Cervus canadensis (wapiti): 122438220
Help
Entry
122438220 CDS
T07554
Symbol
ABCB1
Name
(RefSeq) ATP-dependent translocase ABCB1 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad02010
ABC transporters
ccad04976
Bile secretion
ccad05206
MicroRNAs in cancer
ccad05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122438220 (ABCB1)
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
122438220 (ABCB1)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
122438220 (ABCB1)
09162 Cancer: specific types
05226 Gastric cancer
122438220 (ABCB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccad02000
]
122438220 (ABCB1)
04147 Exosome [BR:
ccad04147
]
122438220 (ABCB1)
04090 CD molecules [BR:
ccad04090
]
122438220 (ABCB1)
Enzymes [BR:
ccad01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122438220 (ABCB1)
Transporters [BR:
ccad02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122438220 (ABCB1)
Exosome [BR:
ccad04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122438220 (ABCB1)
CD molecules [BR:
ccad04090
]
Proteins
122438220 (ABCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
Zeta_toxin
AAA_22
Rad17
RsgA_GTPase
AAA_5
AAA
AAA_14
G-alpha
AAA_29
PRK
DUF815
AAA_30
AAA_7
APS_kinase
NEMP
AAA_15
nSTAND1
NTPase_1
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
122438220
NCBI-ProteinID:
XP_043318788
LinkDB
All DBs
Position
3:30763184..30865536
Genome browser
AA seq
1283 aa
AA seq
DB search
MDLEDGRNGRAGGKNLKRDKKRFFSKKDEKKEKRPTVSTFAMFRYSNWLDRLYMVLGTLA
AIIHGAGLPLMMLVFGDMTDSFAGAGSLGNITFLNTTNTSIIDKTEQGKKLEKEMTTYAY
YYSGIGAGVLIAAYIQVSFWCLAAGRQVHRIRKQFFHAIMKQEIGWFDVHDVGELNTRLT
DDVSKINEGIGDKIGMFFQAMATFFTGFIVGFTQGWKLTLVILAISPVLGLSAAIWAKIL
SSFTDKELLAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNKNLEEAKRIGIKKAITAN
ISMGAAFLLIYASYALAFWYGTSLVLSEEYSIGQVLTVFFSVLIGAFSIGQASPNIEAFA
NARGAAYEVFKIIDNKPSIDSYSKTGHKPDNIKGNLEFRNVHFHYPSRSEVKVLKGLNLK
VGSGQTVALVGNSGCGKSTTVQLMQRLYDPTEGMVSIDGQDIRTINVRYLREIIGVVSQE
PVLFATTIAENIRYGREDVTMDEIQKAVKEANAYDFIMKLPNKFDTLVGERGAQLSGGQK
QRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTVRNAD
VIAGLDDGVIVEKGSHDELMGKRGIYFKLVTMQTKGNELELENTPGESLSEIDDLYTSFQ
DSRSSLIRRKSTRRSIRGSQSQDRKLSTEETLDESVPPVSFWRILKLNITEWPYFVIGVF
CAIINGGLQPAFSVIFSRIIGIFTRDEDDETKRQNSNLFSLLFLILGIISFITFFLQGFT
FGKAGEILTRRLRYMVFRSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGAIGSRLAVI
TQNIANLGTGIIISLIYGWQLTLLLLAIVPIIAVAGVIEMKMLSGQALKDKKELEGAGKI
ATEAIENFRTVVSLTREERFEYMYAQSLQVPYRNSLRKAHVFGITFSITQAMMYFSYAGC
FRFGAYLVAQGMMEFQDVLLVFSAIVFGAMAVGQVSSFAPDYAKAKVSAAHVINIIEKIP
LIDSYSTEGLKPSTMEGNVAFNEVVFNYPTRPDIPVLRGLSLEVKKGQTLALVGSSGCGK
STVVQLLERFYDPLAGTVSVDGKEIKHLNVQWLRAHMGIVSQEPILFDCSIGENIAYGDN
SRVVSQEEIERAAKAANIHPFIEMLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHI
LLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADMIVVFENGRIKEHGT
HQQLLAQKGIYFTMVSVQAGTKR
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgaagacggccgcaatggaagagcaggggggaagaacttgaaaagggacaaa
aaaaggtttttcagtaaaaaagatgagaagaaagaaaagagaccaactgtcagtactttt
gcaatgtttcgctattcaaattggctcgataggttgtatatggtgctggggactttggct
gccatcatccatggagctggactccccctcatgatgctggtgtttggagacatgacggat
agctttgcaggtgctggaagtttaggaaacataacttttttaaacacgactaatacaagt
attatagacaaaacagagcaaggcaagaagctggagaaggaaatgaccacgtacgcctac
tattactccggaatcggcgctggcgtgcttattgctgcttacatccaggtctcgttctgg
tgtctggccgctggaagacaagtacacagaatcagaaaacagttttttcatgccatcatg
aaacaggagataggctggtttgacgtgcatgacgttggagaacttaacacccggctcaca
gatgacgtctccaaaattaatgaaggaattggtgacaaaattggaatgttctttcaggca
atggcaacattcttcactggttttatagtaggatttacacaaggttggaagctcaccctt
gtgattctggccatcagtcctgttcttggcctgtcagctgctatctgggcaaagatactg
tcttcatttactgataaagaacttttggcatatgcaaaagctggagcagtagctgaagag
gtcttagcggctattagaactgtgattgcatttggaggacaaaagaaagaacttgaaagg
tacaacaaaaatttggaagaagccaagagaattggaataaagaaagctatcacggccaac
atctctatgggtgctgcttttctgttgatctatgcatcctatgccctggcattctggtat
gggacctccttggtcctctcagaagaatattccattggacaagtgctcacggtcttcttt
tctgtattaattggagcttttagtattggacaagcatctccaaacattgaggcatttgca
aacgcaagaggagcagcttatgaagtcttcaagatcattgataacaaaccaagcattgac
agctattcaaagactgggcacaaacccgacaatattaaaggaaatctggaattcagaaat
gttcacttccattacccatctcgaagtgaagttaaggtcttgaagggcctcaacctgaag
gtagggagcgggcagacggtggccctggttgggaacagcggctgtgggaagagcaccacc
gtccagctgatgcagaggctgtatgaccccacggagggcatggtcagtatcgacggacag
gatatcaggaccatcaatgtaaggtatctgcgggagattatcggggtggtgagtcaggag
cctgtgctgtttgccaccacaatagccgagaacattcgctatggccgtgaagatgtcacc
atggatgagattcagaaagctgtgaaggaagccaacgcctatgactttatcatgaaactg
cctaataaatttgacaccctggttggagagagaggagcccagctgagcggtggacagaag
cagagaatcgctatcgcccgggccctggttcgcaaccccaagatcctcctgctggacgag
gccacctcagcgctggacacggagagtgaagcggtggttcaggcggccctggataaggcc
agggaaggccggaccaccattgtgatagcgcatcgtctgtccacggttcgtaatgctgat
gtcatcgctggtcttgatgatggagtcattgtggagaaaggcagtcatgatgagctcatg
gggaagagaggcatttacttcaaacttgtcacaatgcagacaaaaggaaatgaacttgaa
ttagaaaatacccctggtgaatccctaagtgaaattgatgacttgtacacgtccttccaa
gattcaagatccagtctaatcagaagaaaatcaactcgcaggagtatccgtggatcccaa
agccaggacagaaagctcagtacagaagaaactttggatgaaagtgtacctccagtttcc
ttttggaggattctgaagctgaatataactgaatggccttattttgtgattggtgtattt
tgcgccattataaatggaggtctgcaaccagcattctcagtcatattttcaaggattata
ggaattttcaccagagatgaggatgatgaaaccaaacgacagaatagtaacttgttttca
ctgttgtttctaatccttggaattatttcttttattacatttttccttcagggcttcacg
ttcggcaaggcgggagagatcctcaccaggcggctgcggtacatggtgttcaggtccatg
ctgagacaggatgtgagctggttcgatgaccctaaaaacaccacgggagcattgacgacc
agacttgccaatgacgccgctcaagttaaaggggctataggttccaggcttgctgtaatt
acccagaatattgcaaatcttggcacaggcattattatatccctcatctatggctggcag
ttgacacttctcctgttagcaattgtacccatcattgcagtagcaggagttattgaaatg
aaaatgctctctggacaagccctgaaagataagaaagaactggaaggtgctgggaagatt
gccaccgaagcgatagaaaatttccggactgttgtttctttgactcgggaggagaggttt
gaatatatgtatgcccagagtttgcaggtaccatacagaaactctttgaggaaagcacat
gtctttggaattacattttccatcacccaggcaatgatgtatttctcctatgctggctgt
ttccggtttggtgcctacttagtagctcagggcatgatggagtttcaggatgttctctta
gtgttctcagctattgtctttggtgccatggctgtgggacaggtcagttcatttgctcct
gactacgccaaggccaaggtgtcagcggcccacgtcatcaatatcattgaaaaaattcct
ctgatcgacagctacagcacagaaggcctaaagccgagtacaatggaaggaaatgtggca
tttaatgaagtcgtgttcaactaccccactcgaccagacatcccagtgcttcgggggctg
agcctggaggtgaagaagggccagacgctggccctggtgggcagcagcggctgcgggaag
agcacggtcgtccagctcctggagcggttctacgatcccttggctggcacagtgtcagtc
gatggcaaggaaataaagcacctgaatgtccagtggctgcgagcacacatgggcatcgtg
tcccaggagcccattctgtttgactgcagcattggcgagaacattgcctacggagacaac
agccgcgtcgtatcccaggaggagattgagcgcgcggccaaggcggccaacatccacccc
ttcattgagatgctgccagacaaatacaacaccagagtaggggacaaaggaactcagctc
tctggtggccagaaacagcgcattgccatagctcgcgcccttgttagacagcctcacatc
ttgcttctggatgaagctacctcggctctggacacagaaagtgaaaaggttgtccaagaa
gccctggacaaagcccgagaaggccgcacctgcatcgtgatcgctcaccgcctgtccacc
atccagaacgcagacatgatcgtggtgtttgagaacggcagaatcaaggagcacggcacg
caccagcagctgctggcgcagaaaggcatctatttcaccatggtcagcgtccaggccgga
acgaagcgctag
DBGET
integrated database retrieval system
