Cutaneotrichosporon cavernicola: CcaHIS019_0409080
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Entry
CcaHIS019_0409080 CDS
T09540
Symbol
CLF1, CcaverHIS019_0409080
Name
(RefSeq) uncharacterized protein
KO
K12869
crooked neck
Organism
ccac
Cutaneotrichosporon cavernicola
Pathway
ccac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CcaHIS019_0409080 (CLF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccac03041
]
CcaHIS019_0409080 (CLF1)
03036 Chromosome and associated proteins [BR:
ccac03036
]
CcaHIS019_0409080 (CLF1)
Spliceosome [BR:
ccac03041
]
Complex B
Other components
Prp19-related factors
CcaHIS019_0409080 (CLF1)
Complex C
CcaHIS019_0409080 (CLF1)
Chromosome and associated proteins [BR:
ccac03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
CcaHIS019_0409080 (CLF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
HAT
TPR_19
TPR_2
Suf
TPR_16
SNAP
Mad3_BUB1_I
FAT
TPR-S
DUF5937
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
85495958
NCBI-ProteinID:
XP_060457353
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All DBs
Position
4:complement(join(2348407..2349731,2349767..2350634))
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AA seq
730 aa
AA seq
DB search
MSGRDRDPRNREPRVKNRAPATVQITAEQILREAHDRQELPVQAPKQRIQDLEELHEFQG
RKRNEFEGRIRYSPDAIRAWIKYATWEASQNEFERSRSVFERALDVDPRHTELWIKYCDM
ELRARNINHARNLFDRAVTLLPRVDSIWYKYVYLEELLLNIAGARQIFERWLQWEPQDKA
WQSYIKLEERYNELDRASDIYERWIGTRPTPKNWCLWAKFEEERGASDKARKVFQTALEF
FGDEEEQIEKAQQVFAAFARMETRLKEYERARVIYKFALARLPRSKSANLYSSYTKFEKQ
HGDRSGVELTVLGKRRIQYEEELAYDSTNYDAWFSLARLEEDAYRAEKEDGEDADPGRVR
EVYERAVANVPPASEKRYWRRYIYLWLQYAAFEEIDTQDYDRARDVYKAAIRLVPHKVFT
FAKLWLAYAYFEIRRVDVNAARKVLGASIGMCPKPKLFAGYIELEMRLREFDRVRKLYEK
FLAYDASLSSAWIQWTQMEALLEDLERVRAIYELAVQQDLDMPELVWKAYIDFEIEEGER
ERARHLYERLLERTGHYKVFISYALLEASALGGGEDEDGNELDAVPGDDGRARAIFERGY
KDLRARGVKEDRALLLEAWESFEEENGSDDDRAEVAKLKPQTRRRWRPRGDGSGEYDEYW
DIVFPDDEKEENPAAFAIFQAAKEWAANKEGGAGGLNYEMDSDSDSDSDSDGEEGEGGSG
EGQAEEMDED
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtccggacgggaccgcgatccgcgcaaccgcgagccaagggtcaagaaccgcgcgccc
gccacggtccaaatcacggcggagcagattctgcgcgaggctcatgaccgccaggaattg
cctgtccaggcgcccaagcagcgcatccaagaccttgaggaactgcacgagttccagggc
cgcaagcgtaacgagtttgaaggacgtattcgatactcgccagacgctattcgtgcgtgg
atcaagtacgcgacatgggaggctagccagaacgagtttgagcggtcgcgctctgtgttt
gagcgtgcgctcgacgtcgatccacgccataccgagctgtggatcaagtactgcgacatg
gagctgcgggcgcgtaatatcaatcacgcacgcaatttgttcgaccgtgccgttacgcta
ctcccccgcgtcgattcgatctggtacaagtacgtgtacctcgaggaactgctcctcaac
attgcgggagcgcggcagatctttgagcgctggctccaatgggaaccacaggacaaggca
tggcagagctacatcaaactcgaggagcggtataatgagctcgaccgagccagcgacatc
tacgagcgctggattggcacacggccgactcccaagaactggtgcctgtgggccaagttt
gaggaggagcgcggcgcgtcggacaaggcgcgcaaggtgttccaaacggcactcgagttc
tttggcgacgaggaggagcagatcgagaaggcgcaacaagtgtttgccgcgttcgcacgc
atggagacgcggttgaaggagtatgagcgcgcgcgagtgatctacaagtttgcgctagcg
cggctgcctaggtcgaagagtgccaacttgtactcgagctacaccaagttcgagaagcag
cacggcgaccggtctggcgttgagctcacagtcctcggtaaacgacgaatccagtacgag
gaggagctcgcgtacgactcgaccaactacgacgcatggttctcgctcgcaagactcgag
gaggacgcgtaccgcgccgagaaggaggacggggaagacgctgacccagggcgagtgcgt
gaggtgtacgagcgcgcagtcgccaacgtcccaccagcgagcgagaagcgatactggcgg
cgatacatctacttgtggctgcagtacgcggcgtttgaagagatcgacacgcaggattat
gaccgcgcgcgcgatgtctacaaggcggcgatccggttggtcccacacaaggtgttcacg
ttcgccaagttgtggctcgcatacgcgtactttgagatccggcgagtcgacgtcaacgcg
gcgcgcaaagtactcggcgcgtcgattggtatgtgccccaagcccaagctctttgcggga
tacatcgagcttgagatgcggttgcgcgagttcgaccgcgtgcgcaagctgtacgaaaaa
ttcttggcgtacgacgcgtcgttatcgtcggcctggatccagtggacacagatggaggcg
ctgcttgaggacctggagcgtgtgcgcgccatttacgagctggcggtccagcaggacctc
gacatgcccgagctcgtgtggaaggcgtacatcgacttcgagattgaggagggtgagcgc
gaacgcgcgcgccacctctacgagcgcctgctcgagcgcacgggacactacaaggtgttc
atctcgtacgcgctcttggaggcgagtgcgttgggcggcggcgaggacgaggacggcaac
gagctcgatgcggtacctggcgacgatgggcgtgcgagggccatcttcgagcgcgggtac
aaggacctgcgtgcgcgtggggtgaaggaggaccgcgcgctcctcctcgaagcatgggag
agctttgaggaggagaatgggagtgatgacgaccgcgccgaggtcgcaaaactcaagccg
cagacgcgtcggcggtggcggccacgcggggacggcagcggcgaatacgacgagtattgg
gacatcgtgtttcccgacgacgagaaggaggagaatcccgccgcgtttgccatcttccaa
gctgccaaggaatgggccgcgaacaaggagggcggcgcgggtggtctcaactacgagatg
gactcggactcggactcggactcggacagcgacggagaagaaggggagggtgggtcaggg
gaggggcaggccgaggagatggacgaggactag
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integrated database retrieval system
