatggaaaagctatt ctagaacgtgcttgcgagttgggtttggaaggaattatttccaaaaaaatcgatgctgct tatgagcaacgaagaagctctagttggataaagctcaagtgtaaacgacagcaagaattc gtgattggtggctatacaaaaccgcggggagaacaactctattttggcgctttattatta ggctattatcaaaataaaaaattaatttattgtgggagggttggcactgggtttagcagt ctatcgttaaaagatatttatgaaaaattaataaatcgcgaacaaaaagcccccgccttt tctgagttacctacttttggaataaaagcaggcaatcattgggtaaaacccgaattagtg gctgagattgaattcgctgagtggacgaaagataaacgtttgaggcagccggtttttaaa gggttgcgtgaagacaaggaagctaaaggagttaaattagaaacagttaaaaaaacgaca gtcaaaaataagcctaataatattaaattaaccaaccctgaaaaaattctataccccgaa gaaaaaatcacgaaacgccagttggcggatttttatagcaaaatagccgatcgcttactg cctcacatcgttcaccgcccgttgatgctgcttcgttgtccgaatggctataacaaagaa tgtttttttcaaaaacatcctgatcaaaatggcgaggaatttgtttatagcgttgaaata gaagaaaaagagagaaaaaggtatctgacgattcatgatgaaaaaggccttcttgcatta gttcaaatgggcgtcttggaaattcacccgtggggcagcagcgattcgcatccggaaaaa ccagaccgattaatttttgatattgatccgcatccggcggtcagttggaaagccgtgatt aattgcgcgactgatgtttttgaagtattgaaggctttgggtttgcgaagttttgttaag acttctggaggaaaagggttgcacgtgtacgttcctattcagccgcaattgggttgggag aaactgcatgaattcgcgcagaagttggctaaattaattgttcaggttaatccacgtctt tatacagctgaattgagtaaaggaaaacggctcaataaaatatttatcgattatattcga aataaccgaggcgccacttgtgtggcgccttatagcacccgagcaaaaaagcatgtccct ctttccaccccggtttcctgggatgaattgtcagcggtaaaatcccctacccaatttacg ataaaaaatatattccatcgcctggaggcattaaaccaagacccttgggaggagtttttc gacataaaacaatcaatcactgcctcgatgtggaaattttttagttaa

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