Cajanus cajan (pigeon pea): 109803533
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Entry
109803533 CDS
T04868
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccaj04131
]
109803533
Membrane trafficking [BR:
ccaj04131
]
Protein recycling
Others
EARP complex
109803533
Endosome - Golgi transport
Tethering complex
GARP complex
109803533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
COG7
RINT1_TIP1
COG4_N
Vps54_N
Motif
Other DBs
NCBI-GeneID:
109803533
NCBI-ProteinID:
XP_020220736
LinkDB
All DBs
Position
8:complement(14298931..14310436)
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AA seq
836 aa
AA seq
DB search
MDKSSALEYINQMFPNEASLSGVEPLMQKIQNEIRTVDAGILAAVRQQSNSGTKAKEDLA
AATRAVEELMYKIREIKTKAVQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSA
VEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDIPKIIELREKFKNIKQILKSHVFSD
FSSLGTGKETEEANLLQQLSDACLVVDALEPSVREELVNNFCNRELTSYEQIFEGAELAK
LDKTERRYAWIKRRMRSNEEIWKIFPPSWHVSYRLCILFCKKTRKQLEDILANLKEKPDV
GTLLLALQRTLEFEDELAEKFGGGTQNREIGNEIEEIGRGTNSGSSALDIRKKYEKKLAA
HQGGDSEEKDGSKDLAVPGAGFNFRGIISSCFEPHLTVYVELEEKTLMESLEKLVQEETW
DIEEGSQSSVLSSSMQLFLIIKRSLKRCSALTKNQTLFNLFKVFQRILKAYATKLFVRLP
KGGTGIVAAATGMDGQIKTSDRDERVICYIVNSAEYCHKTAGELAESVSKIIDPQFSDGV
DMSEVQDEFSAVITKSLVTLVHGLETKFDIEMAAMTRVPWGTLESVGDQSEYVNAINLIL
TTSIPXXXXXXXXXXXLTTSIPALGSLLSPVYFQFFLDKLASSLGPRFYSNIFKCKQISE
TGAQQMLLDTQAVKTILLEVPSLGRQTSGAASYSKFVSREMSKAEALLKVILSPVDSVAD
TYRALLPEGTPMEFQRILELKGLKKSDQQSILDDFNKHGPGIKQTQVAPTIVPAPPVAPV
VPSPSAVGLIATREDVLTRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNP
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtcaagcgcgctggagtacatcaaccagatgttccccaacgaggcgtctcta
tccggcgtggagccgctgatgcagaaaatccagaacgagattcggaccgtcgatgctgga
attcttgccgcggttcgccaacagagcaattcaggaactaaggcgaaggaggatctcgct
gctgccacacgtgccgtcgaggaactaatgtataagatccgagagattaaaactaaagct
gtccagagtgaaacaatggttcaagaaatatgccgtgacattaagaaactggactttgca
aagaagcatataaccaccacaattactgcacttcataggcttacaatgcttgtctctgct
gttgaacagcttcaagtcatggcttcaaaacgtcaatataaagaggcagctgcgcagctg
gaggcagtgaaccagttatgtagtcactttgaggcctacagggatattccaaagatcata
gaactgagggagaagtttaagaatatcaagcaaatactcaagtcacatgtgttctctgat
ttttctagcttaggcaccggaaaggagacagaagaagctaatttattacagcagttgtct
gatgcctgcctggtggttgatgcattagagccttctgtaagggaagaattggtaaataat
ttctgcaatagggagcttacttcgtatgagcaaatttttgaaggagctgaacttgcaaag
ttggataaaactgaacgaagatatgcatggattaagcgccgaatgagatcaaatgaagaa
atttggaaaatatttccaccttcatggcatgtttcgtatcggctttgtatcctattttgc
aagaagacaaggaaacaacttgaggacattcttgctaatttaaaggaaaagccagatgtt
gggaccttgttattggctttacaaagaactttagagtttgaggatgaattggctgagaaa
tttgggggaggcactcaaaacagagagattgggaatgaaattgaagaaataggtagaggg
actaattctggtagcagtgccttggatatccggaagaagtatgaaaaaaagcttgctgca
catcaaggaggtgacagtgaagaaaaagatggaagtaaagatttggctgtgcctggagct
gggttcaacttccggggaattatttcatcttgctttgaacctcacttaactgtatatgta
gaattggaagagaagacactaatggaaagtctggagaaacttgttcaggaagagacgtgg
gatattgaggagggaagtcagagtagtgttttatccagtagcatgcagttgtttcttata
atcaagagaagcttgaagagatgcagtgctttaacaaagaaccagacactattcaatctg
ttcaaggttttccaaagaattcttaaagcatatgctacaaagctctttgtaagactccca
aaggggggcactggaattgttgctgcagccacaggcatggatggacaaataaagacatct
gatagggacgaaagggtgatttgttacattgtaaattcagctgaatattgccacaaaacg
gctggggaactggctgaaagcgtttctaaaataattgaccctcaattctcagatggggtg
gatatgtctgaagtgcaggatgaattttcggctgttataacaaaatcattggtgaccttg
gtgcatggtctggaaactaaattcgacattgaaatggctgcaatgacacgtgtcccttgg
ggtacccttgagagtgttggtgatcaatcagagtatgttaatgccatcaatttgattcta
actactagcattcctgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntctaactactagc
attcctgctcttggaagtcttctgtcacctgtctactttcagttctttctggacaagctt
gcatcatctcttggtccacgcttttattctaacatttttaaatgcaagcaaatatcagaa
actggagctcaacagatgctattggatacccaagctgtaaagacaatccttcttgaagtt
ccttcccttggtagacagacatcaggtgctgctagttattccaagtttgtaagccgtgag
atgagcaaagccgaggcccttttgaaggttatactttctccagttgattctgtggcagat
acttaccgtgcattgcttcctgagggtacacccatggagtttcagcgaatcctggagctt
aagggtctgaaaaaatctgatcaacaaagcattcttgatgatttcaacaaacatgggcct
ggaattaagcaaactcaggttgcacctacaattgtgccagctcctcctgtagctcctgtg
gtacctagtccctctgctgttggactcatagcgacacgggaagatgttttaactagggct
gctgcacttggacgaggagctgccaccacagggttcaagcggttcctagctctaactgaa
gctgccaaagacaggaaagacgggcctttccggaagctctttaatccatag
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