Cervus canadensis (wapiti): 122447916
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Entry
122447916 CDS
T07554
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03250
Viral life cycle - HIV-1
ccad04623
Cytosolic DNA-sensing pathway
ccad05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122447916 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
122447916 (SAMHD1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
122447916 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccad03400
]
122447916 (SAMHD1)
DNA repair and recombination proteins [BR:
ccad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
122447916 (SAMHD1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
HD_assoc_2
SAM_2
PDEase_I
SAM_1
Motif
Other DBs
NCBI-GeneID:
122447916
NCBI-ProteinID:
XP_043334615
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Position
10:complement(64732654..64787084)
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AA seq
613 aa
AA seq
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MQSADSQNPPKRSRRDGSPKTPPNSPPADAETSPSHDLHPDHRTWGPKQVCSFLRLCGFS
DSELLKRCREKKMTDSLLPFLDESRPEDLEISSCGKRMKLLNCIQHTMKVINDPIHGHIE
FHPLLIRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLVRELSEKQP
ELQISERDILCVQIAGLCHDLGHGPFSHMFDGRFIPLARPGMKWTHEQGSVMMFEHLINS
NGLQDVMKSYGLIPEEDISFIKEQITGPPASPIKDSSKWLYKGRPKEKSFLYEIVANKRN
GIDVDKWDYFARDCHHLGIQNSFDYKRFIKFARVCEVDNMKHICTREKEVGNLYDMFYTR
NCLHRRAYQHKVGNIIDTMITDAFLKADPYIEIIGSRGNKYRISTAIDDMEAFTKLTDNI
FLEILYSTDPRLDAARTILKKIESRNLYKFVGETQPKKQRIQKEDYEHLPEEVASAKPSD
VQLEAELKAEDVIVDVINMDYGMEDKNPIDHVRFYCKSDLSKAIIITRDQVSQFLPGTFA
EQLIRVYCKKTDEKTLFAARQHFVHWCLINDFTKPQDGDVVAPLITPRKLEWNTAGIQEG
SKAKTQLFSDDSL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtgccgactctcagaatccccccaagcggtcccggcgcgacggcagcccaaaa
acgccgccaaactcccctcccgcagacgcagagacgtccccgagccacgacctgcacccg
gaccaccgaacctggggcccgaagcaggtgtgctccttcctaaggctctgtggcttcagc
gattcggaactgctgaaacgctgccgagagaagaaaatgacagattcattactgcccttt
cttgatgagtcacgtcctgaagatcttgaaataagttcctgtgggaagagaatgaagctg
cttaattgtatccaacatacaatgaaggtgattaatgatcctatccatggccacattgaa
tttcaccctctcctcatccgaatcatcgacacacctcaatttcagcgcctgcgatacatc
aagcagttgggaggcggttactatgttttcccaggagcgtcacacaatcgatttgagcac
agtctaggtgtggggtatctagcaggatgtctagttcgtgaactgagtgaaaaacaacca
gagttgcagataagtgaacgagatatcctctgtgttcagatcgctggtctttgtcatgat
cttggtcatgggccattttctcatatgtttgatggaagatttattccacttgctcgacca
gggatgaaatggacgcatgaacagggctcagttatgatgtttgagcacctcatcaattct
aacgggctccaagatgtcatgaaaagctatggtctcatccctgaagaagatatttcgttt
atcaaggaacaaattacaggaccacctgcatcacccatcaaagattcttcaaagtggctc
tataaagggcgtcctaaagaaaaaagcttcctttatgagatagtggccaataaaagaaat
ggcattgatgtggacaaatgggattattttgccagggactgccatcatcttggaatccaa
aatagctttgattacaagcgctttattaagtttgcccgtgtctgtgaagtagataatatg
aagcatatttgtactagagaaaaggaggttggaaacctgtatgacatgttctatacacgc
aactgtttgcaccgcagagcttatcaacacaaagttggcaacatcattgatacaatgatt
acagatgccttcctcaaagcagatccttacatagagataataggttctagaggaaataag
tatcgcatttctacagcaattgatgacatggaagccttcactaagctgacagataacatt
tttctggagatcttatactccactgatcccagattggatgctgcacgaacaattttaaag
aaaattgaatcccgtaatctatacaagtttgtgggtgagactcagcccaagaaacaaaga
attcaaaaggaagactacgaacaccttccggaagaggtcgccagtgctaaacccagtgat
gtacagctagaagctgaactgaaggctgaagacgtgatagtggatgttatcaacatggat
tatgggatggaagacaagaatcctattgatcatgttcgcttctattgtaagagtgacctc
agcaaggcaatcataattactagagaccaggtgtctcagtttttgccagggacatttgct
gagcagctgattcgagtttactgtaagaagacagatgaaaagactctgtttgctgcacga
cagcatttcgtccattggtgtttaatcaatgacttcaccaagccacaggatggtgacgtt
gtagccccgcttataacacctcggaaattggagtggaatacagctggcatccaggaaggg
tccaaagccaaaacccagcttttctcagatgactcgctgtga
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