Entry |
|
Symbol |
cdc17, CcaverHIS019_0201890
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Name |
(RefSeq) uncharacterized protein
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KO |
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Organism |
ccac Cutaneotrichosporon cavernicola
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:ccac00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CcaHIS019_0201890 (cdc17)
03410 Base excision repair
CcaHIS019_0201890 (cdc17)
03420 Nucleotide excision repair
CcaHIS019_0201890 (cdc17)
03430 Mismatch repair
CcaHIS019_0201890 (cdc17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:ccac03032]
CcaHIS019_0201890 (cdc17)
03400 DNA repair and recombination proteins [BR:ccac03400]
CcaHIS019_0201890 (cdc17)
Enzymes [BR:ccac01000]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
CcaHIS019_0201890 (cdc17)
6.5.1.6 DNA ligase (ATP or NAD+)
CcaHIS019_0201890 (cdc17)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
CcaHIS019_0201890 (cdc17)
DNA replication proteins [BR:ccac03032]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
CcaHIS019_0201890 (cdc17)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
CcaHIS019_0201890 (cdc17)
DNA repair and recombination proteins [BR:ccac03400]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
CcaHIS019_0201890 (cdc17)
NER (nucleotide excision repair)
Other NER factors
CcaHIS019_0201890 (cdc17)
MMR (mismatch excision repair)
Other MMR factors
CcaHIS019_0201890 (cdc17)
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
2:join(474754..474760,474796..474900,474936..475287,475325..475390,475424..475589,475628..475768,475806..475907,475943..476105,476146..476221,476257..476342,476377..476771,476808..477038,477074..477421,477458..477547,477588..477662)
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AA seq |
800 aa
MSGVDSPVRAPVRKVKRVIESDEEGSPSPVKARNGADTMSPPAKKAKLDMGFFQPKKASQ
KSPSPKKSASPTREVKTEGKDVKKTEIKKGANKEKGPEKKPAANGKPLASIFAKPVKKEE
PEDEDKAFINDDEEGEDEISDEELEEQEGKAAVKLAAMFTKDFKSNVADKGWKEGEPVPY
AALVATFEQIEATTKRLEILNILTQFLRVVAERDTDPEASNLLKTVYLCINRLCPDYEGL
ELGIGETILMKAIAESTGRNVKQIKEDLKKEGDLGKVAMASRNKQKTLFKPKPLTVTSVF
QRLTAIAKTSGNQSQAKKVGLINQLLSACQGNEAKFIIRSLEGKLRIGLAERSLPTALGH
AIVLKNNEGKKLSPEVMSKKLEEASVIVKAVYSELPNYDIIVPALMKGGIHHLRENCKLT
PGVPLKPMLAKPTKAITEVLDRFDGKQFTCEYKYDGERAQVHLLEDGTIAVFSRNSEDMS
AKYPDMVDQIPRCIKEGVKSFVLDAEAVAYDPQEQKLLPFQELSRRKRKDVKTEDITVRV
HLFAFDLLYLNGESLLQKELRERREILNAHFQPVESEFGFAKASDSSSTEDISAFLEESI
KDGCEGLMVKLLTTDASTYEPSRRSMNWLKLKKDYLEGVGDSLDLVVVGAYYGKGKRTNW
YGAYLLACYDPDSENFQTICKIGTGFSEEQLKAQYEELHPLEMAKPRGDIEVGGAKPDVW
FEPKVVWEVLTADLSLSPVYTAAHGLIESRGISLRFPRFLRARDDKDADDATTAEQVAEF
YQRQATAGNKKGGGSAEDYW |
NT seq |
2403 nt +upstreamnt +downstreamnt
atgtcgggcgtcgacagtcccgttagagcgcccgtgcgcaaggtcaagcgcgtcatcgag
tcggacgaggagggctcgccgtctcccgtgaaggcgaggaacggggctgataccatgtcg
ccgccagcgaagaaagccaagctagacatgggcttctttcagcccaagaaggcgtcgcag
aagtcgccatcgccgaagaagtcggcttcgccgacgagggaggtgaagaccgaggggaag
gacgtgaagaagaccgagatcaagaagggggccaacaaggagaaggggccagagaagaaa
cctgcagcaaacggcaagccactagcgtccatcttcgccaagcctgtcaagaaggaagag
ccggaggatgaggacaaggccttcattaacgatgacgaggaaggtgaggacgagatcagc
gacgaggagctcgaggaacaggaggggaaggctgcggtcaagctcgctgccatgttcacc
aaggacttcaaatccaacgttgccgacaaggggtggaaggaaggcgagccggtgccgtac
gccgcgttagtagcgactttcgagcagatagaggcaacgacgaagcgtctcgagatctta
aacattctcacccagttcctacgtgtcgtcgcagagcgtgacaccgaccccgaggcctcc
aacctcctcaaaacagtgtacctttgcataaacaggttatgccccgattacgagggtctg
gagctcggaatcggcgagacgatcctcatgaaagctatcgcggagagtacgggccgcaac
gtcaagcagatcaaggaggacctcaagaaggagggcgatctgggcaaagttgcgatggca
tcgcgcaacaagcagaagacgctgttcaagcccaaaccgctaactgttacctctgttttc
cagcgcttaacagccattgccaagacatcgggtaaccagtcacaagccaagaaggttggc
ctcatcaaccagctcctctcggcgtgtcagggcaacgaggccaagttcatcattcgtagt
ctggagggcaagctgcgtatcggtcttgccgagcggtcacttcccaccgcgcttggacac
gcgattgttctcaagaacaacgagggcaagaaactgtcgccagaagtcatgtcgaagaaa
ttggaagaggctagcgtgattgtgaaggcagtgtacagtgaactccccaactacgatatc
atcgttcccgctctgatgaagggtggtatccaccacttgagggaaaactgcaagctcaca
cctggtgtgccgctgaagcccatgctggccaagcctaccaaggccatcacagaggtgctc
gaccgcttcgatggcaagcaattcacgtgcgagtacaagtatgatggcgagcgagcacaa
gtgcacctccttgaggacggcaccatcgccgtgttcagtcgcaactcggaggacatgagc
gccaagtacccggacatggttgaccagatcccacgctgcatcaaggagggcgtgaagtcg
tttgttctcgacgccgaggccgtggcgtacgatccgcaagaacagaaactgctgcccttc
caggagctcagccgacgcaaacgcaaggacgtgaagacggaagacattaccgtccgcgtc
cacttgtttgcattcgatcttctgtatttgaacggcgagagcttgttgcagaaggagctg
cgcgagcgacgtgagattctgaacgcacacttccagcccgtcgagagcgagttcgggttc
gccaaggcctccgacagctcgagcacggaggacatctcggcattcctcgaagagagtatc
aaggacggatgtgaaggcctcatggtcaagctgctaactaccgacgcgtcaacatacgag
cccagccgccgcagcatgaactggttgaagctcaagaaggactacctcgagggcgtcggc
gattcgctcgacctggtggtcgtcggcgcatactacggcaagggcaagcggacaaactgg
tacggcgcctacttgctcgcatgttacgacccagactcggagaacttccagacaatctgc
aagatcggcaccggcttctccgaggagcagctcaaggctcaatacgaggagctgcaccca
ctcgagatggccaagccgcgaggcgacatcgaggtcggcggggccaagcccgacgtgtgg
ttcgagcccaaggtcgtctgggaggtgctcaccgccgacctctcgctctcgcccgtctac
actgctgcccatggattgatcgagagccgtggcatctcgctgcgtttcccacgcttccta
cgcgcccgcgacgacaaggacgccgacgacgcgacgactgcagagcaggtggccgaattt
taccagcgtcaggcgacggcggggaacaagaagggaggtgggagtgcagaggattactgg
tga |