Cyanistes caeruleus (blue tit): 111930847
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Entry
111930847 CDS
T05602
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccae01002
]
111930847 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccae04121
]
111930847 (USP47)
Enzymes [BR:
ccae01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111930847 (USP47)
Peptidases and inhibitors [BR:
ccae01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111930847 (USP47)
Ubiquitin system [BR:
ccae04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111930847 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
ubiquitin
Ubiquitin_2
Sad1_UNC
Motif
Other DBs
NCBI-GeneID:
111930847
NCBI-ProteinID:
XP_023784879
LinkDB
All DBs
Position
5
AA seq
1363 aa
AA seq
DB search
MFWSCRQSIFAEMKKKFSQAECAAEEPRVLCIIQDTTNSKTVNERVTLNLPASTPLRRLF
EDVAAKVGYVNGSFHLVWGNGDGVTATTPIDQNSDKTILDAGFEPGKKNFLHLTDKDGEQ
PHVMQEESGAAEDGAQERFIGPLPREGSMGCSNDYVSQTYSYSSVLSKSETGYVGLVNQA
MTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPERSIPYQLQRLFVLLQTSKKRAIETT
DVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLEC
GYEGWRIDTYLDIPLVIRPYGCSQAFASVEEALHAFIQPEILDGPNQYFCERCKKKCDAR
KGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSVFIDVEDEKSPQTESC
TDSGAENEGSCHSDQMSNDFSNDDGVDEGICLESNSAAERISKAGSEKSSLLYELFSVMV
HSGSAAGGHYYACIKSFSDDQWYSFNDQHVSKITQEDIKKTYGGSSGSRGYYSSAFASST
NAYMLIYRLKDPTRNAKFLEAHEYPEHIKQLVQKERELEEQEKRQREIERNTCKIKLFCM
HPTKQITMENKLEVHKDRTLREAVEIAYKLMDLEEAVPLDCCRLVKYDEFHDYLERSYEG
EEDTPMGLLLGGVKSTYMFDLLLETRRPDQVFQCYKPGEVMVKVHVVDLKAESVAPPISV
RAYLNQTVSEFKQLISKATHLPADTMRVVLERCYNDLRLLNVASKTLKAEGFFRSNKVFI
ESSESLDRHVPYTDSQLWKLLDRHANTIRLYVALPEQAPASQLRRALHQKSAAAAANSDE
PCERVKGPVGNMKSVEAILEESTEKLKSLSLQQQQQQEGDNGDSSKSTEASDFENIESPL
NEIDSSASAENRELDNQIQISDAENLQSEERSDSDVNNDRSTSSVDSDILSSSHSSDTLC
NVDNAPLPLANGLDSHSITSSRRSKANQGKKETWDTAEEDSGTDSEYDESGKSRGEAQYM
YFKSEPYTAEEGSGEGQKWLMVHVDKRITLSAFKQHLEPFVGVPSSLFKVFRVYASNQEF
ESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEPEPCKFLLDAVFAKGMTV
RQSKEELLPQLREQCGLDLTIDRFRLRKKTWKNPGTVFLDYHIYEEDINISSNWEVFLEI
LDGVEKMKSMSQLAVLSRRWRPSEMKLDSFQEVVLESSSVEELKEKLSEISGIPLENIEF
AKGRGTFPCDISILEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDKTEELMELTDEQR
NELMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atgttttggagttgcagacagagtatctttgctgaaatgaagaagaaattttcacaggcg
gagtgtgctgcggaggagccgcgggtgctgtgtataatccaggacaccaccaactccaag
acggtgaacgagcgtgtcacgctcaacctgccggcctccacgccactcaggaggctcttc
gaggacgtggctgccaaagtgggctacgtgaacggctccttccatctggtgtggggcaac
ggggacggcgtcacggccacgactccaatagatcagaacagtgacaaaaccattcttgat
gctggttttgagccagggaagaagaactttctgcatttgacagacaaggatggtgagcag
cctcacgtaatgcaggaggagtcgggggctgcggaggatggagcacaggagagattcata
ggcccccttcccagagaaggctccatgggatgtagcaatgactatgtcagtcaaacctat
tcttattcttcagtcctgagcaagtcagagacaggttatgtggggctggtaaatcaagca
atgacttgctacttgaacagccttctgcaaacacttttcatgactcctgaatttagaaat
gcattgtataagtgggaatttgaggaatctgaagaggatcctgagaggagtatcccctac
cagctgcaaagactgtttgttttacttcagaccagcaaaaaaagggcaattgaaacaaca
gacgttacacggagttttgggtgggacagtagtgaagcgtggcagcagcatgatgtgcag
gagctttgtagagtcatgtttgatgctttggaacagaaatggaagcaaacggagcaggct
gatcttataaatcaactgtaccaaggcaaactgaaggactatgtgaggtgcctggagtgt
ggctatgaaggctggagaatcgacacgtacctggatatccctctggtcatccgaccctat
ggctgcagccaggcgtttgctagcgtggaagaagcactgcatgctttcattcagcctgag
atccttgatggcccaaatcagtacttttgtgagcgatgtaagaagaaatgtgatgcgagg
aagggtctgcggttcttgcactttccgtacctgctgacgttacagctgaagagatttgac
tttgattacaccacaatgcacagaattaaactcaatgatcgcatgactttcccagaggag
ctggacatgagtgtctttattgatgtggaagatgagaaatctcctcagacggagagttgc
actgatagtggagctgaaaatgaaggcagttgtcacagtgatcagatgagcaatgatttt
tctaacgatgatggagttgatgaaggaatctgccttgaaagcaatagtgcagcagagagg
atctctaaagctggcagtgaaaagagttctttactgtatgagctcttttctgtcatggtt
cattctggaagtgctgctggtggccattattatgcctgtataaaatcttttagtgatgat
cagtggtacagctttaatgatcagcatgttagcaagataactcaggaagatattaagaaa
acatatggaggatcttctggaagcagaggctattattccagtgcttttgctagctccaca
aatgcttacatgctgatatacagactgaaagacccaacaagaaatgcaaagtttcttgag
gcacatgaatatccagagcacattaaacaattggtacagaaagagagagaattagaagaa
caagaaaagaggcaacgtgaaattgaacgcaacacgtgcaagattaaattattctgcatg
catcctacaaagcaaataacgatggagaacaaactggaagttcataaggacagaacactg
agggaagctgtggaaatagcttacaagttaatggatttggaggaggctgttcccctggac
tgctgccgcctcgtcaaatacgatgagttccacgactacctggagcgctcgtacgaggga
gaggaggataccccaatgggcttgttactgggaggggtcaagtcaacctacatgtttgac
ttactgctggaaacaagaaggcctgaccaagttttccagtgctataaacctggtgaggtc
atggtaaaggttcacgtagtcgacctgaaggctgaatctgttgctcctccaataagtgta
cgagcttatttgaatcagacagtttcagagtttaaacagctaatttcaaaggccacgcac
ctgcccgctgacaccatgcgggtggtgttggagcgctgctacaatgacctgcgcctgctg
aacgtggccagcaagactctgaaagctgaaggcttctttagaagcaacaaggtgttcatc
gagagctcggagtccctggaccgtcacgtgccgtacaccgactcgcagctctggaagctc
ctggaccgccacgcaaacaccatcagactgtacgttgcgctgccagagcaggctcctgcc
tctcagctcaggcgggcgctccaccagaaatccgctgcggcggcagccaactctgatgag
ccttgtgaaagagtaaaaggacctgtaggtaatatgaaatctgtagaggcaattttggaa
gaaagcactgaaaaacttaaaagcttgtccctgcagcaacagcagcagcaggagggagat
aacggagacagcagcaaaagcacagaagccagtgattttgaaaacattgaatcaccttta
aatgaaatagactcttcagcatcagcagaaaacagagaactcgacaaccaaattcagatt
tctgatgcagagaatctgcagtcggaggagcgctcggactcggacgtcaataacgacagg
agcacgagttcggtggacagtgacatcctcagctccagccacagcagtgacactctgtgc
aacgtggacaatgcccccctccccctggccaacggcctggattcccacagcatcacgagt
agcaggcgatccaaagccaaccagggcaagaaggaaacctgggacacggcagaggaggat
tctggaacagacagtgaatatgacgagagtggcaagagcagaggagaggcacagtatatg
tactttaaatcagagccctacactgcagaggagggttcaggagaagggcagaaatggctg
atggtgcatgttgacaaaagaattacactgtctgccttcaaacagcacttggagcctttt
gttggagttccatcttccctcttcaaagtctttcgagtctatgccagcaaccaagagttt
gagagtgttcggctgaatgagaccctttcatcattttctgatgacaataagataactatt
agacttggaagagctcttaagaagggtgaatacagagttaaagtctatcagctcttggta
aatgagcctgagccatgcaagtttctcctagatgcagtttttgctaaaggaatgactgtc
cgacagtccaaagaggagctgcttcctcagcttcgagagcaatgtggcctagatttgaca
attgacaggtttcgcctacgaaagaaaacctggaagaatccaggcactgtgtttctggat
tatcatatctatgaagaagatatcaatatttccagcaactgggaagtcttcttagaaata
cttgatggagtagaaaagatgaaatccatgtcacaacttgctgttttatcgagacgatgg
aggccgtcagagatgaaattagattctttccaggaagttgtactagaaagcagcagtgtg
gaagaattaaaagagaagctaagtgaaataagtggaatacccttagaaaacattgaattt
gcaaagggtagaggaacctttccatgtgacatttccatactagagattcatcaagacttg
gactggaatccaaaagtatctacattgaatgtctggcccctgtacatttgtgatgatggt
gcagtaatattttatagggataaaactgaagaattaatggaattaacagatgagcaaaga
aatgaactgatgaaaaaagaaagcagcagactgcagaaaactggacaccgggtaacctac
tctccccgtaaagaaaaagcactaaaaatttatctggatggagcaccaaataaagatttg
actcaagactga
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integrated database retrieval system
