Cervus canadensis (wapiti): 122424502
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Entry
122424502 CDS
T07554
Symbol
SCN10A
Name
(RefSeq) sodium channel protein type 10 subunit alpha
KO
K04842
voltage-gated sodium channel type X alpha
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccad04040
]
122424502 (SCN10A)
Ion channels [BR:
ccad04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
122424502 (SCN10A)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
CcmD_alt
Na_trans_cytopl
GPHH
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
122424502
NCBI-ProteinID:
XP_043298302
LinkDB
All DBs
Position
22:47083149..47170998
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AA seq
1979 aa
AA seq
DB search
MEFPFGSLETPNFRRFTPESLVEIEKRIAAEQEAKKAKEKFRKQKDQKDKPRPQLDLKAC
NQLPKFYGTLPAELIGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALWLFSPFNLIR
RTAIKVSIHSWFSLFITITILVNCVGMTQTELPERMEYVFTVIYTFEALIKILARGFCLN
EFAYLRDPWNWLDFSVITLAYAGEVTDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALI
HSVKKLADVTILTVFCLSVFALVGLQLFKGNLKNKCVKNCTAVNETANYSSHEKREWNYC
HGDQDYYTNKEGTSDPLLCGNGSDAGHCPEGYFCLKTSDNPDFNYTSFDSFAWAFLSLFR
LMTQDSWERLYQQTLRASGKIYMIFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATIDEI
EAKEKKYQETLEILRAEQEVLAALGVDTASLQSHNGSPLASKTASERKHRMKSRVSEGST
DDNKSLRSESYNQHRMSFLGLTAGRRRASHGSVFHFQAPGRDISFPDGVTDDGVFPGDHE
SHHGSLLMLRGTGQQGPLPRSPLPQTLNRGSGRGEDGAPKMTTGELAPGVIEVPAFDAGQ
KTFLTADYLNEPFRVQRAMSVVSIMTSVLEELEESKQRCPPCLTSLAQKYLIWDCCPTWV
KLKTLLFTIVMDPFAELTITLCIVVNTVFMAMEHYGMSPAFEAMLQIGNIVFTVFFTAEM
VFKIIALDPYYYFQKKWNIFDCIIVTVSLIELGAARKGSLTVLRTFRLLRVFKLAKSWPT
LNTLIKIIGNSVGALGNLTIILAIIVFVFALVGKQLLGENYCQKRKKISAPNEDWPRWHM
YDFFHSFLIVFRILCGEWIENMWACMEVGQKSICLILFLTVMVLGNLVVLNLFIALLLNS
FSADNLTPPEDDGEVNNLQVALARIQVFGQHTKRALCSFLSRPCLLPWPKAEPQLVVKLP
LSTSIAKNHIAADTALGSPGRLPALRSPRDDHSDFITDPNIWVSVPIAEGESDLDDLEEN
GEEDAQSTGQEAIPQRQEQLQQVGKYEDHLPRRSPGSGISSEDLTPYLGEKWKDEPPAQS
PAKGADDTSSSEGSTVDFLDPEEILRKIPELADDLDEPDDCFTEGCVHHCPCCRVNSSRF
PWATGWQVRKACFRIVEHSWFESFIVFMILLSSGALAFEDFYLDQKPTVKALLEYTDRVF
TFIFVFEMLLKWVAYGFKNYFTNAWCWLDFLIVNISLTSLIAKILQYSDMASIKALRTLR
ALRPLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFQKCINK
TNEGFLLVPWSTVNNMSDCERQNHTGSLFWVNVKVNFDNVAMGYLALLQVATFKGWMDIM
YAAVDSRDVNFQPKWEDNVYMYFYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQDI
FMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQTFDIVIMVLICLNMITM
MVETDEQSEEKTKVLNKINQFFVAVFTGECVMKMFALRHYYFTNGWNVFDFVVVVLSIGS
LVFSAIVTSLGSLFSPTLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIGLL
LFLVMFIYSIFGMASFASVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNT
GPPYCDPNLIINNSTRGDCGNPIVGIIFFTTYIIISFLIVVNMYIAVILENFNVATEEST
EPLSEDDFDMFYETWEKFDPEATQFITFSALSDFADALSGPLRIPKPNRNVLIQMDLPLV
PGDKIHCLDILFAFTKNVLGESGELDSLKANMEEKFMATNLSKASYEPIATTLRWKQEDI
SATVIQKAYRSYMRHRSRTIASPAGVPRAEEEAASLSNERFAALIANENCVLPDKSETAS
TTSFPPSYDSVTRGLSDQVNLSTSSSMQNEGEAVSKEATGPSCGPSSMGMSSSDVSAAP
NT seq
5940 nt
NT seq
+upstream
nt +downstream
nt
atggaattcccctttgggtccctggaaactcccaacttccgtcgattcaccccggagtcc
ctggtggagattgaaaaaagaattgctgctgagcaagaggcaaagaaagccaaagagaag
ttcaggaagcagaaggaccagaaagacaagcctcggccccagctagacttgaaagcctgc
aaccagttgcccaagttctatggtacactcccggcagagctgattggggagccgctggag
gatctggaccccttctacagcacacaccggacatttatggtgctgaacaaagggaggacc
atttcccggtttagtgccactcgggccctgtggttattcagtcctttcaacctgatcaga
agaacagccatcaaagtgtccatccactcgtggttcagtttatttataaccatcactatt
ttggtcaactgtgtgggcatgacccaaacagaacttccagagagaatggaatatgtcttc
actgtcatttatacctttgaagccttgataaagatattggcaagaggattttgtctaaat
gagttcgcttacctgagagatccttggaactggctggattttagtgtcatcactctggcc
tatgctggtgaagtgacagatctccgagggatctcaggcctgcgcacgttcagagtcctt
agagctttaaaaaccgtgtctgtgatcccgggactgaaggtcatcgtgggggccctgatc
cactcggtgaagaagctggctgacgtgaccattctcactgtcttctgcctgagtgtcttt
gccctggtgggcctgcagctcttcaagggcaacctcaagaacaaatgcgtcaagaattgc
acagctgtcaacgagacagccaattactcctctcacgaaaaacgggagtggaattactgc
catggggaccaagattactataccaacaaagaaggcacttctgaccccttactctgtggc
aatggatctgatgcaggccactgccctgaaggttatttctgccttaagacatctgacaac
ccagattttaactataccagctttgattccttcgcttgggcttttctctcactgtttcgc
ctcatgacacaggattcctgggaacgcctctaccagcagaccctgagggcttctggaaaa
atctatatgatttttttcgtgcttgttatcttcctggggtctttctacctggtcaatttg
atcttggctgtggtcaccatggcatatgaggagcagaaccaggcaaccattgatgaaatt
gaagccaaggagaagaagtaccaggagacccttgagatactccgggcagagcaggaggtt
ctggcagcactgggggttgacacagcctctctccagtctcacaatggatcccccttggcc
tccaaaactgccagtgaaagaaaacacagaatgaagtcaagggtgtcagagggctccaca
gacgacaataagtcactccggtctgagtcttacaaccagcaccgaatgtctttcctaggc
ctcactgctgggagacgccgggctagccatggcagtgtgttccatttccaggcccctggc
cgagacatctcattccctgatggggtcacagatgatggagtctttcctggagaccatgaa
agccatcatggctccctgctgatgcttaggggtacaggccagcaaggccccctccctagg
agtccactgcctcaaaccctcaaccgtggctcagggcgtggagaagatggagctcccaaa
atgaccactggagagcttgcccctggagtcatcgaagtcccggcgtttgatgcaggtcag
aagactttcctaacagcagactacttgaatgaacctttccgagtccaaagggcaatgagt
gttgtcagtatcatgacctctgtcctcgaggaacttgaggagtctaaacagaggtgccca
ccctgcttgaccagcttggctcagaagtatcttatctgggattgctgccccacatgggtg
aagctcaagacgcttctcttcacaattgtgatggacccctttgcagagctcaccatcacc
ctgtgcatcgtggtgaacaccgtcttcatggccatggagcactatggcatgagccccgcc
ttcgaagccatgctccagatcggcaacattgtatttactgtgtttttcactgctgaaatg
gtcttcaaaatcatagccttggacccctactattacttccagaagaagtggaacatattt
gactgcatcatcgtcaccgtgagcctgatagagctgggcgcagcccggaaggggagcctg
acagtgctgcggaccttccgcctgctgcgggtcttcaagctggccaagtcctggccaacc
ttaaacacgctcatcaaaatcatcggcaactcggtcggggccctggggaacctgaccatc
atcctggccatcattgtcttcgtctttgctctggttggcaagcagctcctgggggaaaac
tactgccaaaagcggaaaaaaatttcggcgcccaatgaagattggccacgctggcacatg
tacgacttcttccactccttcctcattgtcttccggatcctctgtggagagtggattgag
aacatgtgggcctgcatggaagttggccagaagtctatctgcctcatccttttcttgaca
gtgatggtgctgggcaacctggtggtgcttaacctgttcatcgccctgctgctgaactcc
ttcagcgccgacaacctcacgccacctgaggacgacggtgaggtgaacaacctgcaggtg
gccttagcgaggatccaagtgtttggccagcacaccaagagggctctttgcagtttcctc
agtcggccctgcttgctcccctggcccaaggcagagccccagttggtggtgaaactccca
ctttccacctccatagccaagaaccacattgctgctgacacagccctggggagccccgga
cggctcccagctctcagaagccccagggatgaccacagtgacttcatcactgatcctaac
atatgggtctctgtgcctattgctgagggtgaatccgacctggatgacttggaggagaat
ggtgaggaggatgctcagagcactgggcaggaagcgatcccccaaaggcaggagcagctg
cagcaagttgggaagtatgaggatcacctgccacgcaggagcccggggtctggaatatcc
tctgaggacctgactccatacctaggtgagaagtggaaagacgagcctcctgctcagagc
cctgcaaagggagcagacgacacgagctcctcggaaggcagcactgtggacttcctggac
cccgaggagatcctgaggaagatccctgagctggcagacgacctcgatgagccagacgac
tgcttcacggaaggctgtgttcaccactgtccctgttgcagagtgaacagctccaggttt
ccatgggccacaggctggcaggtacgcaaggcctgctttcgcatcgtggagcacagctgg
tttgaaagtttcattgtcttcatgatcctgctcagcagtggagcactggcctttgaagat
ttttaccttgaccagaagcccacggtgaaggccttgctggagtacactgacagggtgttc
acgtttatctttgtgtttgagatgctgctcaaatgggtggcctacggctttaagaattac
ttcaccaatgcctggtgctggctagacttcctgatcgtgaacatctcactgacaagcctc
atagcgaagattctgcagtactctgacatggcatccatcaaagcccttcggaccctccgc
gccctgcggccactgcgggctctgtctcggtttgaaggcatgcgggtggtggtagatgcc
ctggtgggcgccatcccatccattatgaatgtcctgctcgtctgccttattttctggctc
atcttcagcatcatgggtgtgaacctcttcgcggggaagtttcagaaatgcatcaacaag
accaatgaaggctttcttcttgtgccttggtctactgtgaataacatgtctgactgtgaa
cgtcaaaaccacactggaagcttattttgggtcaatgtaaaggtcaactttgataacgtt
gcaatgggctacctcgcacttctgcaggtggcaacctttaaaggctggatggacatcatg
tatgcagctgtcgattcccgggatgtgaactttcagcccaagtgggaggacaacgtgtac
atgtacttttactttgtcatcttcatcatttttggcggcttcttcacactcaatctattt
gttggcgtcatcattgacaacttcaaccaacagaaaaaaaagttaggaggccaggacatc
ttcatgacagaggagcagaagaagtactacaatgccatgaagaagctgggctccaagaag
ccccagaagcccatcccacggcccctgaacaagtaccagggttttgtctttgacatcgtg
accaggcagacttttgacattgttatcatggtcctcatctgcctcaacatgatcaccatg
atggtggagactgatgagcagagtgaagaaaagacaaaagtcctgaacaaaatcaaccag
ttctttgtggccgtcttcacgggagagtgtgtcatgaagatgtttgccttgaggcattac
tacttcaccaacggctggaatgtgtttgacttcgtcgtcgtggtcctctccattgggagc
ctggtgttctctgcgattgttacctcacttggaagtttattctccccgacactcttccgc
gtcatccgcctggcccgcatcggccgcatcctcaggctgatccgcggggccaagggcatc
cgcacactgctctttgccctcatgatgtctctgcccgccctcttcaacatcgggctgctg
ctcttcctcgtcatgttcatctactccatcttcggcatggccagctttgctagtgtcaag
tgggaggccggcatcgatgacatgttcaacttccagacctttgccaacagcatgctgtgc
ctcttccagatcaccacatcggcgggctgggacgggctcctcagccccatcctcaacacg
ggacccccctactgcgaccccaacttgatcatcaacaacagcaccagaggggactgtggg
aatcccatcgtgggcatcatcttcttcaccacctatatcatcatctccttccttatcgtg
gtcaacatgtacattgcagtgattctggagaacttcaatgtggccacagaggagagcaca
gagcccctgagtgaggacgactttgacatgttctacgagacgtgggagaagtttgaccca
gaggccactcagttcattaccttctctgccctctcagacttcgcagatgccctgtctggc
cccctgagaatcccaaaacccaatcggaatgtattaatccagatggacctgcccttggtc
cctggagataagatccactgtttggacatcctgtttgctttcaccaagaatgtcctggga
gaatccggggagttggattcgctgaaggcaaatatggaggagaaatttatggcaactaat
ctttcaaaagcatcctatgaaccaatagcaaccaccctccgatggaagcaagaagacatt
tcagccactgtcatccaaaaggcctatcggagctacatgcggcaccgctccaggacgatc
gccagccctgcaggggtgcccagggctgaggaggaggcagcatcactctccaatgaacgc
tttgctgcgctcatagcaaatgaaaactgtgtgctcccagacaaatctgaaactgcttcc
accacatctttcccaccatcctacgacagtgtcactagaggccttagtgatcaagtcaac
ttgagcacatctagctccatgcaaaatgaaggggaggctgtcagtaaagaagccactggg
ccctcatgtggaccctccagcatgggcatgtccagttcggatgtgtccgctgctccgtga
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