Cervus canadensis (wapiti): 122429638
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Entry
122429638 CDS
T07554
Symbol
GTF2H4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03022
Basal transcription factors
ccad03420
Nucleotide excision repair
ccad05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122429638 (GTF2H4)
09124 Replication and repair
03420 Nucleotide excision repair
122429638 (GTF2H4)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
122429638 (GTF2H4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccad03021
]
122429638 (GTF2H4)
03400 DNA repair and recombination proteins [BR:
ccad03400
]
122429638 (GTF2H4)
Transcription machinery [BR:
ccad03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122429638 (GTF2H4)
DNA repair and recombination proteins [BR:
ccad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122429638 (GTF2H4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
122429638
NCBI-ProteinID:
XP_043306070
LinkDB
All DBs
Position
28:complement(20081135..20088733)
Genome browser
AA seq
463 aa
AA seq
DB search
MESTPSRGGLNRVHLQCRNLQEFLGGLSPGVLDRLYGHPATCLAVFRELPSLAKNWVMRM
LFLEQPLPQAAVALWVKKEFSKAQEESTGLLSGLRIWHTQLLPGGLQGLILNPIFRQNLR
IALLGGGKAWSDDTSQLGPDKHARDVPSLDKYAEERWEVVLHFMVGSPSAAVSQDLAQLL
SQAGLMKSAEPGEPPCITSAGFQFLLLDTPAQLWYFMLQYLQTAQSRGMDLVEILSFLFQ
LSFSTLGKDYSVEGMSDSLLNFLQHLREFGLVFQRKRKSRRYYPTRLAINLSSGVSGAGG
TAHQPGFIVVETNYRLYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIASGI
TAQQIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFE
LLLAHARELGVLVFENSAKRLMVVTPAGHSDVKRFWKRQKHNS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggagagcaccccttccaggggtggactgaatcgagtacacctacaatgcaggaatttg
caggaattcctaggaggcctgagccctggagtattagatcgattgtatgggcaccctgcc
acatgcctggctgtcttcagggagctcccatctttggctaagaactgggtgatgcggatg
ctctttctggagcagcctttgccacaagctgctgtagccctgtgggtgaagaaggaattc
agcaaagctcaggaggaaagcacggggttgctgagtggcctccgtatctggcacacccag
ctgctccctggtggtctccagggcctcatcctcaaccccatcttccgccaaaacctccgc
attgcccttctgggtgggggcaaggcctggtctgatgacacaagtcagctgggaccagac
aagcatgcccgggacgtcccctcacttgacaagtacgccgaggagcgatgggaggtggtc
cttcacttcatggtgggatcccccagcgcagccgtcagccaggacttggctcagctcctc
agccaggctgggctcatgaagagtgctgaacctggagagccgccctgcattacctctgct
ggcttccagttcctgttgctggacactccagcccagctctggtactttatgttgcagtat
ctgcagacagcccagagtcggggcatggacctagtggagattctctccttccttttccag
cttagcttctccactctaggcaaggattactctgtggaaggtatgagtgattctctgttg
aacttcctgcaacatctgcgtgagtttgggcttgttttccagaggaagaggaaatctcgg
cgttactaccccacacgcctggccatcaatctctcgtcaggtgtttctggggccgggggc
accgcacatcagccaggcttcattgttgtggaaaccaattaccgactgtatgcctacacg
gagtcagagctgcagatcgccctcattgcccttttctctgagatgctctatcgctttccc
aacatggtggtggcacaggtgacccgggagagtgtgcagcaggctattgccagtggcatc
acagcccagcagatcatccatttcctaaggacaagggcccacccagtgatgcttaaacag
acaccagtgctgcctcccaccatcacggaccagattcggctctgggagctggaaagggac
aggctccggttcaccgaaggcgtcctgtataaccagttcctgtcacaagtggactttgag
ctgctgctggcccacgcgcgggagctgggcgtcctggtgttcgagaactcggccaagcgg
ctcatggtggtgaccccggccgggcacagcgacgtcaagcgcttctggaagcggcagaag
cacaactcctga
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