Cajanus cajan (pigeon pea): 109801927
Help
Entry
109801927 CDS
T04868
Name
(RefSeq) zinc finger CCCH domain-containing protein 19
Organism
ccaj
Cajanus cajan (pigeon pea)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
SWIB
GYF
zf-HC5HC2H
PHD
GYF_2
zf_CCCH_4
zf-HC5HC2H_2
zf-CCCH
DUF6017
Motif
Other DBs
NCBI-GeneID:
109801927
NCBI-ProteinID:
XP_020218688
LinkDB
All DBs
Position
7:17784100..17795781
Genome browser
AA seq
1472 aa
AA seq
DB search
MDVEDDQAPPLHQHSDAQCLADLPYAAAGDPLPLASGDFSPAPALVAEVATATTLETDSM
TETVAAVPADDMIEEKGNDGTDADDVALEAGNVEEEANFTIHAEEDEIGEEKVNEDALME
EEEGEEEEHQQGEEEEEEEHRHGEEEEEEEEQQQGEEEEEEEQQQGEEEDADGDAGMAIG
EDAEEKEEKSASGGKRKRGAGKNAKATGRVASRKKMEEDVCFICFDGGDLVLCDRRGCPK
AYHPSCVNRDEAFFRAKGKWNCGWHLCSICEKNAHYMCYTCTFSLCKGCIKDAVILCVRG
NKGFCETCMRTVMLIEQNEQGNNVGQIDFDDKNSWEYLFKDYYIDLKEKLSLTFDEITQA
KNPWKGSDMLHSKEESPDELFDASNDKESDSDSSYENVDLSRSKRRKGKKRGKSRSKEGN
SNSAVTMVGADGPSGDDSFEWASKELLEFVMHMRNGDKSVLSQFDVQALLLEYIKRNKLR
DPRRKSQIICDARLQNLFGKPRVGHFEMLKLLESHFFLKEDSQAEDLQGSVVDTEISHLE
GDGNPNSYMKAGKDKRRKNRKKGDERGLQTNVDDYAAIDNHNINLIYLRRNLVEDLLEDV
EKFHDKVVGSFVRIRISGSGQKQDLYRLVQVVGTCKAAEPYKVGKRMTDILLEILNLNKT
EIVSIDIISNQEFTEDECKRLRQSIKCGLINRLTVGDIQDKALVLQAVRVKDWLETEIVR
LSHLRDRASEKGRRKELRECVEKLQLLKTPEERQRRLEEIPEIHVDPNMDPSYESEEDED
EMDDKRQENYMRPRGSTAFGRRGRDIVSPRSGSIPIDSWGGTRNYSNMNPELSRNLSNKG
FPIKGDNASNANEVLHDAQLLQGRDRESQLSNSWERQKLSLESGAKITQPLVTSEPFSTG
VLEASAAPSSAGITPPALKINETEKMWHYQDPSGKVQGPFSMVQLRKWSNTGYFPADLRI
WKTTEKQDDSILLKDALAGNFSKEPSMVDKAQAVHDLHYPSSHSRKSVQQGIEGQVGERQ
TFDQNSGSWNSHSTLGSPGQTTGVSWRSKDNMNSLANRPSPLAVEVPKNPANGWGSDAGV
RNETTNLPSPTPQTTPGGNKGQAFENKWSPTPVQLPGSLIGNPFPGNHGGLQASVVVHPE
HAVQNAEKGSNSQPSIISASTDSNQLHPQATAMAPVLASVVDMKMAGANMQNQVMSGHNS
HEAQGQGWGSTAVSKPESQAWGGTLSQRIEPNNPATMPAQPASHGPWGDPSSVQNTAAFS
TGNPTGSLPTPGFMGMTTPEPWRPPASSSQLNITAPSAAPPNMPWGIGMPGNQNMNWSGV
VPPNMNVNWIPPQVPPPGNSNPGWAAPSQGLPPVNGVGWVGPAQGRSHVNANAGWAGPGQ
GLAPGSANPGWAAPAGNPGMWGNEQGHNGDRFPNQGDRGMHGRDRFPNRQSSFGGGGRGG
SSRPPFGGQRGVCKYHESGHCRKGSSCDFLHT
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgaggacgaccaagctccaccgcttcaccaacactccgatgcacaatgtctc
gccgacctcccctacgccgccgccggagaccctctacccctcgcctcaggggactttagc
ccagcccccgcgcttgtcgctgaagtggctaccgcgaccacgcttgaaaccgattcaatg
acggagacggtggccgccgtaccggctgacgacatgattgaggagaaggggaatgacgga
accgatgcggatgacgtggctttggaggcggggaacgtggaagaggaagcgaatttcaca
attcatgcggaagaggacgaaattggggaggaaaaggtgaatgaagatgctttgatggaa
gaggaggagggagaagaggaagaacaccaacaaggagaggaggaggaagaagaagaacac
cgacatggggaagaggaggaagaagaagaagaacagcaacaaggagaggaagaggaggaa
gaagaacagcaacaaggtgaagaagaagatgctgatggtgatgctggaatggcaattgga
gaagacgcagaggagaaggaggagaagagtgcgagtggcgggaagaggaagcgtggcgct
gggaagaatgctaaggctacagggagagttgcatccaggaaaaagatggaagaggacgtt
tgtttcatttgcttcgacgggggtgaccttgtgctctgtgaccgcaggggatgccccaag
gcttaccatccttcctgcgttaatcgtgacgaggcattctttcgggccaagggaaagtgg
aattgcggttggcatctttgcagcatctgtgagaagaatgcgcactatatgtgttataca
tgtacgttttctttgtgcaagggttgcatcaaagatgcggttatcttatgtgtcagggga
aacaaaggcttttgcgagacatgcatgagaactgtaatgttgattgaacagaatgagcag
ggaaacaatgtgggacaaatagattttgatgacaaaaacagctgggagtatctcttcaag
gactactacatagatctaaaagagaaactatctctaacatttgatgaaatcactcaagct
aaaaacccttggaagggatctgatatgcttcattctaaagaggaatcaccagatgaactt
tttgatgccagtaatgataaggaatcagattcagatagctcctatgagaatgtagatttg
agccgttctaaaagaagaaagggcaagaaacggggaaagtcccgctccaaagaaggaaat
tcaaatagtgcagtgacaatggttggtgctgatgggccatctggagatgacagctttgag
tgggcttcgaaagagcttttggagtttgttatgcacatgagaaatggagacaaatctgtt
ttgtcacagtttgatgtgcaggctcttttgttagagtatattaaaagaaataagcttcga
gatcctcgccgaaaaagtcaaattatttgtgatgcaagacttcaaaatctgtttggtaaa
ccaagagtggggcattttgaaatgttaaagcttcttgaatcccatttctttctaaaagag
gattctcaggctgaagatctgcagggaagtgttgttgacactgaaattagtcatttggaa
ggtgatggcaatcccaattcatatatgaaagctggcaaagataagagacgtaaaaatcgt
aaaaagggtgatgagagaggacttcaaactaatgttgatgattatgcagccattgataac
cataatattaatttaatttatctaagacgcaatttggtggaagatctacttgaagatgta
gagaagtttcatgataaagttgttggttcttttgtgagaataagaatttctggtagtggt
cagaagcaagatttgtataggctggttcaggttgtaggtacatgcaaagcagcagagccg
tataaagttggtaaaaggatgacagatattttgctagaaatcttaaatttaaacaagaca
gagattgtatcaattgatattatctcaaatcaggagttcaccgaggatgaatgcaagcgt
cttcgccaaagcataaagtgtggcctcataaatcggctaactgtgggtgacattcaagac
aaagcattggtgcttcaggcagttagagtaaaagattggctagaaacagagatagtgcgg
ctgagtcacctccgtgatagagctagtgagaaaggacgcagaaaagagctcagagaatgt
gtagagaagttgcagcttttgaaaacccctgaagaacgacaacggaggttggaggaaatt
ccagaaatacatgtggatccaaacatggatccaagttacgagtctgaagaagacgaagat
gaaatggatgataaaagacaagaaaattacatgagacctagagggtctactgcctttgga
aggagggggagagatattgtttctcctagaagtggttctattccaattgattcttggggt
ggaacgaggaattattctaatatgaatcctgaactcagcagaaatttatctaataaggga
tttccaatcaaaggtgacaatgcttctaatgctaatgaggtacttcatgatgctcaattg
ctccagggaagagatagggaatcccaactatctaatagctgggagaggcaaaagctttcc
ttggaaagtggtgctaaaattacccaaccattggtaacatccgagcctttctctactggt
gtattagaagcttctgcagcaccatcttctgccggaataactcctccagctctgaaaatt
aatgaaaccgaaaagatgtggcattaccaggatccatccggaaaagttcagggaccattt
tctatggtgcagctacgcaaatggagtaacacaggatacttccctgctgatttgaggatt
tggaaaaccactgagaagcaagatgattctatacttctaaaagatgccttagcagggaat
ttttctaaggaaccatcgatggtggataaggctcaagctgttcatgatttacattaccca
tcctcgcactctaggaagtctgtccaacaaggtatagaaggtcaagttggagaaagacaa
acatttgatcaaaatagtggatcttggaattcacatagtactctgggttctccgggacaa
accacaggagtcagttggagatctaaagataatatgaattctttagcaaatagaccttct
ccattggcagttgaggtccccaagaaccctgcaaatggctggggttctgatgctggtgtt
agaaatgaaacaacaaatcttccttcacctactccccagactactcctggtgggaataag
ggacaggcttttgagaataaatggtcaccaacacctgtccagttgcctgggtctctcata
ggaaatccatttccaggcaatcatggaggtttgcaggcctctgtggtagtgcacccagag
catgccgtacaaaatgctgaaaaaggctcaaattcacaacctagtattatttcagcttct
acagattctaatcagttacatcctcaagcaacagcaatggcacctgttctagcttcagtg
gttgacatgaaaatggcaggtgcaaatatgcagaatcaggttatgagtggccacaactct
catgaagctcaagggcaagggtggggttccacagcggtttcgaagccagaatcacaggcc
tggggaggtacattatctcaaaggatagaaccaaataatcctgctactatgcctgcccag
ccagcttcccatggcccctggggtgatccttcgtctgtccagaacactgcagcatttagt
actggaaatccaactgggagtttacccacacctggatttatgggcatgactacacctgag
ccttggagaccaccagcttcaagtagtcagttaaacattacagctccgtctgcagctcca
cccaatatgccttggggcataggcatgccaggaaatcagaatatgaattggagtggggtt
gttcctcccaatatgaacgtaaactggatacctccacaggtgccgccacctggaaattca
aatccaggatgggctgctcctagtcaggggctacctccagtgaatggagttggctgggtt
ggaccggctcaaggacgttcccatgtaaatgcaaatgcaggttgggccgggcctggtcag
gggttagcacctggtagtgccaatcctggttgggccgcaccggccgggaatccaggcatg
tggggaaatgagcaaggtcataatggagacaggtttcccaaccaaggcgatcgtggtatg
catggtagagacaggtttcccaacagacagtcatcatttggcggtggaggcagaggaggt
tcttcgaggcctccttttgggggacaaagaggagtctgcaagtatcatgagagtggacat
tgcaggaaggggtcttcttgtgattttctacatacttag
DBGET
integrated database retrieval system
