Cervus canadensis (wapiti): 122439908
Help
Entry
122439908 CDS
T07554
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122439908 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccad03041
]
122439908 (DDX46)
Enzymes [BR:
ccad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122439908 (DDX46)
Spliceosome [BR:
ccad03041
]
Complex A
U2 snRNP components
U2 related factors
122439908 (DDX46)
Complex B
122439908 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
FAM176
Motif
Other DBs
NCBI-GeneID:
122439908
NCBI-ProteinID:
XP_043321412
LinkDB
All DBs
Position
4:complement(62352802..62404904)
Genome browser
AA seq
1032 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKAENRSRS
KEKTDSGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVK
KFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI
TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI
EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS
IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY
TFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF
DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA
PTAGNAEKLEIAKRLALRINAQKNLGIESQVDVMQQATNAILRGGTILAPTVSAKTIAEQ
LAEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRIS
EYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNS
YQPTNKGRYKVL
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgggcagggagtcacgccactatcggaagcgatcagcatcacggggacgctctggaagt
cgatctagaagtcgttcaccctcagacaaaagaagtaaacgtggagatgacagacggtct
agaagcagggatagagataggaggagagagaggtctcgtagcagggataaaagaagatct
cggtccagagacaggaagcgtctgaggcgttccagaagtagagagagagatagaagtcga
gaacgaagaagatctcgaagtcgggacaggagacgttcaaggagtagaagccgaggccga
agatcccgatcttccagtcctggcaataaaagcaagaaagctgagaataggtctagatcc
aaagagaaaacagatagtggggaaagttctaaagagaagaaaaaagacaaagatgacaaa
gaggatgaaaaagaaaaggatgctggtaactttgaccagaataagctagaagaagaaatg
agaaagcgaaaagaaagagtagaaaaatggcgagaagagcaacgtaaaaaggccatggaa
aacataggggaactgaaaaaggaaatcgaagagatgaaacaagggaaaaaatggagttta
gaagacgatgatgatgatgaagatgatcctgcagaggctgaaaaggaaggaaatgaaatg
gagggtgaagagttagatccattagatgcttacatggaagaagtgaaagaggaagtaaaa
aagtttaatatgagaagtgtgaaaggtggtgggggaaatgaaaagaagtctggtccaacg
gtcacaaaagttgtcacagttgtcacaaccaaaaaagcagttgtagattctgataagaag
aaaggtgagctaatggagaatgaccaggatgccatggagtattcttcagaggaggaagaa
gttgatcttcagacagctcttacaggttaccagacaaagcagagaaagcttctagaacca
gtggatcatggaaaaattgaatatgaaccattcagaaaaaacttttatgttgaagttcca
gaattggcaaaaatgtctcaagaggaggtgaatgtatttcggttggaaatggaaggcatt
actgtcaaagggaaaggttgccccaaaccaattaaatcttgggttcagtgtggaatttct
atgaagatcttaaattctctcaaaaagcatggttatgaaaagcccacgccaatccaaacc
caggcgattcctgcgataatgtctggacgagatttgattggtattgccaagacaggaagt
ggaaagaccattgcctttctgttgcccatgtttagacacatcatggatcagaggtcttta
gaagaaggagaggggccaatagctgtcatcatgactccaactcgagaactggctttacaa
attactaaagaatgtaagaagttttcgaagaccttgggccttagagtggtctgtgtttat
ggaggaacaggaatcagtgagcagattgctgagctgaaaagaggtgctgaaattattgtt
tgtacacctggtcgaatgattgacatgttagcagctaatagtggtcgggttacaaatctt
cgaagagtgacgtatgttgttttagatgaagcagacagaatgtttgacatgggttttgaa
ccacaggtcatgcgcattgtggataatgttcgccctgacagacagacagttatgttttca
gctactttccccagagctatggaagccttggctcggagaatcctgagtaaacccattgaa
gtgcaggttggaggcagaagtgtagtttgctcggatgtggagcaacaagtgattgtgatt
gaagaagaaaagaaattcttgaagctacttgaacttctcggtcattatcaagaatcagga
tctgtcattatatttgtggataagcaggaacatgctgatggtcttctgaaagatttaatg
agagcttcttacccttgcatgtctcttcatggaggcattgatcagtatgacagagatagc
atcataaatgattttaagaatgggacctgcaaacttcttgtggctacatctgttgctgcc
cgaggcctcgatgtgaagcatctgattcttgttgtaaactatagctgccccaaccattat
gaggattatgtgcacagagcaggacggactggaagagcaggcaacaaaggctacgcatac
acttttatcacagaagatcaagcccggtatgctggagacataattaaagcccttgaactg
tcagggactgcagtgccacctgatctagagaaactctggagcgatttcaaagatcaacag
aaagctgaagggaaaataattaaaaagagtagtgggttctctggtaagggattcaagttc
gatgaaacagaacaagctttggccaatgagagaaagaagttacaaaaagctgctcttggt
ctgcaagattcagatgatgaggatgctgcggttgatattgatgagcaaattgaaagcatg
tttaattcaaagaagagagtgaaggatatggcagctcctggaacatctagtgtgcctgct
cccactgcagggaatgctgagaaactggaaattgcaaagagattggctcttagaatcaat
gctcagaagaacttgggcattgagtctcaggtagatgtgatgcagcaggccaccaatgcc
attctcagaggtggcaccatcctggctcccactgtatctgcaaaaaccattgcagagcaa
cttgctgaaaagataaatgccaagctcaactatgtgcctttggagaaacaagaagaggag
agacaggatggtggacagaatgaatcttttaagagatatgaggaagaattagagatcaat
gacttcccacagactgctagatggaaagttacctctaaggaagctctgcagagaatcagt
gaatattctgaagctgcaattacaatcagaggaacgtacttcccacctggcaaagaaccc
aaggaaggagagcggaaaatttacttggcaattgaaagtgccaatgaactggctgtgcag
aaagcgaaggcagaaatcaccaggcttataaaagaagaactgatccgattgcaaaattca
taccaaccaacaaataaaggaagatacaaagtcttataa
DBGET
integrated database retrieval system
