Cyanistes caeruleus (blue tit): 111924951
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Entry
111924951 CDS
T05602
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03013
Nucleocytoplasmic transport
ccae03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111924951 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
111924951 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccae03019
]
111924951 (THOC1)
03041 Spliceosome [BR:
ccae03041
]
111924951 (THOC1)
Messenger RNA biogenesis [BR:
ccae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
111924951 (THOC1)
Spliceosome [BR:
ccae03041
]
Complex C
Other components
EJC/TREX
111924951 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
111924951 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
Motif
Other DBs
NCBI-GeneID:
111924951
NCBI-ProteinID:
XP_023777042
LinkDB
All DBs
Position
2
AA seq
664 aa
AA seq
DB search
MSPPLFSLPEARLRFTTSTREALINKSIKPLLNAFNQVPGSENEKKCTLDQAFRVVVEEE
IINKAPCENLLAIISLAINGVTEGICTASTPFVLLGDVLDCLPLDQCDKIFTFVEKNVAT
WKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQFN
LENVTVFNTNEHESTLGQKHTEEREEGMDVEEGEMGDDEAPTSCSIPIDYNLYRKFWSLQ
DYFRNPVQCYEKVSWKTFLKYSEEVLAVFKSYKLDDTQASRKKLEELKTGGEHVYFAKFL
TSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKAVYQ
LLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERSHPEFQLGPPDSKPMRPMR
KRPAPEDFLGKGSNKKILMGNEELTRLWNLCPDNMEACKSESREYMPTLEEFFEEAIEQA
DPENMVENKYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELP
PPSEEIKTGEDEDEEDNDALLKENNESPEVQRDKAMTGEQIESFAHRLGEQWKALAPYLE
MKESDIRQIELDSEDVKMRAKQLLVAWQDQEGAHATPENLITALTKAGLGDLAESLTNDT
EGSS
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgccgctcttcagcctgcccgaggcgcggctccgcttcacgacatccaccaga
gaggctctgattaacaaaagcatcaagccgttgttgaatgcatttaaccaggttcctgga
agtgaaaatgaaaagaagtgtaccttggatcaggcttttagagttgttgtagaagaagaa
ataataaacaaagctccgtgtgagaatctcctggcaattatttctcttgctattaatgga
gtcacagaaggtatctgcactgcatcaactccttttgtgcttttgggggatgttctggat
tgcctccctttggatcagtgtgacaaaattttcacttttgtggagaaaaatgttgcaacg
tggaaatcgaacacattttactctgcagggaaaaattacttgcttcgcatgtgcaatgac
ctcctaagaagattatctaagtcacaaaacacagtcttttgtggaagaattcagctgttc
ttggctaggttatttccactttcagaaaagtcagggcttaacctacagagtcagtttaac
ctggaaaatgtcactgttttcaataccaatgaacatgagagcactttgggacagaagcat
actgaggagagggaagaaggaatggacgtggaagaaggtgaaatgggagatgatgaagca
ccaacaagttgttccattccaatagattataacctgtatagaaaattctggtcacttcaa
gattattttagaaatcctgtgcagtgctatgagaaggtgtcatggaaaacatttcttaag
tactcagaagaagttttggctgttttcaaaagttacaaattggatgacactcaggcttcc
cgaaaaaagttggaagaactaaaaacaggaggagaacatgtatattttgcaaagttccta
actagtgaaaagctgatggatttacagctgagtgacagtaacttccgtcgtcacatcttg
ttgcagtacctaatactatttcagtatctaaagggacaagtcaaatttaaaagttcaaac
tatgttctaacagatgaacagtctctttggattgaagatactacaaaagcagtctaccag
cttctttcagaaaatcctccagatggggaaagattctcaaaaatggtagagcatatatta
aatactgaagaaaactggaactcgtggaaaaatgagggctgcccgagctttgtgaaagaa
agatctcatccagagtttcagcttggacctcctgattctaagccaatgaggcctatgagg
aagaggccagctccagaggacttcttaggaaaaggatcaaacaaaaaaatccttatgggg
aatgaggaactgacccgcctttggaatttatgtcctgataacatggaagcctgtaaatct
gagagtagggagtatatgccaacactggaggaattttttgaagaagctatagaacaagca
gaccctgaaaacatggttgaaaataaatataaggctgtgaacaattctaactatggctgg
agagcactgagactcctggcacgcagaagtccccacttcttccagccaacaaaccaacaa
ttcaagagtttacctgaatatctagaaaacatggtaatcaaattagccaaggagctgcct
cctccgtctgaagaaataaaaacaggtgaagatgaagatgaggaagataatgatgcttta
ttaaaggaaaacaatgaaagtccagaggtgcagcgggacaaagccatgacgggcgagcag
atcgagtccttcgcgcacaggctgggggagcagtggaaggccttggccccctacttggag
atgaaggaatctgatatccggcagatcgagctggacagcgaggatgtgaagatgagagcg
aagcagctgctggtggcctggcaggatcaggagggcgctcatgccacccctgagaacctg
atcacagcgctgaccaaagctgggctcggggacctggccgaaagtctcaccaacgacacc
gaaggcagtagctaa
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integrated database retrieval system
