Cupriavidus basilensis: RR42_s0837
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Entry
RR42_s0837 CDS
T03642
Name
(GenBank) Transcriptional regulator, IclR family
KO
K20329
IclR family transcriptional regulator, positive regulator for flagellar biogenesis
Organism
cbw
Cupriavidus basilensis
Pathway
cbw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cbw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RR42_s0837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbw03000
]
RR42_s0837
Transcription factors [BR:
cbw03000
]
Prokaryotic type
Helix-turn-helix
IclR family
RR42_s0837
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_IclR
IclR
MarR_2
MarR
HTH_24
HTH_5
HTH_36
DUF883
HTH_20
HTH_26
HTH_11
HTH_Crp_2
TrmB
HTH_31
Dimerisation2
Motif
Other DBs
NCBI-ProteinID:
AJG22427
UniProt:
A0A0C4YAA5
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Position
secondary:920641..921420
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AA seq
259 aa
AA seq
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MTQSSPVTLTLERGLKVLRAFRAERVPLTNSELVRRTGLSKSTVSRLTMTLVGLGFLRRV
AGGPQFELAGGPLGIGHAYLETNAVTRLAHPFMQQLADRLNASVALAVPNQLDMLYIAYR
TSTRIATLRLGVGSLLPMGLTAIGRAWLWGLPKDARADYVASVIEAAGPQAGDIRKNIEA
AFDDLRETGVCMSVGEYQRNAYGIALPLSVGRAGMLMALNCGAVELRPDVESIRASMVPE
LKAAAVELMVLLRDVGTEA
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgactcaatcctcaccggtcaccttgacgctggagcgtggcctcaaggtgctgcgcgcc
tttcgcgcggagcgggtgcccctgaccaacagtgagttggtgcgtcgaacggggctctca
aagtccacggtgtcccggctgacgatgacgctggtcggcctgggcttcttgcgcagggtg
gcgggcgggccgcaattcgagctggccggcggtccgcttggcatcgggcacgcgtacctg
gaaaccaacgcggtgacacggctcgcccatccgttcatgcagcaactggccgaccggctc
aacgcgtccgttgcacttgcggtgcctaaccagcttgacatgctctacattgcctatcgg
accagcacgcgcatcgccacgctgcggctgggcgtggggtcgctgctgccgatggggttg
acggcgatcgggcgcgcctggctgtgggggttgcccaaggacgcacgggctgactacgtg
gcatccgtgatcgaggccgcgggtccgcaggcgggagacatcaggaagaacatagaagcc
gcattcgatgacttgcgcgagaccggcgtctgcatgtcggtcggcgaataccagcgcaac
gcatacggcattgcattgccgctaagcgtgggccgcgccggcatgctgatggcgctgaac
tgcggcgcggtcgaacttcggccggacgtcgagtcgatacgggcgagcatggtgccggaa
ctcaaggctgctgcggtggaactgatggtgctgctgcgcgatgtcggtaccgaggcttaa
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