Candidatus Symbiobacter mobilis: Cenrod_2512
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Entry
Cenrod_2512 CDS
T02877
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
cbx
Candidatus Symbiobacter mobilis
Pathway
cbx00521
Streptomycin biosynthesis
cbx00523
Polyketide sugar unit biosynthesis
cbx00541
O-Antigen nucleotide sugar biosynthesis
cbx01100
Metabolic pathways
cbx01110
Biosynthesis of secondary metabolites
cbx01250
Biosynthesis of nucleotide sugars
Module
cbx_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
cbx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Cenrod_2512 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Cenrod_2512 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Cenrod_2512 (rfbC)
Enzymes [BR:
cbx01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
Cenrod_2512 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AGX88566
UniProt:
U5NAI3
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All DBs
Position
complement(2767149..2767745)
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AA seq
198 aa
AA seq
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MRFPIIPPLASPVAIMPYTVTPTTLPDVLILEPRVFEDPRGFFYESYNARDFLQATGIDC
VFVQDNHSRSQRGVLRGLHYQIEHPQGKLVRASHGEVYDIAVDLRRSSPHFGQWAGVVLS
AQNRRQLWIPPGFAHGFLVLSESAEFLYKTTDYWYPEHERILRWDDSRIGIPWPLDGAPI
LAAKDAAAPFLDQAETFV
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgcggttcccgataatcccgcccctcgcatcgcctgtcgccatcatgccgtacaccgtc
acacccaccaccctccctgacgtgctgattttggaaccccgggtctttgaagaccccaga
ggttttttttacgagagctacaacgcacgggactttctgcaggctaccgggatcgattgc
gtcttcgtgcaagacaaccatagccgctcgcaacgcggggtgttgcgcgggttgcattac
cagatcgaacacccccaaggcaagctggtgcgggcgagccacggcgaggtgtacgacatt
gccgtcgatctgcggcgatcatccccccacttcggccaatgggccggtgtcgtactgtct
gcgcaaaaccggcgccaattgtggataccgccgggcttcgcccatggctttctcgtcctc
agcgaaagcgcggagtttttgtacaagacgaccgactactggtaccccgaacacgagcgc
atcctgcgctgggacgattcccgcatcggcattccttggccgcttgatggcgcaccgatc
ttggctgccaaagatgccgccgcaccttttctggatcaggccgagacctttgtctga
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