Cajanus cajan (pigeon pea): 109801514
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Entry
109801514 CDS
T04868
Name
(RefSeq) polygalacturonase At1g48100
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj00040
Pentose and glucuronate interconversions
ccaj01100
Metabolic pathways
Module
ccaj_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109801514
Enzymes [BR:
ccaj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
109801514
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
Pectate_lyase_3
GPR15L
Motif
Other DBs
NCBI-GeneID:
109801514
NCBI-ProteinID:
XP_020218185
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Position
6:complement(10505400..10508542)
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AA seq
473 aa
AA seq
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MKRHRSFSSLFFLSLLVIIFVTFSIISAEARKTNIKRKLHKRHKGSHSSNGHTGGSHSPC
PTPTPLPHYGPQGSTFDVLSFGAKGNGVSDDSEALVAAWNGACKVAGATVKIPAQLKFLI
KPVTLQGPCMPDLTLQIDGTLLAPPEASSWPKSNLFQWINFKWVQNFTVKGSGIVDGQGN
NWWSSSEFYDTQKKSYSKQIPGIKPTAIRFYSSNLVTVRDIRIINSPLCHLKFDNSKGIK
VDNITIFSPENSPNTDGIHLQNTQDAEIQRSIIGTGDDCVSIQTGCSNIHVHHINCGPGH
GISLGGLGKDKSAACVSDIIVEDISMKNTLYGARIKTWQGGIGMVKNVSFSRIQVYDVMF
PIMIDQYYCDKQICKNHTGTVVISGVKFDQISGTYGMQPVHLACSNSIPCTDINLTDIQL
SPSLKYRGLQQAVCWNSYGKSQGHLLPSSIDYCLRSGGGLIKRIARSHDRVCN
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggcacagaagtttttcctcactttttttcctgtctttgttggtgattatcttt
gtcacattctctataatttctgcggaagcaaggaagactaatatcaagagaaaacttcac
aaacgtcacaaaggtagtcatagtagcaatggtcacactggaggatcacattctccatgt
ccaacgccaacccctcttcctcattatggtcctcaagggagtacctttgatgttttatct
tttggcgccaagggcaatggagtttctgatgattcagaggcacttgtagctgcatggaat
ggtgcatgtaaagttgctggtgctacagttaaaattccagcacaactcaagttcctcatc
aaacctgtcactttgcaaggcccttgtatgcctgaccttactcttcagatagatggaact
ctattggcacctcctgaagcatcttcctggccaaaatcaaatttgtttcagtggataaat
ttcaagtgggtccagaactttaccgttaaaggctctggcattgtagatggccaaggcaat
aactggtggagctcctcagaattttatgacacacagaagaagagctactccaaacaaatt
ccaggcattaaaccaactgctataagattctactccagcaacttggtcacagttcgcgat
atcagaatcataaacagtcctttgtgccatctaaaatttgacaactcaaaggggatcaaa
gttgacaacattacaattttctccccagagaatagcccaaacactgatggcattcactta
cagaacacacaagacgcagaaattcaacgttctatcattggaacaggagatgactgtgta
tccatccaaaccggttgctctaatattcatgtccaccacattaattgtggccctggacat
ggcataagtttgggaggattaggaaaagacaagagtgcggcatgtgtctctgacatcatt
gttgaggatatctctatgaaaaacactctatatggagcaaggatcaaaacatggcaggga
ggcattggtatggttaaaaatgtgtcattttcaagaatccaagtctatgatgttatgttt
ccgattatgattgaccaatactattgtgacaagcaaatctgcaagaaccacacaggcact
gtggtgatttctggtgttaagtttgatcaaataagtgggacttatggtatgcagcctgtt
catctagcttgcagcaattccataccctgcacagatattaatttaacagacattcaactg
agtccctcccttaaataccgagggttgcaacaagctgtgtgttggaactcttatggaaaa
tcacaaggccacttactaccttcaagcattgattattgtttgagaagtggtgggggattg
atcaagaggatagcaaggtcacatgatagagtgtgtaactaa
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