Cupriavidus basilensis: RR42_s2438
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Entry
RR42_s2438 CDS
T03642
Name
(GenBank) RND efflux system, inner membrane transporter CmeB
KO
K18138
multidrug efflux pump
Organism
cbw
Cupriavidus basilensis
Pathway
cbw01501
beta-Lactam resistance
cbw01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cbw00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RR42_s2438
01503 Cationic antimicrobial peptide (CAMP) resistance
RR42_s2438
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbw02000
]
RR42_s2438
01504 Antimicrobial resistance genes [BR:
cbw01504
]
RR42_s2438
Transporters [BR:
cbw02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RR42_s2438
Antimicrobial resistance genes [BR:
cbw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RR42_s2438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
AJG24020
UniProt:
A0A0C4YNC1
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All DBs
Position
secondary:2668252..2671467
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AA seq
1071 aa
AA seq
DB search
MAKFFIDRPIFAWVIAIILMLAGLAATTTLPIAQYPTIAPPAVQISATYPGASAKTVEDT
VTQVIEQQMSGLDHLLYLSSTSDDSGTATITLTFAAGTNPDIAQVQVQNKLQLATPLLPQ
AVQQLGTKVTKSSSSFLLILAFVSKDGSMGRYDLANYVASKVLDPVSRIDGVGTVTLFGS
QYAMRIWLDASKLNNYSLTPIDVKSAVAAQNVQVAGGSLGGTPSVPGQMLQATITEATLL
QTPAQFGNILLKVNTDGSQVRLRDVARIELGGENYNFDTKYNGQPTAAFGIQLATGANAL
ATAKAVRAKMADLQRYAPQGVVVEYPYDITPFITLSIEEVIKTLIEGIVLVFLVMYLFLQ
NLRATLIPTIAVPVVLLGTFAVMSVVGFSINTLSMFGMVLAIGLLVDDAIVVVENVERVM
AEEGLSPRDATRKAMEQITGALVGVALVLSAVFVPVAFSGGSVGAIYRQFSLTIVAAMVL
SVLVALILTPALCATMLEPIPKGHHDEKTGFFGWFNRTFARSQKKYHGGVEHVIRRSGRW
LIIYLMVILVVGLLFVRLPKAFLPEEDQGTMFVLVQAPVGSTQERTAKVLLDVQEYLLNS
EKESVEAVLTVNGFSFAGRGQNSGLVFVRLKDFSQRESANLKAPALVRRIFGHFAGYKDA
NVFPLNPPSIPELGTAAGFDFELQDRAGLGHEKLMQARNMLLGMAAKDALLAQVRPNGLN
DTPQFKVDIDREKANALGVSAADIDQTFSTAWASLYVNNFLDTDNRIKKVYVQGEPRFRM
NPEDLNAWYVRNAAGTMVPFGAFGSGAWIFGSPKLERFNGIPAVEIQGSAAAGKSTGQAM
NAMEAIAQKLPDGIGYEWTGLSYQERQSGSQAPLLYGISILVVFLCLAALYESWSIPFSV
IMVVPLGILGALLAATLRGLENDVFFQVGLLTTVGLSAKNAILIVEFARDLRDQGMSNVD
AAVEAARLRLRPILMTSLAFILGVLPLALSNGAGSGSQHAIGTGVIGGMLTATFLAIFMI
PMFFVVIGKFSKTRHKPGSPPAPVPSGHAGGGNDDGSNGSNGSAGTPGQGH
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagttctttatcgaccggccaatttttgcgtgggtgatcgcgatcatcctgatg
ctggccggcctcgccgcgaccaccacgctgcccattgcccagtaccccacgattgccccg
ccggccgtgcagatcagcgccacctaccccggcgcttccgccaagaccgtcgaagacacc
gtcacgcaggtgatcgagcagcagatgagcggcctggaccacctgctgtacctgtcgtcg
accagcgacgattccggcaccgccaccatcacgctgaccttcgcggccggcaccaacccg
gacattgcgcaggtccaggtgcagaacaagctgcagctcgccaccccgctgctgccacag
gccgtgcagcagctgggcaccaaggtcaccaaatcgagcagcagcttcttgctgatcctc
gccttcgtgtccaaggacggcagcatgggccgctacgacctggcgaactacgtggcgtcg
aaggtgctggacccggtcagccggatcgacggcgtcggcacggtaacgctgttcggctcg
cagtacgccatgcggatctggctcgacgcgagcaagctgaacaactacagcctgaccccg
atcgacgtcaagagcgcggtggccgcgcagaacgtgcaggtcgctggcggcagcctgggc
ggcacgccgtcggtgccgggccagatgctgcaagccaccatcaccgaggccacgctgctg
caaacccccgcgcagttcggcaatatcctgctcaaggtcaataccgacggctcgcaggtg
cgcctgagggatgtggcgcgcatcgagctgggcggcgagaactataacttcgacaccaag
tacaacggccagccgaccgcggccttcggcatccagctcgccaccggcgccaacgcgctg
gccacggccaaggcggtgcgcgccaagatggccgacctgcagcgctatgcaccgcaaggc
gtggtggtggagtatccgtacgacatcacgccgttcatcacgctgtcgatcgaggaagtg
atcaagacgctgatcgagggcatcgtgctggtgttcctggtgatgtacctgttcctgcag
aacctgcgcgccacgctgatcccgaccatcgcggtgcccgtggtgctgctgggcaccttc
gcggtgatgtcggtggttggcttctcgatcaacaccctgtcaatgttcggcatggtgctg
gccatcggcctgctggtggacgatgcgatcgtggtggtggaaaacgtcgagcgggtcatg
gccgaggaaggcttgtcgccgcgcgacgccacgcgcaaggccatggagcagatcaccggc
gcgctggtgggcgtggcgctggtgctgtcggcagtgttcgtgccggtggcattctccggc
ggctcggtgggggcgatctaccggcagttttcgctgaccatcgttgccgccatggtgctg
tccgtactggtggccctgatcctgacgccagcgctgtgcgcgaccatgcttgagccgatc
ccgaaaggccaccacgatgaaaagaccggcttcttcggctggttcaaccgcaccttcgcc
aggagccagaaaaagtaccacggcggcgtggagcatgtgatccggcgctcggggcgctgg
ctgatcatctacctgatggtcattctggtagtgggcttgctgttcgtgcggctgccgaaa
gccttcctgcccgaagaggaccagggcaccatgtttgtgctggtgcaggcgcccgtgggt
tccacgcaggagcgcaccgccaaggtgctgctggatgtgcaggagtacctgctcaacagc
gagaaggaatccgtggaagcggtgctgacggttaacggcttcagctttgcaggccgcggc
cagaactcgggcctggtgttcgtgcggctcaaggacttctcccagcgggagtccgccaac
ctgaaagcacccgctttggtcaggcggattttcgggcactttgcgggatacaaggacgcc
aacgtgttcccgttgaaccccccttccattccggaactcggcacggccgcaggcttcgac
ttcgagttgcaggaccgtgccggcttgggccacgaaaagctgatgcaggcgcgcaacatg
ctgctcggcatggcggccaaggacgcgctgctggcacaggtgcgcccgaacggcctgaac
gacacgccgcagttcaaggtcgacatcgaccgcgaaaaggccaacgcgctgggcgtcagc
gccgccgacatcgaccagaccttctcgaccgcctgggcgtcgctatacgtgaacaacttc
ctcgataccgacaaccggatcaagaaagtctacgtgcagggcgaaccaaggttccgcatg
aacccggaggacctgaacgcctggtacgtgcgcaatgcggctggcacgatggtgccgttc
ggcgccttcggctcgggggcgtggatcttcgggtcccccaagctcgagcgcttcaacggc
atcccggcggtcgagatccagggctcggcggcggccggtaaatcgaccggccaggcgatg
aacgccatggaagccatcgcgcagaagctgcccgacggtatcggctacgaatggaccggc
ttgtcgtaccaggagcgccagtccggctcgcaggcgccactgctctatggcatctcgatc
ctcgtcgtcttcctttgcctggccgcgctgtatgagagctggtcgatcccgttctcggtg
atcatggtggtgccgctggggattctgggcgcgctgctggccgccaccctgcgcgggctg
gagaacgacgtcttcttccaggtcggcctgctgaccacggtggggctgtcggcgaagaac
gccatcctgatcgtggagttcgcccgcgacctgcgcgaccagggcatgagcaacgtcgac
gcggcggtggaggcggcacgcctgcgcttgcgcccgatcctgatgacatcgctggccttc
atccttggcgtgctgccgctggcgctcagcaatggcgctggctccggcagccagcatgcg
atcggcaccggcgtgatcggcgggatgctgaccgccaccttcctcgcgatcttcatgatc
ccgatgttcttcgtcgtgatcggcaagttcagcaagaccaggcacaagcccgggtcgcca
cctgcgcccgtcccgtccggccacgcgggcggcggcaatgacgatggcagcaatggcagc
aatggcagcgccggcacgcctggccaaggacattga
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