Cajanus cajan (pigeon pea): 109801891
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Entry
109801891 CDS
T04868
Name
(RefSeq) KH domain-containing protein At4g18375
KO
K21444
poly(rC)-binding protein 3/4
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109801891
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
109801891
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KhpA-B_KH
KH_5
Dsl1_N
Motif
Other DBs
NCBI-GeneID:
109801891
NCBI-ProteinID:
XP_020218643
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Position
7:complement(15007085..15010621)
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AA seq
541 aa
AA seq
DB search
MAGQRSSHGKRSHSHTDADAGTKNKRRNPAADDSSLIAAEDTVFRYLCPVRKIGSVIGRG
GDIVKQLRADTKAKIRIGDALPGCDERVVTIHSVSEETNRLDXXXXXVSPAQGALFRIHQ
RVVAEDARDDDDDDKNNVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDDRLP
PCALSSDELVQISGEAAVVKRALYQIASQIRDNPSRSQHMLASAVPGAAGGPGGGAPIVG
VAPFVGAYGGYKGDAGDWSRSLYPAPRDESSLREFAVRFVCPTGNIGGVIGKGGAIINQI
RQDSGANIKVDSSAIEGDDCLIIISMKEFFEDSFSPTIEAAVRLQPRCSEKVERDSGIVS
FTTRLLVPTSRIGCLIGKGGTIVTEMRRLTKANIRILSKENLPKIASDDDEMVQISGDLD
VAKDALVQALTRLRANLFDKERAVSGFLPVLPYLPPSVDGSDGLNYDSRDGKRHGRGGHS
YSGGYGGSSDLASGDGYGNYGNSQLAGGGGAYGAYGSYSLGRANAYGSSQNGASRRRNHA
Y
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggccggtcaacgcagttctcacggcaagcgctcccactcgcacacggatgccgacgcc
ggcaccaaaaacaagcgccgcaaccccgccgcggatgactcctccctcatcgccgccgag
gacaccgtcttccgctacctctgccccgtccgcaagatcggcagcgtcatcggccgcggc
ggcgacatcgtcaagcagctccgcgccgacaccaaggccaagatccgcatcggcgacgcg
cttcccggctgcgacgagcgcgtcgtcaccatccacagcgtctccgaggagaccaaccgc
ctcgacnnnnnnnnnnnnnnngtctcgcccgcgcagggcgcgctcttccggatccaccag
cgcgtcgtcgccgaggacgcgcgtgacgacgacgatgacgacaagaacaacgtcaccgcc
aagctcctcgtgccgtctgatcagatcggatgcgtcatcggcaaaggcggccagatcgtg
cagaacatccgcagtgaaaccggcgcgcagattcggatccttaaggatgatcgtttgcct
ccttgcgccttgagctccgatgaacttgttcagatttccggggaagctgcggttgtgaag
agagctctgtatcaaattgcatcccagattcgtgataatccgtcacggtctcagcatatg
cttgcttctgccgttcctggtgcagctggtggtcctggtggaggggcccctattgtgggt
gtggctccttttgtgggtgcttatggggggtataaaggtgatgctggtgactggtcacgg
tctttgtatcctgctcctagggatgaatcatctttgagagagtttgcagttaggtttgtt
tgtcccactgggaacattggtggtgtgataggaaagggtggtgccataataaatcaaatc
aggcaggattctggcgcaaacatcaaagttgatagttcagcaattgaaggagatgactgt
ttgataatcatttcaatgaaagagttctttgaggactctttctctccaacaatagaagct
gctgtgcgattgcaaccccggtgcagtgagaaagtggaaagagattcaggaattgtctca
ttcactacccgtcttttggtgccaacctcacgaattggttgtcttattggtaaaggaggg
acaattgtaactgaaatgaggaggcttacaaaagcaaatattcgcatcctgtcaaaggaa
aatcttcctaaaattgcatctgatgacgatgaaatggtgcagatttcgggagaccttgat
gttgccaaggatgctcttgtgcaagcacttacacggctgagagcaaatctttttgataag
gagcgtgctgtctcaggattccttccagtgctaccatatcttcctccttcagtggatgga
tcagatggtttgaactatgacagtagagatggtaaacgacacgggcgtggtggacattca
tattcaggtggatatggaggttcaagtgatttggcatctggtgatggttatggaaactac
ggaaattcacagcttgctggcggcggtggtgcatatggagcttatggaagttattctttg
ggaagggctaatgcctatgggtctagtcagaatggtgcttcccggaggagaaaccatgct
tactaa
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