KEGG   Conexivisphaera calida: NAS2_0540
Entry
NAS2_0540         CDS       T06635                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
ccai  Conexivisphaera calida
Pathway
ccai03030  DNA replication
ccai03410  Base excision repair
ccai03420  Nucleotide excision repair
ccai03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ccai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NAS2_0540
   03410 Base excision repair
    NAS2_0540
   03420 Nucleotide excision repair
    NAS2_0540
   03430 Mismatch repair
    NAS2_0540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccai03032]
    NAS2_0540
   03400 DNA repair and recombination proteins [BR:ccai03400]
    NAS2_0540
Enzymes [BR:ccai01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     NAS2_0540
    6.5.1.6  DNA ligase (ATP or NAD+)
     NAS2_0540
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     NAS2_0540
DNA replication proteins [BR:ccai03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    NAS2_0540
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     NAS2_0540
DNA repair and recombination proteins [BR:ccai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     NAS2_0540
   NER (nucleotide excision repair)
    Other NER factors
     NAS2_0540
   MMR (mismatch excision repair)
    Other MMR factors
     NAS2_0540
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase DUF6760
Other DBs
NCBI-ProteinID: BBE41929
UniProt: A0A4P2VBM8
LinkDB
Position
495510..497300
AA seq 596 aa
MSSNGDLQFSVLAEVFERMEEITSRNALTDMLIDLFKRAPPEILDEIVYLMQGKLYPDFV
GVELGVGEKLLLRAISLASGLSQERVEELYRKLGDIGRAAEEAEKSRKQVVLFREPLTVH
RVYTTLERVAKASGEGAQDSKVKLLASLFNDAEPLEARYLARIVMGRLRLGVADYTVLDA
LAVAFGGTKEAREVVERAYNVSSDLGLVARTVAAEGLEGLKSIRITVGRPIRPMLAERLS
SPKEILDKMGGKVAAEYKFDGERMQVHRSGDRVMVFSRRLENITSHYPDVVEIARTGLRS
SDAIVEGEGVAFDADTGEFLPFQELMHRRRKYGVEKAMEEYPVSLYLFDVIYADGVDYTT
RPYMERRKKLEEIVEVGERMNIAPMMMTSDPDEMERFMMEAIEKGCEGLVVKDPSSVYRA
GAREWSWIKLKREYRSEMTDTVDLVIVGAFHGRGKRAGVYGAYLLAAYDQGSDTFKTVCK
VGTGFTDEDLRNFHDMLQQYVIDHRHPRVDSKMDADVWFVPQVVIEVLAAEITLSPIHTA
AWGAIRPGAGLALRFPRYTGKLRTDKGPEDATTVTELVEMYRSQIKKIEETPSEGS
NT seq 1791 nt   +upstreamnt  +downstreamnt
ttgagctccaacggcgaccttcagttcagcgtcctcgccgaggtattcgagcggatggag
gagataacgagcaggaatgccctcacggacatgctgatagaccttttcaagcgcgccccg
cccgagatactggacgagatagtctacctgatgcaggggaagctctacccggacttcgtg
ggggtggagctaggcgtgggcgagaagctcctcctcagggctatatccctcgcgtccggg
ctctcgcaggagcgcgtcgaggaactctacaggaagctgggcgacataggcagggccgcc
gaggaggccgagaagtccaggaaacaggtcgtcctcttccgcgagccgctgacggtgcac
cgcgtctacacgacgctcgagcgcgtcgccaaggcctcgggggagggcgcgcaggactcc
aaggtgaagctcctggccagcctcttcaacgacgcggagcccctggaggcgcgctacctc
gccaggatagtcatggggaggctgaggctcggggtcgcggactacacggtgctggacgcg
ctcgcggtggcgttcggcgggacgaaggaggccagggaggtcgtcgagagggcgtacaac
gtctcgagcgacctggggctcgtcgccaggacggtcgccgcggaggggctcgaggggctg
aagtccatccggataactgtcgggaggcccataaggcccatgctggcggagaggctcagc
agcccgaaggagatactggacaagatgggcggaaaggtcgccgcggagtacaagttcgac
ggtgagcgcatgcaggtccacaggagcggcgaccgggtgatggtcttctccaggaggctg
gagaacataacgtcccactacccggatgtggtcgagatagcgaggaccgggctgaggtcg
agcgacgcgatagtcgagggcgagggggtcgcgttcgacgccgacacgggggagttcctg
ccgttccaggagctcatgcacaggaggcgcaagtacggcgtggagaaggcgatggaggag
taccccgtctccctctacctgttcgacgtcatctacgcggacggcgtggactacacgacg
aggccgtacatggagaggaggaagaagctcgaggagatagtggaggtcggcgagcgcatg
aacatcgcccccatgatgatgacgtccgatcccgacgagatggagcgcttcatgatggag
gcgatcgagaaggggtgcgagggcctcgtggtcaaggacccctccagcgtctacagggcc
ggcgcgagggagtggtcctggataaagctgaagcgcgagtacaggagcgagatgacggac
accgtggacctggtgatagtcggcgcgttccacggcagggggaagagggccggggtctac
ggcgcgtacctgctcgcggcgtacgaccagggatcagacaccttcaagaccgtgtgcaag
gtcgggaccggattcacggacgaggacctgaggaacttccacgacatgctccagcagtac
gtgatagaccatcgccatccgcgcgtggactccaagatggacgcggacgtctggttcgtc
ccgcaggtcgtcatagaggtgctcgcggccgagataacgctcagccccatacacacggct
gcatggggggccatcaggccgggcgcggggctcgcgctcaggttccccaggtacacgggc
aagctcaggaccgacaagggaccggaggacgcgaccaccgtgacggagctcgtggagatg
tacaggagccagataaagaagatagaggagacgccctcagagggctcctga

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