Cervus canadensis (wapiti): 122435130
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Entry
122435130 CDS
T07554
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03013
Nucleocytoplasmic transport
ccad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122435130 (UPF3B)
03015 mRNA surveillance pathway
122435130 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122435130 (UPF3B)
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
122435130 (UPF3B)
mRNA cycle factors
P-body specific factors
122435130 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
122435130
NCBI-ProteinID:
XP_043314981
LinkDB
All DBs
Position
X:complement(129511001..129527215)
Genome browser
AA seq
483 aa
AA seq
DB search
MKEEKEHRPKEKRVTLLTPPGATGSGGGASGDSTKGEDKQDRNKEKKEALSKVVIRRLPP
TLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFL
DNKGQEYPAIVEFAPFQKAAKKKTKKRDTKVGTIDDDPEYRKFLESYAADNEKMTSTPET
LLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEE
KRKRKDIEKLKKIDRVPERDKLKDEPKIKVHRFLLQAVNQKNLLKKPEKGDEKELDKREK
LKKLDKENLSDERASGQSCTLPKRSEGEFKDEKPKRPEDESGREYRERERDYERDQERIL
RERERLKRQEEERRRQKERYEKEKAFKRKEEEMKKEKETLRDKGKKPETTEPVGSSEKTE
KKEEVVKRDRIRNKDRPAMQLYQPGARSRNRLCPPDDSTKSGDSAVEKKQESGISHRKEG
SEE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggagaaggagcataggcctaaggagaagcgagtaaccctcttgactccccca
ggtgctacaggcagcggcggtggggcttcgggagacagcaccaaaggggaagataagcag
gatcggaacaaggagaagaaagaggcgttgagcaaggtggtaattcggagattaccgccc
actttgaccaaggagcagcttcaggaacatcttcagcctatgcctgagcatgattatttt
gagtttttttctaatgatactagtttgtatcctcatatgtatgcaagagcatatatcaac
tttaaaaaccaagaggacattattttgttcagggatcgttttgatggttatgtattcctt
gacaataaaggtcaggaatatcctgccatcgtagaatttgcaccttttcaaaaagctgca
aaaaagaagactaagaaaagagatactaaagttgggactatcgatgatgatccagaatat
agaaaatttttggagagctatgctgcagataatgagaaaatgacatctactccagagaca
ctgctagaggaaatagaagcaaaaaatagagaactaatagctaaaaagacaactccactt
ttgagcttcctgaaaaacaagcagaggatgagagaagaaaagagagaagaaaggaggcgg
cgagaaatagaaagaaaaagacaaagagaagaagagaggaggaagtggaaagaagaagag
aaacgaaaacgaaaagatatagaaaagctaaagaagatagacagagttccagaaagggac
aaattaaaggatgaaccaaagattaaggtacacaggtttctgttacaagctgtgaatcag
aaaaatctgctcaagaagccagaaaaaggagatgaaaaagaattggacaaaagagaaaag
ctcaagaaattggacaaagagaatctgagtgatgaaagagccagtgggcaaagttgtaca
ttgcccaagcgttctgagggtgaatttaaagatgaaaagcctaagagacctgaagatgag
agtggcagagaatacagggagagggagcgggattatgaacgagaccaggagcgcatcctg
cgggagagagagaggctgaagcggcaggaggaagagcgccgcaggcagaaggagcgctat
gagaaagagaaggctttcaagagaaaggaagaagaaatgaagaaggagaaagaaacactt
cgggataaaggaaagaagcctgaaactacagagccagtaggcagctcagaaaaaactgaa
aagaaagaagaagtggttaagagagatcgcataagaaacaaggatcgcccggcgatgcag
ctttaccagccaggagctcgaagccgaaatcgactctgtccccctgatgacagcaccaag
tctggagattcagctgtagaaaaaaagcaggaaagtggtattagccatagaaaagaagga
agcgaggagtga
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