Cervus canadensis (wapiti): 122441734
Help
Entry
122441734 CDS
T07554
Symbol
DHX58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58 isoform X1
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
122441734 (DHX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ccad04054
]
122441734 (DHX58)
Enzymes [BR:
ccad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122441734 (DHX58)
Pattern recognition receptors [BR:
ccad04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
122441734 (DHX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
DEAD
ResIII
Helicase_C
SWI2_SNF2
AAA_19
Helicase_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
122441734
NCBI-ProteinID:
XP_043324644
LinkDB
All DBs
Position
1:20235876..20245464
Genome browser
AA seq
680 aa
AA seq
DB search
MELRPYQWEVIMPALEGKNIIVWLPTGSGKTRAAAYVAKRHLETVDGAKVVVLVNRVHLV
SQHCEEFSRMLERRWTITTLSGNMGPRAGFGHVARRHDLLICTAELLQKALASPEEEEHV
ELNAFSLLVVDECHHTHKDTVYNIILSRYLELKLQRTRPLPQVLGLTASPGTGGASTLEG
AIDHVLQLCANLDTWRIMSPQDHRLQLQEHSHQPCKQYDLCYRHTQDPFGDMLKKLMDQI
HDHLEMPELRRDFGTQTYEQQVVELSQDAAEAGLLDRRVYALHLRRYNDALLIHDTVRAV
DALDTLRDFYNRERATKTQILHAERWLLALFDDHENELTRLATSSRENPKLEVLEAILLK
QFRSPDSPRGIIFTRTRQSAHSLLLWLQQQPGLQTVDIRPQVLIGAGNNSQKTQLIQMTQ
RDQQEVIQKFRNGTLNLLVATSVAEEGLDIPQCNVVVRYGLLTNEISMVQARGRARASQS
MYSFVAAQGSRELRRELTNEALETLMERAVAAVQAMDQAEYQAKIRDLQRAALVKRAVQA
AQRESQQRKFLAEQVQLLCINCMVSVGYGSDLRKVEGTHHVNVNPNFSIYYNISKQPVVI
DRDFKDWRPGGAISCRNCGEAWGLQIIYKSVKLPVLKVGSMLLETPQGRVRAKKWSRVPF
TVPDFDYVQCAEGLAGLSLD
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgaccctaccagtgggaggtgatcatgcccgctctggagggcaagaatatc
atcgtatggctgcccacgggctctgggaagaccagggcagctgcttatgtggccaagagg
catctagagaccgtggacggagccaaggtggttgtattggtcaacagggtgcacctggtg
agtcagcattgtgaggagttcagccgcatgctggagagacgctggaccatcacaaccctg
agcgggaacatggggccacgagctggctttggccacgtcgcccggaggcacgacctgctc
atctgcacggctgagctgctgcagaaggcactggccagcccagaagaggaggagcatgtg
gagctcaatgccttctcgctgctggtggtggatgagtgtcaccacacgcacaaagacacc
gtctacaacatcatcctgagccgatacctggagcttaaactccagaggacccggccgctg
ccacaggtgctgggtctcaccgcttccccaggcactgggggcgcctccacgctcgagggg
gccattgaccacgtcctgcagctctgtgccaacctggacacatggcgcatcatgtcaccc
caggaccatcgcctccagctccaggagcacagccaccagccctgcaaacagtatgacctc
tgctacaggcacacccaggacccgtttggggacatgctgaagaagctcatggaccaaatc
cacgaccacctggagatgcccgagttgagacgggacttcggcacgcaaacctacgagcag
caagtggtggaactgagccaggatgcggctgaagcggggctcctggatcggcgggtgtac
gcgcttcacctgcgtcggtacaacgacgcgctgcttatccacgacacggtccgcgcggtg
gatgccctcgacacgctgcgagatttctacaacagggagcgcgccactaagacccagatc
ctacatgccgagcgctggctgctggcgctgtttgatgaccacgagaatgagctgacccgc
ctggcaactagcagccgggagaacccgaaactggaggtgctggaagcgatcctgctgaag
cagttcaggagccctgacagcccccggggcatcatcttcacccgaacccgccagagtgct
cactccctcctgctgtggctccagcagcagccaggcctgcagacagtggacatccggccc
caggtgttgattggggctgggaacaacagccagaagactcagctgatccagatgacacag
cgggaccagcaagaagtaatccagaagttccggaatggtaccctgaacctcctggtggcc
acgagtgtggcagaggaggggctagacatcccccagtgcaatgtggtggtgcgctatggg
ctcctgaccaatgagatctccatggtccaggcaaggggccgggcccgggccagccaaagc
atgtactcgtttgtggcagcccaaggcagtcgggaactgcggcgggagctgacgaatgag
gcgctggagactctgatggaacgggcagtggcagctgtgcaggcgatggaccaggccgag
taccaggccaagatccgggatttgcagcgggcagcattggtcaagcgggcagtccaggca
gcccagagagagagtcagcagcgcaagttcctggcggagcaggtgcagctcctctgcatc
aactgcatggtgtccgtgggctatgggagtgacctccggaaggtggagggtacccaccac
gtcaatgtgaaccccaacttctcgatctactacaacatctcaaagcagcctgtggtcatc
gacagagacttcaaggactggagacccgggggtgccattagctgccggaactgtggggag
gcctggggtctgcagataatctacaagtcagtgaagcttccggtgctcaaagttggcagt
atgctgctggagacaccacaagggcgagtccgggccaagaagtggtcccgcgtgcccttc
actgtgcctgactttgactatgtgcaatgtgcagagggcctggccggcctctctctggac
tga
DBGET
integrated database retrieval system
