Clostridium butyricum: ATN24_03715
Help
Entry
ATN24_03715 CDS
T04197
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cbut
Clostridium butyricum
Pathway
cbut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ATN24_03715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbut03021
]
ATN24_03715
03019 Messenger RNA biogenesis [BR:
cbut03019
]
ATN24_03715
Transcription machinery [BR:
cbut03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ATN24_03715
Messenger RNA biogenesis [BR:
cbut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ATN24_03715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
Spore_III_AA
NACHT
AAA_25
AAA
AAA_14
Motif
Other DBs
NCBI-ProteinID:
ALP89271
UniProt:
A0A7X4LFD0
LinkDB
All DBs
Position
1:785517..787052
Genome browser
AA seq
511 aa
AA seq
DB search
MIKQDYESMTLSKLKEIAKELEIKNISKYKKNELIEEIISVSPNSIKKDGVILRENISPK
AVEKIQRSDLEMKNSSSNSENSKIHTGEDKRETSNIKDRNFEKNVKRDYSENQNVNNNRN
DDSQNEKKEVLREMINESNSAKGILEILENNNFGFLRCKNYLTSSEDIYVSPSQIRRFNL
RTGDEVEGKIREAKESEKFKALLFVQKVNGEAPEKAIGRKSFETLTPIYPTERLKLETQN
SGDLSSRLMDIICPLGKGQRGVIVAPPKAGKTTLLKKVAQNIVKNYPDIKLIVLLIDERP
EEVTDMIRSINGDVVYSTFDEEPQNHAKVSQMVLERAKRMVEQGKDVVILMDSITRLSRA
YNLTITPTGRTLSGGLDPGALIMPKKFFGAARNIEEGGSLTILATALVETGSRMDDMIFE
EFKGTGNMEVHLDRRLQERRIFPAIDVYKSGTRKEDLLLSKEELEVAFSIRKIMYKDGNA
DDVTENLINMLSKTKNNEEFIETFKKNNFKK
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
ttgattaaacaagattatgaaagcatgaccttaagcaaattaaaggaaattgcaaaagaa
ttagaaattaagaatatatcaaaatataagaaaaatgaactgatagaagaaataataagt
gtttctccaaattcaataaaaaaagatggagtaattcttagagaaaatatttctccaaaa
gcagttgaaaaaatacaaagatcagatttagaaatgaaaaattcaagcagtaattcagaa
aattcaaagatacatactggtgaagataaaagagaaactagtaatataaaagatagaaat
ttcgaaaagaacgtaaaaagagattacagcgaaaatcaaaatgtaaataataatagaaat
gatgattctcaaaatgaaaaaaaagaagtattaagagaaatgataaatgaatctaatagt
gctaaaggtatattggaaatactggaaaataataattttggatttttaagatgcaaaaat
tatttaacaagcagtgaagatatatatgtatcgccatcacaaattagaagatttaatttg
agaacaggtgatgaagttgaaggtaaaataagagaagccaaagaaagcgaaaagtttaaa
gcgttattatttgttcagaaagttaatggtgaagcacctgaaaaggcgataggaagaaaa
tcttttgaaacattaactccaatatatccaacggaaagattaaaacttgagacacaaaac
agtggagacctttcatctagactgatggatataatatgcccattaggaaaaggtcaaaga
ggtgttattgtagctccgcctaaggctggaaagactactttattaaaaaaagtagcacaa
aacattgttaaaaattatccggatataaagcttatagttcttcttatagatgaaagacca
gaagaagttacagatatgattagatctataaatggagatgtagtttattcaacatttgat
gaagaaccacaaaatcatgctaaggtttctcaaatggttttagaaagagccaaaagaatg
gttgagcaaggaaaagatgtagttatacttatggatagtataactagattatctagagct
tacaacttaacgataacaccaacaggaagaactttatcaggaggtcttgatcctggagcg
ttaataatgccaaagaaattttttggtgcagcaagaaatattgaagaaggtggaagtctt
acaattttagctacagcacttgttgaaacaggttcaagaatggatgatatgatttttgag
gaatttaaaggaacaggaaatatggaagttcatcttgatagaagacttcaagaaagaaga
attttcccagcaattgatgtatataaatcaggtactagaaaagaagatttattattatct
aaagaggaacttgaagtagcattttcaattagaaaaattatgtataaggatggaaatgca
gatgatgttactgaaaatcttataaatatgctttcaaaaactaaaaataacgaagagttt
attgaaacttttaagaaaaacaattttaagaaataa
DBGET
integrated database retrieval system
