KEGG   Cutaneotrichosporon cavernicola: CcaHIS019_0201890
Entry
CcaHIS019_0201890 CDS       T09540                                 
Symbol
cdc17, CcaverHIS019_0201890
Name
(RefSeq) uncharacterized protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
ccac  Cutaneotrichosporon cavernicola
Pathway
ccac03030  DNA replication
ccac03410  Base excision repair
ccac03420  Nucleotide excision repair
ccac03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ccac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CcaHIS019_0201890 (cdc17)
   03410 Base excision repair
    CcaHIS019_0201890 (cdc17)
   03420 Nucleotide excision repair
    CcaHIS019_0201890 (cdc17)
   03430 Mismatch repair
    CcaHIS019_0201890 (cdc17)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccac03032]
    CcaHIS019_0201890 (cdc17)
   03400 DNA repair and recombination proteins [BR:ccac03400]
    CcaHIS019_0201890 (cdc17)
Enzymes [BR:ccac01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CcaHIS019_0201890 (cdc17)
    6.5.1.6  DNA ligase (ATP or NAD+)
     CcaHIS019_0201890 (cdc17)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     CcaHIS019_0201890 (cdc17)
DNA replication proteins [BR:ccac03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    CcaHIS019_0201890 (cdc17)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     CcaHIS019_0201890 (cdc17)
DNA repair and recombination proteins [BR:ccac03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     CcaHIS019_0201890 (cdc17)
   NER (nucleotide excision repair)
    Other NER factors
     CcaHIS019_0201890 (cdc17)
   MMR (mismatch excision repair)
    Other MMR factors
     CcaHIS019_0201890 (cdc17)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C eIF-3c_N
Other DBs
NCBI-GeneID: 85492698
NCBI-ProteinID: XP_060454093
LinkDB
Position
2:join(474754..474760,474796..474900,474936..475287,475325..475390,475424..475589,475628..475768,475806..475907,475943..476105,476146..476221,476257..476342,476377..476771,476808..477038,477074..477421,477458..477547,477588..477662)
AA seq 800 aa
MSGVDSPVRAPVRKVKRVIESDEEGSPSPVKARNGADTMSPPAKKAKLDMGFFQPKKASQ
KSPSPKKSASPTREVKTEGKDVKKTEIKKGANKEKGPEKKPAANGKPLASIFAKPVKKEE
PEDEDKAFINDDEEGEDEISDEELEEQEGKAAVKLAAMFTKDFKSNVADKGWKEGEPVPY
AALVATFEQIEATTKRLEILNILTQFLRVVAERDTDPEASNLLKTVYLCINRLCPDYEGL
ELGIGETILMKAIAESTGRNVKQIKEDLKKEGDLGKVAMASRNKQKTLFKPKPLTVTSVF
QRLTAIAKTSGNQSQAKKVGLINQLLSACQGNEAKFIIRSLEGKLRIGLAERSLPTALGH
AIVLKNNEGKKLSPEVMSKKLEEASVIVKAVYSELPNYDIIVPALMKGGIHHLRENCKLT
PGVPLKPMLAKPTKAITEVLDRFDGKQFTCEYKYDGERAQVHLLEDGTIAVFSRNSEDMS
AKYPDMVDQIPRCIKEGVKSFVLDAEAVAYDPQEQKLLPFQELSRRKRKDVKTEDITVRV
HLFAFDLLYLNGESLLQKELRERREILNAHFQPVESEFGFAKASDSSSTEDISAFLEESI
KDGCEGLMVKLLTTDASTYEPSRRSMNWLKLKKDYLEGVGDSLDLVVVGAYYGKGKRTNW
YGAYLLACYDPDSENFQTICKIGTGFSEEQLKAQYEELHPLEMAKPRGDIEVGGAKPDVW
FEPKVVWEVLTADLSLSPVYTAAHGLIESRGISLRFPRFLRARDDKDADDATTAEQVAEF
YQRQATAGNKKGGGSAEDYW
NT seq 2403 nt   +upstreamnt  +downstreamnt
atgtcgggcgtcgacagtcccgttagagcgcccgtgcgcaaggtcaagcgcgtcatcgag
tcggacgaggagggctcgccgtctcccgtgaaggcgaggaacggggctgataccatgtcg
ccgccagcgaagaaagccaagctagacatgggcttctttcagcccaagaaggcgtcgcag
aagtcgccatcgccgaagaagtcggcttcgccgacgagggaggtgaagaccgaggggaag
gacgtgaagaagaccgagatcaagaagggggccaacaaggagaaggggccagagaagaaa
cctgcagcaaacggcaagccactagcgtccatcttcgccaagcctgtcaagaaggaagag
ccggaggatgaggacaaggccttcattaacgatgacgaggaaggtgaggacgagatcagc
gacgaggagctcgaggaacaggaggggaaggctgcggtcaagctcgctgccatgttcacc
aaggacttcaaatccaacgttgccgacaaggggtggaaggaaggcgagccggtgccgtac
gccgcgttagtagcgactttcgagcagatagaggcaacgacgaagcgtctcgagatctta
aacattctcacccagttcctacgtgtcgtcgcagagcgtgacaccgaccccgaggcctcc
aacctcctcaaaacagtgtacctttgcataaacaggttatgccccgattacgagggtctg
gagctcggaatcggcgagacgatcctcatgaaagctatcgcggagagtacgggccgcaac
gtcaagcagatcaaggaggacctcaagaaggagggcgatctgggcaaagttgcgatggca
tcgcgcaacaagcagaagacgctgttcaagcccaaaccgctaactgttacctctgttttc
cagcgcttaacagccattgccaagacatcgggtaaccagtcacaagccaagaaggttggc
ctcatcaaccagctcctctcggcgtgtcagggcaacgaggccaagttcatcattcgtagt
ctggagggcaagctgcgtatcggtcttgccgagcggtcacttcccaccgcgcttggacac
gcgattgttctcaagaacaacgagggcaagaaactgtcgccagaagtcatgtcgaagaaa
ttggaagaggctagcgtgattgtgaaggcagtgtacagtgaactccccaactacgatatc
atcgttcccgctctgatgaagggtggtatccaccacttgagggaaaactgcaagctcaca
cctggtgtgccgctgaagcccatgctggccaagcctaccaaggccatcacagaggtgctc
gaccgcttcgatggcaagcaattcacgtgcgagtacaagtatgatggcgagcgagcacaa
gtgcacctccttgaggacggcaccatcgccgtgttcagtcgcaactcggaggacatgagc
gccaagtacccggacatggttgaccagatcccacgctgcatcaaggagggcgtgaagtcg
tttgttctcgacgccgaggccgtggcgtacgatccgcaagaacagaaactgctgcccttc
caggagctcagccgacgcaaacgcaaggacgtgaagacggaagacattaccgtccgcgtc
cacttgtttgcattcgatcttctgtatttgaacggcgagagcttgttgcagaaggagctg
cgcgagcgacgtgagattctgaacgcacacttccagcccgtcgagagcgagttcgggttc
gccaaggcctccgacagctcgagcacggaggacatctcggcattcctcgaagagagtatc
aaggacggatgtgaaggcctcatggtcaagctgctaactaccgacgcgtcaacatacgag
cccagccgccgcagcatgaactggttgaagctcaagaaggactacctcgagggcgtcggc
gattcgctcgacctggtggtcgtcggcgcatactacggcaagggcaagcggacaaactgg
tacggcgcctacttgctcgcatgttacgacccagactcggagaacttccagacaatctgc
aagatcggcaccggcttctccgaggagcagctcaaggctcaatacgaggagctgcaccca
ctcgagatggccaagccgcgaggcgacatcgaggtcggcggggccaagcccgacgtgtgg
ttcgagcccaaggtcgtctgggaggtgctcaccgccgacctctcgctctcgcccgtctac
actgctgcccatggattgatcgagagccgtggcatctcgctgcgtttcccacgcttccta
cgcgcccgcgacgacaaggacgccgacgacgcgacgactgcagagcaggtggccgaattt
taccagcgtcaggcgacggcggggaacaagaagggaggtgggagtgcagaggattactgg
tga

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