Cyanistes caeruleus (blue tit): 111935597
Help
Entry
111935597 CDS
T05602
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111935597 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccae03041
]
111935597 (DDX46)
Enzymes [BR:
ccae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111935597 (DDX46)
Spliceosome [BR:
ccae03041
]
Complex A
U2 snRNP components
U2 related factors
111935597 (DDX46)
Complex B
111935597 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
111935597
NCBI-ProteinID:
XP_023791828
LinkDB
All DBs
Position
13
AA seq
1043 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRKREDRRSRSRDRDRRRERSRSRDKRRSRS
RDRKRQRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSSSPSKNRKTENRSRSKEK
TEGVEVSKEKKKDKDDKEEEKDKDATTNAVATENFDQNKLEEEMRKRKERVEKWREEQRK
KAMENIGELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEGNEVEDEELDPLDAYMEEVK
EEVKKFNMRSVKGGGGSEKKTGPTVTKVVTVVTTKKAAAESEKKKGELMENDQDAMEYSS
EEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTQEEVNVYRLE
LEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQTQAIPAIMNGRDLIGIA
KTGSGKTIAFLLPMFRHIMDQRALEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRV
VCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFD
MGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQH
VIVIEEENKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQY
DRDSIINDFKNGTCKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNK
GYAYTFITEDQARYAGDIIKALELSGNPIPTDLEKLWADFKDQQKAEGKLIKKSSGFSGK
GFKFDETEQALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVKDMAAPGTS
NAPTPSAGNAEKLEIAKRLALRINAQKNLGAEAQVMVPFHFKDVMQQATNAILRGGTIQA
PTVSAKTIAEQLAEKINAKLNYVPIEKQEEEKQDGGQNESFKRYEEELEINDFPQTARWK
VTSKEALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRL
IKEELIRLQNSYQPTNKGRYKVL
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcgagtccaggcattatcggaagcgctctgcatcccggggccgctctgggagc
cgttccaggagtcgttccccatcagacaagaggaaacgtgaggacaggcgctccaggagc
cgggatcgggatcgcagacgggagaggtcacgcagcagggacaagagaaggtctcgctca
cgggacagaaagcgtcaaagacgttcaaggagtagagaaagggaacggagccgagagaga
agacgatcccggagccgagagaggaggcgttccaggagcaggagtagagggagacggtct
cgatcctccagtccaagcaagaacaggaaaacagaaaacagatcaagatctaaagaaaag
acagaaggtgtggaggtttccaaagaaaagaaaaaagacaaagatgacaaagaggaagag
aaggataaagatgctactacaaatgctgtggccactgagaattttgatcagaacaaacta
gaagaagaaatgagaaaacgaaaagaaagagtggagaaatggagggaggaacaacgcaag
aaggcaatggaaaacataggagagctaaaaaaagaaattgaagagatgaaacaggggaaa
aaatggagtttagaagatgatgatgatgatgaagaggaaactgcagaaggagaaaaagaa
ggcaatgaggttgaagatgaggagttagatcctttagatgcttatatggaagaagtaaaa
gaagaggtcaagaagttcaatatgagaagtgtgaaaggtggaggtgggagtgaaaagaaa
actggaccaactgttaccaaggtggtaactgtggtgacaaccaaaaaggcagctgctgag
tcagaaaagaagaaaggggaactcatggagaatgaccaagatgcaatggagtattcctca
gaagaggaggaagttgatcttcagactgccctgactggctatcagaccaagcagagaaag
ctgctagaaccagtggatcatggaaagatagaatatgaacctttcaggaaaaacttctat
gttgaagtaccagaactagctaaaatgactcaagaagaggtaaatgtgtacaggctggag
ctggagggaattacagtcaagggaaaaggctgccccaaaccaataaaaacctgggtacaa
tgtggcatttccatgaagattctcactgccctcaaaaaacatggttatgaaaagcctact
ccgattcaaacccaggctatcccagcaattatgaatggacgggatttgattggcattgcc
aaaacaggaagtggcaaaactattgcatttcttttgccaatgttcagacacatcatggat
cagagagcattagaagaaggagaaggtcccatagctgtcattatgacacctacgcgtgag
ttggctttgcagattaccaaggagtgcaagaaattctcaaagacacttgggcttcgagtt
gtctgtgtttatggaggaacaggaatcagtgaacagatagctgaactcaaaagaggtgct
gaaattattgtttgcacacctggacgtatgattgacatgttagcagctaacaatggtcgg
gtgacaaacctccgtagagtcacttacgttgtacttgatgaagctgacaggatgtttgac
atggggtttgagcctcaggttatgcgcattgtagacaacgtcaggcctgaccgtcagact
gtcatgttctctgctacttttcccagagctatggaggccctggctcgcaggatcctcagt
aaacctatagaggtgcaggttggaggcagaagtgttgtctgttctgatgtggagcaacat
gtgattgtcatagaagaggagaacaagtttctgaagttactggagctactgggacattat
caggagaaaggatccgttatcatatttgtagataagcaagaacatgctgatgggctgttg
aaagatttaatgagggcctcttatccttgtttgtctcttcatggaggtattgatcagtat
gacagggacagcatcatcaatgacttcaagaatggaacctgcaaacttctggtggccacg
tctgtagcagcgaggggcttggatgtgaagcagctgatgctggtggtcaattacagctgt
cccaaccattatgaggactatgtgcaccgagcaggccgcactgggcgagctggcaataag
ggatatgcatatacattcattactgaggatcaggcacgttatgctggtgatatcattaag
gctttggaattgtctgggaatccaattcctactgatttggagaagctctgggctgacttc
aaagaccaacagaaggctgagggaaaattgattaaaaaaagcagtggattctctggcaaa
ggttttaaatttgatgaaacagaacaggctttggctaatgaaagaaagaagctacaaaaa
gcagctcttggcttgcaagattcagatgatgaagatacagctgttgatattgatgaacaa
attgaaagcatgttcaattcaaagaaaagagtaaaagacatggcagcgccaggaacatca
aatgctcctacaccatcagctgggaatgcagaaaaattggaaattgctaaaagattggcc
ttgagaatcaatgcccagaagaaccttggagcagaggcacaagtcatggttcccttccac
tttaaggatgtgatgcagcaggctacaaatgctatcctgagaggaggcacaattcaagct
cctactgtgtctgccaagaccattgcagagcaactggctgaaaaaatcaatgccaagctc
aattatgtacccatagagaaacaggaggaagagaaacaggatggaggacagaatgaatcc
ttcaagagatatgaagaagagttagagatcaatgacttcccacagactgccagatggaaa
gttacctccaaggaagcactgcagagaatcagtgaatattctgaagctgccattacaatc
aggggaacttacttccctccaggcaaagaacccaaggaaggagaacgaaagatttatttg
gctatagaaagtgccaatgaactggctgtacagaaagcaaaggcagaaatcacacgactt
ataaaagaggagctcatcagattgcaaaattcttaccaacctaccaacaaaggaagatac
aaagttctatga
DBGET
integrated database retrieval system
