Cyanistes caeruleus (blue tit): 111938354
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Entry
111938354 CDS
T05602
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccae03036
]
111938354 (CHD6)
Chromosome and associated proteins [BR:
ccae03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
111938354 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
BRK
ResIII
DEAD
CHDCT2
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
111938354
NCBI-ProteinID:
XP_023795803
LinkDB
All DBs
Position
20
AA seq
2728 aa
AA seq
DB search
MIMKIQKKEKQPPSLKALSLSPMSSAWDCKTQDTFASSEEQDEVPHQVTVTATNTGGQCQ
CPKEEPNGAPQKRTNTQNGMQDNGGTGVKKKRKKKDLGEQEGGDKAAVEVKPKRRREPKE
PKEPKKVKECKKLKEPKQREVAKKPRKPREPKAPKEPKDKKSGSEPAPRSRPKKSSKDTP
VEKKKKGKRKNEIPVNSLDLDQDLLSPSVQSPEESAESADSQKRRSGRQVKRRKYNEDLD
FKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASRMVQKEAHPGGL
AFETEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPDEDLFN
PDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEFEALQI
PPEIKHMVTYPEERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILAD
EMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISR
QMIQQYEMVYRDAQGNPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNR
NCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTEE
QVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGA
NQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHCPEAPDFQLQAMIQAAGKLV
LIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFC
KPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYR
LITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGAYGALMD
EEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKW
AKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRSRRFN
EKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCVKHYK
GDEKIKSFIWDLITPTKDGQNQALQNHSGSLSAPVPRGRKGKKTKNQMLLPEIKNADWLA
TCNPEVVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAADKAFEGTPARELDVLLP
DIDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLSAEQG
VSDGAQDAAERGSVEKEESSGEKLEGLSKQEDIVASGVGEASEKRDEPAAAQDGSDSDRS
CWPVSSALTARLRRLVTVYQRCNRKEVPPRTEMLVPGNHGYWLQDEMFRRASEMDSVNKE
IQKRWTRREQADFYRTVSSFGVIYDQEKKIFDWAQFRAISRLEKKTDESLEKYFYSFVAM
CKNVCGLPLWKEDGPPDPDIYVEPITEERAARTLYRIELLRKVREQVLKCPQLHERLKLC
RPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRTGIPG
PETLCCLYQSNSELYSSPVYSQMDQTCETLENEAESHIKLETVDSTMSQAGGSPLDTNCE
TFMSEVRDIISSNYDESSLPDSLVCMMYDEKACPSEQSSLARDSPSCTDVGSSVAKLSEG
KLEGDEDPSSCDADAMREAPFLEGLQVGSDQMDSQNEEAEASPSTPESNPSQSASTKLSK
GLEQKGALASPSAGLPEHDTMERVLSVGLYSPSLHNYELKAPPEQRFISLLQEKGLEAKL
GPSQSHSEEDEEDEEDDDNSEAAADAVEGLNRPRTRADCDPEAHELGGEEQSSGLPTPEN
TCPEDINGERESPRAEGREDCGLNEESTQQHSPGQAQSQPFSLPTPLLQGEPRRAEPPCV
MGEPFSQDAEGQTGCTETPHPEPQGINQEECENRDDEEKASSNQSQDGPEKYLEEENKNS
ASVLPGEIDDLQDARAPTIAQLLQEKTLYSFSEWPKDRVIINRIDNICHAILKGKWPSSS
QQFEAQSLLTTPAMASNTGSRSSFTESESPDPSFNSGVLMSRVQKEGFLSPAFAKDERKH
RRPYEFEMERDAKQRSLEQLAAAHVHPPIVLNGWHEAAVDLSRASDGSQGNSSPFPLNTN
MPKLGTMSALQSSLGMDLSGILQAGLIHPVTGQIVNGSLRRDDAAMRRRRGRRKNVEGMD
LIFLKERTLPNRLQDVQDDQPQPPQNSPLPDGSVAATSTPQPVPAAGSQEKAVPNKSLLD
WLRQQSDYTLDVPSFGTNFSDKPKQRRQRCKDPNKLDISSLTGEERVPVVHKGTGRRLGG
ATAPALKELPRWLDANLEYAVAADWADIVKLSGYLPENKFNRILTEPVLRDAGPRRRGRR
PRSELLKGPGVVADSSSGMGPLFMNGLIAGMDLVGLQNMRNMQGIPLTGLVGFPAGFAAV
PAGEDVKSTLSMLPMMLPGMATVPQMFGVGGLLNSPMTTTCTATAPTSLTSTTKGGTASA
EKANEEKQGSQDGKKEPLAEDKPGPSSFSNQTESAITTSSPVAFNPFLIPGMSPGLIYPS
MFLSPGIGMALPGIQQTRHSEVANLESQKRKRKKAKGELANPEPETVSLPEKEDANSQNC
VEQSPPAAAEKEQDGPAEKERQAAHNTD
NT seq
8187 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatacagaaaaaagaaaagcagccaccaagcttaaaagcactgagcctc
tccccaatgtcgtctgcctgggactgcaagactcaggacacctttgccagcagtgaagag
caggacgaggtgccccaccaggtgacagtgacagccacaaacacaggtggccagtgccag
tgcccgaaggaggagcccaatggggctccccagaagcggacaaacacccagaacgggatg
caggacaatgggggcacgggggtgaagaagaaacggaagaaaaaggatctgggagagcag
gaagggggagataaagcagctgtggaggtgaaaccaaagaggaggagagaacctaaagaa
ccaaaagagcctaaaaaggtgaaggagtgtaagaagttgaaggagcccaagcagagggag
gtggctaagaagccccggaagcctcgggaacccaaagccccgaaggagcctaaagacaag
aagagtggctctgagccagcccctagatcaagacccaagaagagcagcaaagacacccct
gtggagaagaagaagaaagggaagaggaaaaatgagataccagtgaacagtttggatttg
gatcaggatctcctgagcccatctgtacagagcccagaggagtctgcagaatcagctgac
agccagaaacgacgctcaggacggcaggtgaagaggaggaagtacaacgaggacctggat
ttcaaggttgtggatgatgacggcgagacaattgctgtgctgggagctgggcgaacctcc
gcgctctctgcctctactctggcatggcaggcagaggagcctcccgaggatgatgccaat
atcattgagaagatccttgcctccaggatggtgcagaaggaggctcatcctggaggcctg
gcatttgagacagaggagttctacgtcaaatacaggaacttctcttacctccactgtaaa
tgggcaacgctggaggaactggagaaggaccccaggatctcgcagaagataaaacgcttc
cggaacaagcaggctcagatgaaacatatttttacagagcctgatgaggatttgttcaac
ccggactatgtggaggtagatcgaattttggaggtggctcacacgaaggaccctgacact
ggggaggaggtaactcactacttggtgaagtggtgctcactgccctatgaggagagcacc
tgggagctggaggaggatgttgacccagggaagattaaggagtttgaagccctccaaatc
cctccagaaatcaagcacatggtaacgtaccctgaggagcgcccagcgtctgagtcctgg
cagaagctggagaagtcccgggagtacaagaacagcaaccagctacgggagtatcagctg
gagggaatgaactggctgctctttaactggtataacaggaagaactgcatcttggctgac
gagatggggttggggaagacaatccagtcaatcactttcctctcagagatattcctgatg
ggcatccatggccccttcctcatcatcgcacctctctccaccatcacaaactgggagagg
gagttccgcacgtggacagagatgaacgccatcgtgtaccacggcagccagatcagccgg
cagatgatccagcagtacgagatggtgtacagggacgcacagggtaaccctctccctggg
atcttcaagttccaggtggttatcaccacctttgagatgatccttgccgactgcccagag
ctgaagaagattcagtggcgctgtgtggtcattgatgaggcacatcgcctgaagaacagg
aactgcaaactcctggaggggctgaagctcatggccctggagcacaaggtgctgctgaca
gggacccccctgcagaactcggtggaggagctcttcagcctcctaaattttctggagcca
cagcagttcccctcagagacagccttcctggaagagtttggagacctgaagacagaggag
caggtgaagaagctgcagtccatcctgaagcccatgatgctgcgacggctgaaggatgat
gttgagaagaatctggcacccaagcaggagaccatcattgaggtggagctgaccaatatc
cagaagaaatactatcgggccatcctggagaagaatttctccttcctctccaagggtgcc
aaccagcacaatatgcccaacctcatcaataccatgatggagctgcgcaagtgctgcaat
cacccgtacctcatcaatggggcagaggagaagatcctggaagacttccgtaaaacacac
tgcccagaggcaccggacttccagctgcaggcgatgatccaggcagctgggaagctggtg
ctcattgataagctgcttcccaagctgatcgctggtgggcacaaggtgctcatcttctca
cagatggtgcgctgccttgacatcctggaagactatctcatccagagacggtacacctat
gagcgtatcgatgggcgggtgcgcggcaacctgcgccaggctgccatcgaccgcttctgc
aagccagactcggatcgctttgtctttctcctgtgcacacgggcaggcgggctgggcatc
aacctgactgctgctgacacctgcatcatctttgattccgactggaacccacagaatgac
ctgcaggctcaagctcgctgccaccggattgggcaaagcaaggccgtgaaggtctatcgc
ctcatcaccaggaactcctatgagcgggaaatgtttgacaaggccagcctgaagctgggc
ctggataaagctgtgctgcaggacatcaaccgcaagggcagcaccaatggggttcagcag
ctctccaagatggaggtggaggacctgctgcggaagggtgcttatggcgcgctcatggat
gaggaggacgaggggtccaagttctgtgaggaagacattgatcagatcctccagcgcagg
acacagactatcacgatccagtctgaagggaagggctccacatttgcaaaggccagcttt
gtagcatcaggaaacagaactgacatttctttagatgaccccaacttctggcagaagtgg
gccaagatagcagagcttgatacagatgccaagaatgaaaaggagagcctggtcatcgac
agaccccgggtgaggaagcaaaccaaacactacaactcctttgaggaggatgagctgatg
gagttctccgagctggacagtgactcagatgagcgacccacacgctcacggcgctttaac
gagaagacacgacggtacctgagggctgagtgctttcgtgtggagaagaacctgctcata
tttggctggggacgctggaaagatatcctgacccatggacggttcaagtggcacctgaat
gagaaggacatggagatgatttgtcgggccttgctggtgtattgtgtcaaacactacaag
ggggatgagaagattaagagttttatctgggatctcatcacgccaacgaaggatggccag
aatcaggctctgcagaatcactcaggtagcttgtcagcaccagtgcccagaggcaggaaa
gggaagaagacaaagaaccagatgctgcttcctgagataaagaatgcagactggctcgcc
acctgcaaccccgaggtggtgctccatgatgacagctacaagaagcacctcaaacaacac
tgcaacaaggttctgctgcgggtgcgaatgctctactacctgaaggctgaagtgctgggg
gaggctgcagataaagccttcgaggggacccctgccagggagctggatgtgctgctgcca
gacattgactacgtggagatcccagtggactggtggaatgctgaagctgataaatccctg
ctcattggcgtcttcaagcatggttacgagcggtacaacgccatgcgggcggacccagcg
ctgtgtttcctggagaaggtgggcatgccagatgagaagctgctctctgccgagcagggc
gtcagcgatggggcacaggatgctgctgaaaggggcagtgtggaaaaagaagagagcagt
ggagaaaagctggagggactgtcaaaacaggaggacatcgtggcttctggggtgggtgaa
gccagtgagaagcgggacgaaccagcggcagcccaggatggctccgactcagacagatcc
tgctggcctgtctcctctgctctcacggccagactgcggcgactcgtcaccgtctaccag
cgctgcaaccgtaaggaggtgcctccccgcacggagatgctggtgcctggtaaccatggc
tactggctgcaggatgagatgttccggagagcctctgagatggactcagtgaacaaagaa
atacagaaaaggtggaccaggagggagcaggcagatttctaccgcactgtctcctccttt
ggggttatctatgaccaagagaaaaaaatctttgactgggcccagttccgagccatctct
cgactggagaagaagacggatgagagcctggagaagtacttctacagctttgtggccatg
tgcaagaatgtctgtggtctccctttgtggaaagaggatggtcctccagaccctgacatc
tacgtggagcccatcacggaagagcgtgctgccaggaccctgtaccgcattgagctgttg
cggaaggtgcgcgagcaggtgctcaagtgtccccagctccacgagcgcctcaagctgtgc
cggcccagcctctacctgcccgtgtggtgggagtgtggcaaacacgaccgggacctgctg
atcggcaccgccaagcacggcctgaaccgcaccgattactacatcatgaatgacccccag
ctgtcttttttagacgcatacagaaactatgcccagcataaaagaacagggatcccaggc
ccagaaactctctgctgcctttaccagtccaactctgaactctacagttcccctgtgtac
agccagatggaccagacctgtgaaaccctggagaatgaagccgagagtcacatcaagcta
gaaactgtggacagcaccatgtcccaggctggaggcagcccactggacacaaactgtgaa
acgttcatgtctgaggtgcgggacatcatttccagtaactatgacgagagctcgctgccg
gactcgctggtgtgcatgatgtatgatgagaaggcctgtcccagcgagcagagctccctc
gccagggacagcccaagctgcacagatgtcggaagcagcgttgccaaactctctgagggc
aagctggagggggatgaggatccatccagctgtgatgcagatgccatgagagaggctccc
ttccttgagggcttgcaggtgggctctgaccaaatggacagtcagaatgaggaagctgag
gcttcgccttctacccccgagagcaatccttcacagagtgcctcaaccaagctcagcaaa
ggcttggaacagaaaggagcacttgccagcccgtcagcagggctgcccgagcatgacacc
atggaaagggtcctaagtgtggggctatacagtcccagtctccataactatgaactgaag
gctcctcctgagcagaggttcatcagtctgctgcaggagaaaggactggaggcaaagttg
gggccaagtcagagccacagtgaggaagatgaggaggacgaagaggatgatgataactct
gaggcagcagcagatgctgtggaaggcttgaatcgtcccaggaccagggctgattgtgac
ccagaggctcatgaactggggggtgaggagcagagctccggtctccccacacctgagaac
acttgcccagaagacataaatggcgagagggagtctcccagggcagagggcagggaggac
tgtggcttgaatgaggagagcacccagcagcactcaccaggccaggctcagagccagccc
ttcagcctgcccacacctctgcttcagggggaacctcggagggcagagcccccttgtgtc
atgggggagcccttcagccaagatgctgaggggcagacaggctgcacagagaccccacac
cctgagcctcagggcataaatcaagaagagtgtgagaacagagatgatgaggagaaagcc
agcagtaaccagagccaagatggtccagagaagtacttggaggaagagaacaagaattct
gcttctgtcctgcctggggagattgatgatcttcaggatgcccgggcaccgaccattgcc
cagctgctgcaggaaaagacactttactccttctctgagtggcctaaggaccgtgtgatc
atcaaccgcattgacaacatctgccatgccatcctgaagggcaagtggccttcctccagc
cagcagtttgaggcacagagcctgctgacaaccccagccatggccagcaacaccggcagc
aggagcagctttaccgagtcagagagccccgatcccagcttcaatagtggagtcttaatg
tcacgggtacaaaaggaaggtttcctgagccctgcctttgcaaaagacgagcggaagcac
aggagaccctatgaattcgagatggagagagatgccaaacagaggagcctggagcagctg
gcagcagcccatgtccatccacccattgtgctgaatggctggcacgaggcagcggtggac
ttgtccagagcctctgatgggtcccaggggaactcctctcctttccccctgaacacaaac
atgcccaaactggggaccatgagtgccctccagagctccctgggcatggacttgtctggc
atcctacaggcagggttaatccatcctgtcactggacagattgtaaacggcagcctccga
agagatgatgctgccatgaggaggagacggggcaggaggaaaaatgtcgaagggatggac
ctcattttcttgaaggagaggactcttccaaacaggctgcaggatgttcaggatgaccag
ccgcagccccctcagaacagtcccctccctgatgggtcggttgctgctacctcaactcca
cagccagtcccagctgcaggcagccaagagaaggctgtcccgaataagagtctccttgac
tggctccggcagcagtctgactacacactcgatgttcccagctttggcacaaatttttca
gacaagcccaagcagaggaggcagcgctgcaaggaccccaacaaactggacattagctct
ctgacgggagaggagcgggtgccggtggtacataagggtaccggacggcggttaggggga
gccacggcaccagcattgaaggaattgccaaggtggcttgatgcaaacttggagtatgct
gttgcagctgactgggctgacattgttaagctttcaggctacttacccgaaaacaaattc
aatcgcatcctcaccgagcctgtgctccgggacgctgggccgcgacggagagggaggagg
ccccggagtgaactccttaaaggccctggtgttgtagcagattcttcttctggaatggga
ccattgttcatgaacggactaattgctgggatggatctagtgggacttcagaacatgaga
aatatgcaagggatccctctgaccgggctggtcgggtttcctgctggctttgcagcagtg
cccgctggtgaggatgtgaagagcaccctgagcatgttgcccatgatgctgccgggcatg
gcgaccgtaccccagatgtttggtgtgggaggactcctcaactccccaatgacaacgact
tgcaccgcaactgctccgacttcgttaacaagcacaacgaaaggtggcacagccagcgcc
gagaaggccaacgaggagaaacagggcagccaggatgggaaaaaagaacctctcgccgaa
gataagcctggtcctagttcattttctaatcagacagaatccgcaataactaccagtagt
cctgtagcttttaacccatttcttatcccagggatgtctcctggactgatctatccctcc
atgttcctttcccctggcatcggcatggcgctgcctggcatccagcaaaccaggcactca
gaggtggcaaacctggagagccagaagcggaagaggaagaaagcaaaaggggaattggca
aatccagagccagaaactgtctcactgccggaaaaagaagatgcaaacagtcaaaactgt
gtggagcagagcccaccagcagcagcagagaaggagcaggacggaccagcagagaaggag
cgccaagcagctcacaataccgattag
DBGET
integrated database retrieval system
