Cervus canadensis (wapiti): 122448682
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Entry
122448682 CDS
T07554
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccad03036
]
122448682 (CHD6)
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122448682 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
122448682
NCBI-ProteinID:
XP_043336116
LinkDB
All DBs
Position
10:complement(68692270..68887253)
Genome browser
AA seq
2721 aa
AA seq
DB search
MIMKIQKKEKQLSSLKVPNHSPMSDASVNFDYTSPSPFDHSTDQEEKIEDVASHCPAQKD
LYAVEEEAGPLFPRKTASHNGMEDSGGGGTGVKKKRKKKDPGEQEGAAKGSKDREPKPKR
KREPRELKEPRKAKEPRKAKEPREPKQKDGAKKARKPREASGPREAKEKRGGPDSAARTK
SRKASKEQGPTPVEKKKKGKRKSETAVESLELDQGLPNPSLRSPEESTESADSQKRRSGR
QVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILAS
KTVQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKH
IFTEPDEDLFNPDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDP
AKVKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRK
NCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYH
GSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEA
HRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFG
DLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFS
FLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQ
AAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQA
AIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSK
AVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGA
YGALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDP
NFWQKWAKIAELDTEAKSEKESLVLDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPT
RSRRLNDKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVY
CVKHYKGDEKIKSFIWELITPTKDGQAQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKN
ADWLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGTPAREL
DVPLPDIDYVEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKSL
SAEQGVTDGASDVPERGNTDKEDNTEDKVDGPQKQVESSSDGGDGLFAEKKDDTRAAQDG
SDPDKSPWPVSSALTARLRRLVTIYQRCNRKELCRPEVLGLGNQGYWVQEEMFRRSSEME
LINKEAQKRWTRREQADFYRTVSSFGVVYDQEKKTFDWTQFRVISRLDKKSDESLEHYFY
SFVSMCRSVCRLPAWKDGGPLDPSIYVEPITEERAARTLYRIELLRKVREQVLTCPQLHE
RLQLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYVMTDPQLSFLDAYRNYAQHKR
PDPQAPESLCCLYQTNSKLYESLAYTHMSRTSESLENEPENLVKIEGRDDHLGPPRGSLS
DMTCESFISKTQDVLSLTHDESLLPGSLESMMYGKKALSQETGPFQGSPGASTESRQVTA
AISAGRDGDCQPRGHEAKIASDSSFMETLEAGVAQMNIKNEKHLLMSLSKEGELSCSEAG
PRPESIGRLGSNCFASPSLDPGNESGFVDMCNLSVCDSRRNMSSDQQLIDLLESKSLESK
LVLGPNHSDEEDDEDENEEESLELAAGRRERLTASPLSEPTTRMAGEQSLAGFLTEEAKK
GSTEARSQPLGPQGPFLPAACQCHCKHVKRWAHGLEKDEFEVEKPQAYPPDPFISKANNV
TMRGEPTAVPPELFQVKQELLKEPWKESTEGNQGLPPYPEGSEVKPEDMDYESKEEFDKD
GNCQSQDYPGKYSEEESKSSTSGIAGDLGDDLQEARAPTIAQLLQEKTLYSFSEWPKDRV
IINRLDNICHVVLKGKWPSSQQYEPVGTLPTPLLTGSAGPRSGLSEPEASEHGFSNGAAL
VAQMQKESFLAPVFTKDEQKHRRPYEFEVERDSKTRSLEQFPAPHGHPPIVLNGWHGESA
IDLSCPSEGSPGATSPFPVGASTPKMGAIGSLQGALGMDLSGILQAGLIHPVTGQIVNGS
LRRDDAASRRRRGRRKHVDGGVDLIFLKEQTLQAGILEVHEDPGQAPLSTPHPPEGPVPA
TSIPEPTPAASSPAEKAIPSKSLLDWLRQQADCSLEVPGFSTNFSDKPKQRRPRCKEPGT
LDVTSLSGEERVPAVPKEPGLRGFLPENKFNHTLPEPVLRDTGPRRRGRRPRSELLKTPA
LVADTPSGMGPLFMNGLIAGMDLVGLQNMRNVPGIPLTGLVGFPAGFAAMPPGEEVKSTL
SMLPMVLPGMAAVPQMFGVGGLLNAPMATTCASAVPAPLSSTTKGGASAAEKTAEDQPGS
HDVKTDPSAEDKPGPSPFSSDQPEPAITTSSPVAFNPFLIPGVSPGLIYPSMFLSPGMGM
ALPAMQQARHSEAAGLESQRRKRKKTKGDTPNPNPEPVPGPEREPGSEQSCPEPRAPAPP
DREHAAQAREGGPQDSLGDTN
NT seq
8166 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatacagaagaaagagaagcagttgtcaagtctaaaagttccgaatcac
tccccaatgtctgatgcctctgtcaattttgactacacatccccctccccgtttgaccac
agcactgaccaggaggagaaaattgaagatgtcgccagtcactgtccagcccagaaggac
ctgtacgctgttgaagaggaggctgggcccctttttcccaggaaaacggcgtcccataac
ggtatggaggacagtggtggaggaggtacaggcgtgaagaagaaacgcaagaaaaaggat
ccaggggagcaggaaggggcagcaaagggaagcaaggacagggagcccaagccaaagagg
aagcgcgagcccagagagctgaaggagcccaggaaggccaaggagcccaggaaggccaag
gagcccagggagcccaagcagaaggacggcgccaagaaggcgcggaagccccgcgaggcc
tcgggccccagggaggccaaagagaagaggggcggccctgactctgcggccaggacgaag
tccaggaaggccagcaaggagcaaggaccaaccccagtggagaaaaagaagaaaggaaaa
aggaaaagtgaaaccgcagtggagagtttagagctggatcagggcctgccgaacccatcc
ctgcggagccccgaggagtccactgagtctgcagacagccagaaacgacgctcagggcgg
caagtgaagcgcagaaaatacaacgaggacttggacttcaaggtggtggacgatgacggg
gaaaccattgccgtgctcggggccggccggacgtccgccctctcagcttctaccctggcc
tggcaggcggaggagcctccagaagatgacgcaaacatcattgagaagatcctggcctct
aagactgtccaggaggtccacccgggagaacccccattcgacctggagctgttctacgtc
aagtatagaaatttttcctacttacactgtaaatgggccacaatggaagaactcgaaaag
gaccctcgcatcgcacagaagatcaagcgatttaggaataaacaagcccagatgaagcac
atttttactgagcctgacgaagacttgttcaacccagactatgtggaggttgatcgcatc
ttagaggtggcccacaccaaggatgcagaaaccggagaggaagtgacgcattacctggtg
aagtggtgctcactgccttacgaagagagcacatgggaactggaggaggacgtggatcct
gccaaagttaaagaattcgaatctctgcaagtgctccccgaaatcaagcacgtggagcga
cccgcttcagactcctggcagaaactggagaagtcgagagagtataagaacagtaaccag
ctccgggagtaccagctggaggggatgaactggcttctttttaactggtataacagaaaa
aactgcattttggctgatgaaatgggcctagggaaaaccatccagtccatcacgttcctt
tcagaaatattcctcaggggcatccacggccctttcctcatcatcgccccactctccacc
atcaccaactgggagcgggagttccggacgtggacagaaatgaatgccatcgtgtaccat
ggcagccagatcagcaggcagatgatccagcagtatgagatggtgtacagagatgcacag
ggaaaccccctgtcaggcgtcttcaagttccatgttgtcattacaacatttgagatgatc
ctggcagactgcccagagctgaagaagattcactggagctgtgtgatcatcgatgaagcc
cacaggttgaagaacaggaactgcaagcttctggagggcctgaagctcatggccctggag
cataaggtgctgctcacggggacgcccttgcagaattcggtggaggagctcttcagtctg
ctcaacttcctggagccgtcacagttcccttcggagactgctttcttggaggagtttgga
gatctgaagacagaggagcaggtgaagaaactgcagtctatcctcaaaccgatgatgctt
cggcggctgaaagatgacgtggaaaagaacctcgctcccaagcaagagacgatcatcgaa
gtagagctgaccaatatccagaaaaagtactaccgtgccatcctggagaagaacttttcc
ttcctaaccaagggggccaaccagcacaacatgcccaatctcatcaacaccatgatggag
ctgaggaagtgctgcaaccacccctacctgatcaacggggcagaggagaaaattctggaa
gacttccggaaaacccacagccccgatgccccggactttcagctgcaggccatgatccag
gccgcagggaagctggtgctgattgataaactgctccctaagctgatcgctggtggccac
aaagtgctcatcttctcacagatggtgcgctgtctcgacatcctggaagattatctcatc
caaagaagatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggca
gccatcgaccggttctgtaagccagactcagaccgctttgtctttcttctgtgcacccga
gcgggaggcctggggatcaatctcacagctgccgatacctgcatcatatttgattcagac
tggaacccacaaaatgacttgcaggctcaggcccggtgtcaccggataggccagagtaaa
gccgtgaaggtgtatcgcctcatcacgcggaactcctacgagcgggaaatgttcgacaag
gccagcctgaagctgggcctggacaaggccgtccttcaggacatcaaccggaagggcagc
acgaatggcgtacagcagctctcaaagatggaggtagaggacttgctccggaaaggtgcc
tatggcgccttgatggatgaagaggacgaaggctccaagttctgtgaagaagacatagac
cagatcctgcagaggaggacgcataccatcaccatccagtctgaggggaaaggatccact
ttcgccaaggctagctttgtggcttcagggaacagaacggatatttccttagatgaccca
aacttttggcagaagtgggctaaaatagctgaactggacactgaagcaaagagtgagaag
gagagcctggtgctcgaccgcccgcgcgttcggaagcagaccaaacactacaactctttc
gaggaggacgagctcatggagttttcagagctggacagcgactctgacgagaggcccaca
aggtcccggcgcctcaatgacaaaaccaggcgctacctccgggccgagtgcttccgggtg
gaaaagaacctgctcatcttcggctggggccggtggaaggacatcctgacgcacgggcgg
ttcaagtggcatctgaacgagaaggacatggagatgatctgccgggccctgctggtatac
tgcgtcaagcactacaaaggggacgagaagatcaagagctttatctgggagctgatcacg
cccaccaaagacgggcaggcccagacgctccagaaccactcaggcttgtccgctccggtc
cccagagggaggaaggggaagaagacgaagaaccagctgctgctcccggagttaaagaat
gcagactggctggccacctgcaaccccgaggtggtcttacatgacgacggctacaagaag
cacctcaaacagcactgcaacaaggtccttctgcgagtccggatgctctactacctaaaa
gctgaaatactgggagaagcagcagataaagcatttgaaggaactccagccagggagctg
gatgtgcccctgcctgacatcgactatgtggagatcccggtggactggtgggacgccgag
gccgacaagtccctcctgattggcgtgttcaaacacggttacgagaggtacaacgccatg
cgagccgacccagcactttgcttcctggagaaggtgggcatgccagatgagaagtcgctt
tctgcagagcagggtgtcacggacggggcctcagacgtccctgaaagaggcaacacggat
aaagaagacaatacagaagacaaagtagatggccctcagaaacaagtggagagttccagt
gacggaggtgatggcctttttgctgaaaagaaggatgacacccgggcagcccaggatggc
tccgacccagacaaatcgccctggccggtttcatccgcactcactgctcgtctccgacgc
ttggtcaccatttaccagcgctgtaaccgcaaggagctctgccggcctgaagtcctggga
ctaggaaaccagggctactgggtccaggaagagatgttccggaggtcctcagagatggag
ctcatcaacaaggaagcccaaaagaggtggacgaggagggagcaagccgacttctacaga
acagtgtcttcctttggtgtcgtttacgatcaagagaagaaaacctttgactggacgcag
tttcgcgtcatttcccgtctggacaagaagtcggacgagagcctggagcactatttctat
agcttcgtgtccatgtgccgcagcgtctgtcgtctgccggcctggaaggacggtggcccc
ctggatcccagcatctacgtggagcccatcacggaagagcgggccgcgagaacgctgtac
cgcatcgagctgctgcggaaggtccgggagcaggtgctcacatgtcctcagctgcatgag
cgcctgcaactctgcaggcccagcctctacctgcccgtctggtgggagtgcgggaagcac
gaccgcgacctgctgatcggcaccgccaagcacggcctgaaccgcaccgactactacgtc
atgaccgacccccagctgtccttcctggacgcctacaggaactacgcccagcacaaaaga
cctgacccccaggccccagagagtctctgttgcctctaccagaccaactccaaactgtat
gagtctctggcctatacgcacatgagccggacttccgagtcccttgaaaacgaacctgag
aacctcgtgaaaatcgaaggtagagacgatcaccttggtccacccaggggcagcttatct
gacatgacctgtgaaagcttcatctctaaaactcaggatgtcctttccctcacccatgac
gagagtctgctgcctgggtccttggagagcatgatgtacggaaagaaggcgctaagccag
gagacaggcccttttcagggcagcccaggtgccagtactgagtccaggcaagtcaccgcg
gccatctccgcaggcagagacggggactgccagccccggggccacgaggcaaaaatagcc
tcagattcctcttttatggaaactttagaagcaggagtagctcagatgaacattaaaaac
gagaaacacctgttgatgtctctttcaaaggaaggggaactcagctgcagcgaggccggg
ccaagacctgaaagcattgggcggctgggctccaactgcttcgcctccccttctttggac
ccagggaatgagagcgggttcgtcgacatgtgcaacctgagtgtctgcgactccagaaga
aacatgtcatctgaccagcagctaatcgacttactagaaagcaaaagcttagaaagcaaa
ttggttttgggtccgaaccacagcgacgaggaggacgacgaggacgaaaacgaggaggaa
agccttgagctggccgcaggcaggcgggaaaggctgacagcgtcgcctctcagcgagccc
accacccgcatggcaggggagcagagcctggccggcttcctcacagaggaagccaagaaa
gggagcacggaggccagaagccagcctcttggacctcagggccctttccttcctgcagcc
tgtcagtgtcactgcaaacacgtgaagaggtgggcgcatggcctcgagaaggacgagttt
gaagtggagaaaccccaggcttaccccccagaccccttcataagcaaagccaataatgtc
acaatgaggggtgagcccactgctgtcccacctgagctgttccaagtgaagcaggaactt
ctgaaggaaccctggaaagagagcacagaagggaaccaaggtctccctccgtatcctgaa
gggagtgaggtcaagccggaagacatggattatgagagtaaagaggagttcgataaagac
gggaactgccagagtcaagattatccagggaagtactctgaggaggagagcaagagctcg
acctcgggcatcgcgggagaccttggggacgacctgcaagaggcgcgggctcccaccatt
gctcagctgctccaggagaaaacgctctattcattctccgagtggccaaaggatcgcgtg
ataatcaaccgcctagataacatctgtcacgtggtgttaaaggggaagtggccctccagc
cagcagtacgagccggtgggcacactgcccaccccgttgttaaccggcagcgctggtccc
cgaagcggcctctcggagccagaggcatcggagcatggcttcagcaatggtgcagcattg
gtggcccagatgcagaaggagagcttcttggctccggttttcacaaaggatgaacagaag
cacaggcgtccttatgagttcgaggtagagagggattcgaagacgcggagcctggagcag
ttcccggccccccacgggcacccccccatcgtcctcaacggctggcatggagagtcagcc
atagacctctcctgcccgtcggaggggtccccaggggccacatcccctttcccagtgggc
gccagcacccccaagatgggggctatcggttcactgcaaggagcccttggcatggacttg
tcgggcatcctgcaagctggcctgatccacccagtgaccggacagatcgtcaacggaagc
ctcaggagagatgacgctgcctccaggaggcggagaggaaggcggaaacatgttgacgga
ggggtggacctcatcttcctgaaggagcagaccctgcaggctggcatcttggaagtccac
gaagacccaggacaggctcccctgagcaccccacaccctcctgaagggccggtgcccgcc
acatcgatcccggagccgaccccggccgccagcagcccggccgagaaagccattcccagc
aagagcctgttggactggctgcggcagcaggccgactgctccctcgaggtcccaggcttc
agcacgaatttttcagacaaaccaaagcagaggaggccacgctgtaaggagcctggaacg
ttagacgtcacctccctgagtggggaagagagggttcctgctgtccccaaggagccaggc
ctgagggggtttctcccagaaaacaagttcaatcacaccctgcccgagcccgttctccga
gacacgggcccccgccgcaggggcaggcggccacggagcgagctgctgaagaccccagcc
ctagtggcggacaccccctccgggatggggccgctgttcatgaacggcctgattgccggg
atggacctggtcgggttgcagaacatgagaaacgtaccgggcatccccctcacggggctg
gtggggttcccggccggcttcgcggcgatgcccccaggcgaggaggtcaagagcacgctg
agcatgctgcccatggtgctgccgggcatggccgccgtgccccagatgttcggggtcggg
gggctcctcaacgcccccatggccaccacctgcgcctcggccgtgccagcgcccctgtca
agcacaaccaagggcggcgcatcggcggccgaaaagactgcggaagatcagcccggcagc
cacgacgtcaaaacggacccgtcagccgaagacaagcccggccctagccccttttcctcc
gaccagcccgagcccgcaataactacaagcagccccgtggcgtttaacccgttcctcatc
ccaggcgtttcccccggactcatctacccttccatgttcctctcccctggcatgggcatg
gcgctgccggccatgcagcaggccagacactctgaagcagcaggtctggagagccagagg
aggaagcggaagaaaaccaagggggacaccccgaaccccaacccagagcctgtgcctggg
ccagagagggaaccgggcagcgaacagagctgcccagaacccagggctcccgcacccccc
gatagagaacatgcggcacaggcccgggaagggggcccccaggactctcttggtgacacc
aattag
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integrated database retrieval system
