Cutaneotrichosporon cavernicola: CcaHIS019_0107780
Help
Entry
CcaHIS019_0107780 CDS
T09540
Symbol
CcaverHIS019_0107780
Name
(RefSeq) uncharacterized protein
KO
K18721
nucleoporin NUP1
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CcaHIS019_0107780 (CcaverHIS019_0107780)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccac03019
]
CcaHIS019_0107780 (CcaverHIS019_0107780)
Messenger RNA biogenesis [BR:
ccac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CcaHIS019_0107780 (CcaverHIS019_0107780)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
85491931
NCBI-ProteinID:
XP_060453326
LinkDB
All DBs
Position
1:join(2096595..2099255,2099301..2100926)
Genome browser
AA seq
1428 aa
AA seq
DB search
MARNDSSTLSGAVRSPRRSRGLGLPYTREGNGNGALPSAYPQHGLRTSQSMSSLRRSGSN
SEGLLSGIKSMFSRPLAWLATPTRPQPRQGPQGTKRDHLSPDPEDPPSPSTRRATKRARR
GSDDKRKSPKHIGPYEPTTSTLPPLPATISLSRPRSSLASSASMPYLDPPKSLLGPSSPR
ASLRPRGSLSRSSRMELSADEFGLSAGTSATPDRRRTLSGAPEGWSPMRDKTPRASLAAP
PFAPASGSRGIARSQTLTNVRADASDVSMSSMRVGSGFGTFSGRSRLLPKSSTMRFDSVA
EDDDAMSTVSDRNDVFAERAARRAALTPVSSRLSVLPAHSKPAAEPKMIYVPGRGFVKAA
EASVPKPAPKNDADRILEALEASRHATSSLLPPQLVGASTRQLRKAIAVPLATSASTSER
KGHKAEWLSHGGGISSAISPYGRRRAIDMQAREQRRELRAAESDTDVSDMEVDGSALSVR
STGSLRRRSTRSRSMMSISESEGGGSDMSVSDARSPSPRRSGRRSTRNGKSPAAEEETPK
LRRSTRLRTIEETASPSKSAPLPRSKRAKSPVADATPRASRRRKATTPLSEISPEPAVAA
AVPIIKETAPSPIASSSYHVRDDSVPRERSSLRAGPTRNRQHQGAASYTSSRATSPGAGG
GGRFSAREEDLPDMDELEKLSKQSTANFSGFSMPSFPTFEKKAEAPKEPKENGQLSSRIA
VAPQQPATALSLPSSGLKPLGNRIGSTRPRASSPLASSSFIAEPDSPQTKEHVKEASKEP
QAPPAGGFFSFSGSAASTPGLTPPIAAGSTSDFFAPPKSPIKSSSLGLGKPSTPPSGGIP
NFFGGTTTPTAPPPKAPLFDFGNIKPAETIKAPEKPVEKHSSTAPFSFGKPRTPVTGTET
PQGPLSLAAPSAPSDKPDTTPNAFVFDVNKPADKPADAPKATFSFGAPPAPPADKPAEPA
KAPFSFGAPPAPAVDKPVEAPKPFSFGAPSAAPSDKPAEPTKAAFSFGTPSAASADKPVE
HAKAPFSFGAPAAPAADKPAESKAPFSFGSNSSTPAPTDKAAEAPKPFSFGAPSAPATAA
AANGDKPPFSFGAQSSAPTAGSGFGNTGTSGSTSFSFGGEKKADAPATSASTFSFGNNSA
PTPSSGFGALKTNGDAAKPFGFGNTTSTPAPSSGFNFGSNSTAASTGFGSNSNTSAPTGF
GAPVTSPTTTVSSTGFGVTSPTAGFGTGSGFGSASSSATNSANKPNFSFGSSSAAPATGG
FGSTPAAGTGFGSTPAPSTGFGAPAPASGGFNFGSNTANAASTSRPGSASAAPFGFGTTS
GASTPTGTSPGFQFGAPASAASSASAPFQFGASSTPTAPGFGASNTAPGSTFAFGAPAAG
GARFGSPAPGGQTGGATPDGFSMGVGAETPGSPGGRKIKPLRRGAVKR
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtaacgactccagcactctctcgggggctgtacgctcaccgcgccgctctcgt
ggcctcggattaccctatacccgtgagggcaacgggaacggcgcccttccctcggcgtac
cctcagcacgggctgcgcacgtcgcagtccatgtcgagcctgcgtcgctcaggctcgaac
tctgaaggcttactttcgggcatcaagagcatgttctcccgtccacttgcttggctcgcg
acgccgactaggccgcagcctcggcagggcccgcagggtaccaagcgcgaccacctctcg
cccgaccccgaggacccgccaagcccgtctacgcgccgcgcgaccaagcgcgctcgacgc
ggctcggatgacaagcgcaaatcgccgaagcatatcgggccgtatgagcccactacgtcc
acccttcccccgctccccgcgaccatctcgctgtcgcgcccacgctcctcgctcgcctct
tccgcaagcatgccctacctcgacccgcccaagtcgctgctcggtccatcgtcgccgcgc
gcgagtctgcgtccgcgtggctcgctctcgcgttcctcgagaatggaattgagcgcggac
gagtttgggttgtcggctggcaccagtgcgacacccgaccgtcgtcgcacgctcagcgga
gcccccgagggctggagccctatgcgggataagaccccgcgcgcgtcgctggctgcaccc
ccgttcgcgccggcctctggctcgcgtggcatcgcgcgtagccagactctcaccaacgtc
cgtgcggacgcgtcggacgttagcatgtccagtatgcgtgtgggcagtgggttcgggacg
tttagcgggcggtcgcgcctcttacccaagagctcgactatgcggttcgactccgtggcc
gaggatgacgacgccatgagcactgtatcggaccggaacgacgtgtttgctgagcgtgcg
gcgcgccgcgccgccctcacgcccgtctcgtcccgcctctccgtgctccctgcgcattcg
aagcctgcggcggagcccaagatgatctacgttcccggtcgcgggtttgtcaaggccgcc
gaggcgtcggtgcccaagcccgctccgaagaacgacgctgatcgcatcctcgaggccctc
gaggcgtcccgccacgcgacctcttctcttcttccgccccagttggtcggcgcgtctacc
cgccagctgcgcaaggctatagccgtaccgctcgcgacgtcagcatcgacgtccgagcgt
aagggccacaaggccgagtggctcagccacggtggcggcatctcgtcggctatctcgcca
tacggccgccgccgcgcgatagacatgcaggcacgcgagcagcgccgcgagctccgcgcc
gccgaatcggatacggacgtgtcggacatggaggtcgatgggtctgcgctctctgtgcgt
tcgacgggaagcttgcgccgacgcagcacgcgctcgcgctccatgatgagcatctcggag
agcgagggaggcggctcggacatgagcgtgtcggacgcgcgctcaccttctccccgcagg
agcgggcgccgctcgacgcgaaacggcaagagcccggcagccgaggaggagacacccaag
ctgcgcaggagtacccgcctccgtacaattgaggagaccgcgtcgccgtcgaagtccgcg
ccactgcctcggagtaagcgtgccaagagccccgtggcggacgccacgcctcgcgcaagc
cgccggaggaaggcaaccactcctctttccgagatctcgcccgagccggccgtcgcggct
gctgtcccaatcatcaaggagactgccccttcgcctattgcttcctcgagctaccatgtc
cgcgacgactctgtgccgcgcgagcgctccagcctccgtgctgggcccacgcgcaatcgg
cagcaccagggggcggcaagctacacctcgtcgcgtgcgaccagccctggcgcaggcggc
ggtgggcgcttctccgcgcgcgaggaggacctgcctgacatggatgagctggagaagttg
tcaaagcaatcgacggccaatttctcgggcttctcgatgccgagcttcccgacgtttgag
aagaaggccgaggcacccaaggagccgaaagagaacgggcagttgtccagccgcatcgcc
gtcgcaccacagcagccggcgactgccctaagccttcctagctcgggtctcaagcctctg
ggtaaccggatcggctcgactcggccgagggcgagctctcctctcgcctccagctcgttc
attgctgagcccgactcgccgcagaccaaggagcatgtgaaagaggcgtcaaaggagcct
caggctccgcctgccggcggcttcttctcgttctcgggctctgctgcgtccacgcctggc
ctcacgccacccattgccgccggttctacctctgacttcttcgcgccacctaagagcccc
attaagtcttccagcctcggcctcggcaagccgtcaacccctccctctggtggtatccct
aactttttcggcggtacgaccacgcccaccgcgcctccgcccaaggcgcctttgttcgac
tttggcaacatcaagcctgcagagactatcaaggccccggaaaagccagtcgagaagcat
tccagcactgcgcccttctcgtttggtaagcctaggactcctgtgactggcacggagaca
ccccaggggccgttgtccttggcagccccgtccgctccctcggacaaacccgataccacg
cccaacgcgttcgtctttgacgttaacaagcctgccgacaagcccgcggacgcccccaag
gctacatttagctttggtgcgccgcctgctccgcctgcggacaagccagctgaacccgct
aaggctcccttctcgtttggtgcacctcctgctcctgctgtggacaagccggttgaggct
cccaagccatttagtttcggcgccccgtccgctgctccttctgacaagccggctgagcct
accaaggctgccttcagcttcggcacaccttctgctgcttctgcggacaagcctgtcgag
catgctaaagctccgttctcgttcggtgcgccggcggctcctgctgcggacaagcctgcc
gagagcaaggctcccttctccttcggctcgaacagctcgacgccggcgcccaccgacaag
gcggcagaggcccctaagccgttctctttcggcgctccttccgcacctgccactgcagcc
gcagccaacggcgacaagccgccattctcctttggcgctcagtcttcggcgcctaccgct
ggctctggcttcggcaacaccggcacgtctgggagcaccagcttctccttcggcggcgag
aagaaggccgacgcacccgccacgtcagcctccaccttctcgttcggcaacaactccgca
cccactccgagctccggcttcggtgccctcaagacgaacggcgacgcggctaagcccttc
ggtttcgggaacacgacgagcacaccagccccgtcgtctggattcaactttggctccaac
tcaaccgctgcgtctactggcttcggctccaactcgaacacgtctgctcctaccggcttt
ggtgcgcccgtgacctcaccgacaacgacggtgagcagcactggctttggcgtgacttcg
cccacggctggcttcggtaccggctctggcttcggctccgcgtcgagctcagccaccaac
tcggccaacaagccaaacttctccttcgggagctcgtctgcggcgcccgctacgggtggg
ttcggcagcacgccagctgctggtactggcttcggctcgaccccagccccttccaccggc
tttggcgctcctgcccctgcttctggtggcttcaactttggctccaacacggccaacgcg
gccagcacctccagaccaggctccgcttcggccgcgcccttcggcttcggcacaacgtcg
ggcgcatccacgccgaccggcacgtctccaggcttccagttcggtgcgcctgcgagcgca
gccagctcagcaagcgcacccttccagttcggcgcgagctccacgccaaccgcacctggc
tttggcgcgtccaacactgcgcctggctcgacgtttgcctttggagcacccgcggcaggc
ggtgcccgcttcggctcacccgcaccaggggggcaaacagggggagcaaccccagacggc
ttcagcatgggcgttggggctgagacgcccggctcgcctggcggcaggaaaatcaagccc
ctccgccgaggtgcagtgaagcgctag
DBGET
integrated database retrieval system