Cyanistes caeruleus (blue tit): 111926738
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Entry
111926738 CDS
T05602
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111926738 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccae03000
]
111926738 (ARID1B)
03021 Transcription machinery [BR:
ccae03021
]
111926738 (ARID1B)
03036 Chromosome and associated proteins [BR:
ccae03036
]
111926738 (ARID1B)
Transcription factors [BR:
ccae03000
]
Eukaryotic type
Helix-turn-helix
ARID
111926738 (ARID1B)
Transcription machinery [BR:
ccae03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111926738 (ARID1B)
Chromosome and associated proteins [BR:
ccae03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111926738 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
111926738
NCBI-ProteinID:
XP_023779182
LinkDB
All DBs
Position
3
AA seq
1817 aa
AA seq
DB search
MYHSPAVSLTILTFFFACLKYCFACVCQQGSPMDPMVMKRPQLYGMGNNPHSQAQQSSPY
PGQSYGPPGPQRYPVGMQGRAPAAMGGMQYPQQQIPPQYGQQGVSGYCQQGQQPYYNQQP
QPQHLPPQAQYLSQAQQRYQAQQDMSQEGYGTRSQPPMAPGKPNHEDLNLIQQERPSSLP
VEVLASEDATFGHKDLSGSIDDLPTGTEATLSSAVSASGSTSSQGEQSNPAQSPFSPHAS
PHLSGIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHPALSQSP
MPQDRGFMAGIQRNPQMSQYGPQQTGPSMSPHPSPGGQVHPGIGSFQQSNSSGTYGPQMS
QYGPQGNYSRPPTYSGVPNTSYSGPGPGMGINANSQMHGQGPSQPCGTMPLGRMPSAGMQ
SRPFPGNMSSMTPNSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGNFP
AMNQSGIMGSSSPYTQPMNNSSGLMNPQAPPYSMAPNMVNSSTGNAPMGLADMMTPGESK
LPLPLKADGKEEGAPQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFHGDES
DSISSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPERKMWVDRYLTFMEERGTPVASL
PAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATTLNVGTSSSAASSLKKQYIQYLF
AFECKIERGEEPPPEVFSTGDTKKQPKIQPPSPANSGSLQGPQTPQSTGSNSMTEVPGDL
KPPTPASTPHGQMTPMQGGRNSAVSVHDPFSDVSDSAFPKRNSMTPNAPYQQGINMPDMM
GRMPYEPNKDPFGGMRKVPGSNEPFMTPGQMPNSGIQDMYNQSPSGAMSNMSMSQRQQFS
YGSGYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGMYPQQQNYKRHMDGMYGPPAKRHEGD
MYNMQYGNQQQEMYNQYGNAYTGPDRRPMQGQYPYPYNRERMQGPGQMQQHGIPPQMIGG
PMQSSSSSEGPQQNMWPTRNDMPYPYQNRQGPGGPAQAPPYPGMNRTDDMMVPDQRINHE
SQWPSHVNQRQPSYMSSSASMQPITRPPQSSYQTPPSMPNHISRAPSPASFQRSLENRMS
PSKSPFLPSMKMQKVIPTVPVSQVTGPPPQPPPIRREITFPPGSVEASQPVLKPRRKITS
KDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFR
KCLIDIFGILMEYEVGDPGHKALDHKAAKKDDSQSLAEDTGKDENDECIDYFDEDEEEGE
DEKVEGEEKSIVFSTPGAIADPSERPKQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQEF
DSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRKAPPPLNSPSKKKDLEGKGESEEQQEKS
ITATIDDVLSARPGALPEDSNSGSQTESSKFPFGIHQAKSHRNIKLLEDEPRSRDETPLC
TITHWQDSLAKRCICVSNIVRSLSFVPGNDTEMSKHPGLVLILGKLILLHHEHPERKRAP
QTYEKEEEEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDGL
LHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKLY
ATLVRYVGDRKNPVCREMSMALLSNLAQGDTLAARAIAVQKGSIGNLISFLEDGVTMAQY
QQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLN
SLVASVICDVLFQIGQL
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atgtatcattcgcccgcagtgagcctgacgattctgacctttttcttcgcatgtcttaaa
tattgctttgcttgtgtttgccaacagggcagtccgatggatccgatggtgatgaagagg
ccgcagctgtacggcatgggcaataaccctcactctcaggcacagcagagcagcccctac
cccgggcagtcctacggccctcccggcccccagcgctatcccgtgggaatgcagggccga
gccccggcagccatgggaggaatgcagtatccacagcaacagatcccacctcagtatggt
cagcaaggtgtaagtggctactgccagcagggccagcagccgtactacaaccagcagccg
cagccccagcacctgccgccccaggcacagtatctgtcgcaggcccagcagaggtaccag
gctcagcaggacatgtctcaggaaggctatggaaccagatctcaaccccctatggcccca
ggaaagcctaaccatgaagacttgaatctaatccagcaagaaagaccatcaagcttacca
gttgaagtcttggcctccgaggatgctacatttggacacaaggatttatctggatccatt
gacgacttgccgactggaactgaagcaaccctcagctcagctgttagcgcgtcaggctct
acgagcagccaaggggagcagagcaaccctgcacagtctccgttttcccctcatgcttct
ccacatctctctggcatccctgggggcccatcaccttcccctgtaggctcacccgttgga
agcaaccagtcaagatctggtcccatttctccagcgagtattccaggcagtcagatgcca
ccgcagcctcctggcagccagtcagaatccagctcccaccctgccttgagccagtcacca
atgccacaggaccgaggttttatggcaggcatacagaggaacccccaaatgtcacagtat
ggacctcaacaaactggaccttccatgtcaccacacccctcacctggaggtcaagtgcat
cctggaattggtagctttcagcagagtaattcaagtggtacttatgggccccagatgagc
cagtatggaccacaaggaaactactccagaccaccgacgtacagcggtgtgcccaacaca
agttacagtggcccaggccccggcatgggtataaatgccaacagtcagatgcatggacag
gggccaagccagccttgtggtaccatgcccctgggacggatgccatcagctgggatgcag
agcagaccatttcctggaaacatgagcagtatgacccccaattctcctggcatgtctcag
cagggaggccctgggatgggcccacccatgccaactgtgaatcgcaaggcacaggaggcg
gctgctgcagtgatgcaggctgctgcaaactccgctcagagcaggcaaggcaattttcct
gccatgaatcagagcggcattatgggatccagctccccctacactcagccgatgaacaac
agctctggtctgatgaacccacaggctcctccttacagcatggcacccaacatggtgaac
agctcaacaggtaatgcacctatgggtcttgcagatatgatgacacctggtgagtccaaa
cttccccttcctctcaaagcagatggcaaagaagaaggagccccccagcccgagagcaag
tcaaaggatagctacagctctcagggtatttctcagcccccaaccccaggcaacctgcca
gtcccttccccaatgtccccaagctctgctagcatctcctcatttcatggagatgaaagt
gatagcattagcagcccaggctggccaaagactccatcaagccctaaatcaagttcctct
accacaactggagagaagatcactaaagtctatgagctaggaaatgagccggagcgcaag
atgtgggtggatcggtacctgacattcatggaggagaggggcacacctgtggccagtctg
ccagctgtgggcaagaagcccttggacctgttcaggctctatgtctgcgtcaaagagatt
ggaggtttagcacaggttaataaaaacaagaagtggcgtgagctggcaaccaccttgaac
gttggcacttcgagcagcgcagccagctccctgaaaaaacaatacattcagtacctgttt
gccttcgagtgcaagattgagcgaggggaggagccccctccagaagtcttcagcactgga
gataccaagaaacaacctaagattcagccgccatctcctgctaattctggttccctgcaa
ggcccacagacaccacagtccactggtagtaattccatgacagaagtgccaggcgatttg
aagcccccaacaccagcatccacacctcatggacagatgacacctatgcagggtggcagg
aacagcgcagtcagtgtgcatgatcccttttctgatgtaagtgattcagcgttcccaaag
cgaaactccatgacgccaaatgcaccataccagcagggaataaacatgccagatatgatg
ggaaggatgccatatgagccgaataaagatcctttcggtggaatgagaaaagtgcctgga
agcaatgagcctttcatgacccctggacaaatgcctaacagtggaatacaagatatgtat
aaccagagtccatctggagcaatgtccaacatgagcatgagccagcgacagcagttctct
tatggaagtggctatgacaggaggcatgaaccatatgggcagcagtatccaggacaagga
cctccctcaggacagccaccatatggaggacatcaacctggaatgtatccacagcagcag
aactacaagagacacatggatggcatgtatgggcctccagccaaacgccacgaaggggat
atgtacaacatgcagtacggcaaccagcagcaggaaatgtataaccagtacggcaacgct
tacacagggcctgacaggaggcccatgcagggacagtacccatatccatataacagggag
aggatgcagggcccaggacaaatgcagcagcatggaatacctccccagatgattggtggc
cccatgcagtcgtcatcctccagtgaaggtcctcagcagaacatgtggccaacacgaaat
gatatgccttacccttaccagaacaggcaaggtccaggaggccccgcacaggcccctccg
tatccagggatgaatcgcactgatgatatgatggtacctgaccagaggataaaccatgag
agtcagtggccttctcatgtcaaccaacggcagccttcttatatgtcatcctcagcctcc
atgcagcctatcactagacctcctcagtcatcctaccagacaccaccctctatgccaaac
cacatctccagagctccaagtccagcatccttccagcgctctttggaaaaccgtatgtct
ccaagcaagtctcctttcctaccctccatgaagatgcaaaaggttatacccacagttcca
gtgtcacaggtcacaggacctccaccccaaccaccaccgattaggcgagagattaccttc
cccccaggctctgtagaagcatcccaaccagtcttaaaaccaagacgaaagattacctca
aaagatattgtaactcctgaggcctggagagtgatgatgtctcttaaatctggtcttttg
gctgaaagtacctgggcgctagacactattaatattcttctgtatgatgacagcactgtt
gctactttcaacctctctcagttgtctggatttcttgagcttttagtagaatattttaga
aaatgcctgattgacatttttggaatccttatggaatatgaagtgggagatccaggccac
aaagcacttgatcacaaagcagccaagaaagatgatagtcagtccttggcagaggatact
ggaaaagatgagaatgacgaatgtattgactattttgatgaagatgaggaggagggggag
gatgaaaaggtagaaggagaagaaaagagcattgttttttctactcctggtgccattgct
gatccaagtgagaggccaaaacaagccagtaaatttgacaagctgccaataaagattgta
aagaaaaataatctatttgttgttgaccgttctgacaaacttggacgtgttcaggaattt
gatagtggacttctccactggcagcttggtggtggtgacacaactgagcatatccagact
cactttgaaagcaagatggagattccaccacgcaggaaagcccctcctcccttgaactct
ccaagcaaaaagaaggatcttgaggggaaaggtgaatctgaggagcaacaagaaaagagt
ataacggcaaccattgatgatgtcctctcagctcggccaggagcattacctgaagactca
aactctggttcccaaacagagagcagtaaatttcctttcgggatccatcaagccaaaagc
caccggaatattaaactgctagaggatgagccaaggagccgggatgagactcctctatgc
accataactcactggcaagactccttggccaaacgctgcatctgtgtgtcaaatatcgtc
cgtagcttgtcttttgtgcctggcaacgacaccgaaatgtccaaacatccaggcttggtg
ctgatcctgggaaagttgatccttcttcaccatgagcatccagaaagaaagcgagcgccg
cagacttatgagaaggaggaagaagaggacaaaggggtggcctgcagcaaggatgagtgg
tggtgggactgcctcgaggttttgagggataatacattggtcacattagccaacatttct
gggcagctagacttgtctgcttacacagaaagcatctgtttgccaattttggatggcttg
ctgcactggatggtgtgcccgtctgcagaggcacaggatccttttccaaccgtggggccc
aactcagttctttcgcctcagagacttgtgctggagaccctgtgtaagctcagtatccag
gacaataatgtggaccttatcttggccacccccccattcagccgtcaggagaaactctac
gctactttagttaggtacgttggggaccgcaaaaacccggtctgccgagaaatgtccatg
gcgctcctatcgaaccttgcccagggggacacattagcagcaagggcaatagctgtgcag
aagggaagcattggaaacttgataagcttcctggaggatggggtcactatggcccagtac
cagcagagccagcataacctcatgcacatgcagcctccgcctctggagccgcctagcgta
gacatgatgtgcagggcagccaaggccttgctggccatggcgagagtggacgagaaccgc
tccgagttccttttgcacgagggtcgtttgctggatatctcaatatctgctgtcctgaac
tctctggttgcatctgtcatctgtgatgtactttttcagattgggcagttatga
DBGET
integrated database retrieval system
