Clostridium butyricum: ATN24_07680
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Entry
ATN24_07680 CDS
T04197
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cbut
Clostridium butyricum
Pathway
cbut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ATN24_07680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbut03019
]
ATN24_07680
03016 Transfer RNA biogenesis [BR:
cbut03016
]
ATN24_07680
Enzymes [BR:
cbut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ATN24_07680
Messenger RNA biogenesis [BR:
cbut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ATN24_07680
Transfer RNA biogenesis [BR:
cbut03016
]
Prokaryotic type
tRNA degradation factors
ATN24_07680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
KH_2
EXOSC1
Par3_HAL_N_term
Motif
Other DBs
NCBI-ProteinID:
ALP90018
UniProt:
A0A5Q2SXY6
LinkDB
All DBs
Position
1:1680993..1683098
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AA seq
701 aa
AA seq
DB search
MNNVLSTEIAGRELKVEFGKVGMLSNAATFTSYGDTVIMTNVNASEEPREGIDFFPLSVE
YEERLYAVGKIPGGFIKREGRPSEKAILNGRAVDRTIRPLFPKGYRNDVQVVTTVVSVEK
DNIPEILAINAASLALCLSSIPYTIPVAAVQVGLIDGKLVTNPDSKGREESILHLTVCAT
KERVMMIEAGGNEIPEDKMIEAIEYGFNECQKIISFQEEAMAKFGKKKDEPLLYTIDETL
EKEVKDFAFDMVKEAMYIMDKDERNAAIDAVNEKVKAEFAEKYPDNLGDIKEVLYTTQKK
IVRNMLLNEKRRPDGRAFDEVRPLGCEVGILPRTHGTGLFTRGLTQVMTVATLGSISEIQ
ILDGIDETQSKRYMHHYNFPGYSVGEVKPLRGPGRREIGHGALAERALEPLIPSEEEFPY
TIRLVSEVLSSNGSTSQASVCGSTLALLDAGVPIKRPAAGIAMGLITSEDLSQEQVITDI
QGIEDFFGDMDFKVAGTTEGITSIQVDTKLQGFSFNVVENAIRDARKARLKIIDKINECM
PEPRKDVSLYAPKTEVMTINPDKIRDVIGAGGKVINKIIADTGVKIDIKEDGTVFVSSSD
HEGVNAAKKIIEGLTKEVVAGEVYLGKVTKITTFGAFVEILPNKEGLVHISKLAKERVEK
VEDVVSAGDEILVKVTEIDNQGRINLSRKDAIAEQDEKEDK
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgttctaagcaccgaaatcgctggaagagaacttaaagttgaattcggaaaa
gtaggtatgttatcaaatgcagcaacatttactagttatggtgacacagttattatgaca
aatgttaatgcatcagaagaaccaagagaaggaattgatttcttcccattaagcgttgaa
tacgaagaaagactatatgcagtaggtaaaatcccaggtggatttataaaaagagaaggt
agaccatcagaaaaggctattttaaatggtagagccgttgatagaactatcagaccttta
tttccaaagggatatagaaatgatgttcaggttgttactacagtagtatcagttgagaag
gataatattccagaaatattagctatcaatgcagcatcacttgcgttatgcttatcaagt
attccatacacaattccagtagcagcagttcaagttggactaattgatggaaagcttgtt
actaatccagacagtaaaggaagagaagaaagtattcttcatttaactgtatgtgctaca
aaagaaagagtaatgatgatcgaagctggtggtaatgaaataccagaagataagatgatc
gaagctattgaatatggatttaacgaatgtcaaaaaataatttctttccaagaagaagct
atggctaaatttggtaagaaaaaagatgaacctttactttatactatagatgaaacttta
gaaaaagaagtaaaagattttgcttttgatatggttaaagaagctatgtatattatggat
aaagatgaaagaaatgcagcaattgatgcagttaacgaaaaagttaaggctgaatttgca
gaaaaatatccagataacttaggtgatataaaggaagttttatacactactcaaaagaag
attgtaagaaatatgcttctaaatgaaaagagaagacctgatggaagagcttttgatgaa
gtaagacctttaggctgtgaagttggaatacttccaagaactcatggaactggattgttt
acaagaggattaactcaagtaatgacagttgcaacattaggttcaataagtgaaattcaa
attttagatggtattgatgaaacacaatctaaaagatatatgcatcactataatttccca
ggatatagtgttggtgaagtaaaacctttaagaggtccaggaagaagagaaattggtcat
ggagctttagcagaaagagcccttgaaccattaatcccatctgaagaagaattcccttat
acaataagattagtatcagaagttttaagttcaaacggttcaacatcacaggcatctgta
tgtggatcaacattagcattattagatgcaggtgttccaataaaaagaccagcagcaggt
attgctatgggattaataacttctgaagatttgagtcaagaacaagttataacagatatc
caaggtatagaagatttctttggtgatatggactttaaagttgcaggtacaacagaaggt
ataacatctatacaagttgatactaagcttcaaggtttcagcttcaacgttgttgaaaat
gctataagagatgctagaaaagctagattaaaaattatagataaaataaatgaatgcatg
cctgaaccaagaaaagatgtttctttatatgcaccaaaaactgaagttatgactataaat
ccagataagatcagagatgtaatcggagcaggtggtaaagttattaataaaataatagct
gatactggcgttaagatagacattaaagaagatggaacagtatttgtaagttctagtgat
catgaaggtgtaaatgcagctaagaagataattgaaggattaacaaaagaagttgtagca
ggtgaagtttacttaggtaaagttactaagataactacttttggagcttttgtagagatt
cttccaaacaaagaaggattagttcatatttcaaagttagctaaggaaagagttgaaaag
gtagaagatgttgtttctgctggagatgaaatcttagttaaggttactgaaatagataat
caaggaagaataaatctttcaagaaaagatgcaattgcagaacaggatgaaaaggaagat
aaataa
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