Ceratina calcarata (carpenter bee): 108629502
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Entry
108629502 CDS
T06061
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03022
Basal transcription factors
ccal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108629502
09124 Replication and repair
03420 Nucleotide excision repair
108629502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccal03021
]
108629502
03400 DNA repair and recombination proteins [BR:
ccal03400
]
108629502
Transcription machinery [BR:
ccal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108629502
DNA repair and recombination proteins [BR:
ccal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108629502
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
DUF3891
Motif
Other DBs
NCBI-GeneID:
108629502
NCBI-ProteinID:
XP_026673145
LinkDB
All DBs
Position
Unknown
AA seq
370 aa
AA seq
DB search
MADEEEEKEYRWETGYEKTWEAIKEDDHGLLEASVADIIHNAKRKRQMEKKVGARLGMMR
HIYIVLDASESMSHQDLKPTRFLCSLKVPTNIDNNIMMFLTIIXLMNIILVQDXILSSXE
VQSLHQISPSGEPSLQNSIELAMKSLRLLPSHASREILVVVGALTTCDPGDINETIQSLR
SDCVRCSVIGLAAELYICKRMATATGGEHGVALDDKHFKEQLNMHIDPPPAASRLDAALV
KMGFPHHALHSTANDSTMAVCMCHAENSDESVKLLGTGYLCPQCLSKHCELPVECRACGL
TLVSAPHLARSYHYLFPVEPFNEVGYSGIPSSCYGCQRTLSQKDKKAWNLRISNGNVAAL
KSWWEVIEVY
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgaagaggaagagaaagagtacagatgggagaccggttacgaaaagacatgg
gaagcgatcaaggaagacgatcatggcttgttggaagcatccgttgcagatatcattcac
aatgccaaaagaaaacggcagatggaaaaaaaagttggtgccagattaggaatgatgagg
cacatatacattgttcttgatgcatctgaatcaatgtctcatcaagacttgaaaccaaca
aggtttctgtgttccttgaaggtacccaccaatatagataataacataatgatgttccta
actataattncattaatgaatataattttggttcaagatnaaatcctttcttcttaggaa
gtacaaagtttgcatcaaatttcaccatctggcgaaccttcgttacaaaattccatagag
ttagcaatgaaatccttgcgtcttctaccatcccatgctagcagagaaatacttgtagtc
gtaggagcacttacaacgtgtgatcctggagatatcaatgaaaccatacaaagtttaaga
tcggattgcgtcagatgcagtgtgataggattggctgccgaattatatatttgtaaaaga
atggccacagcaactggtggcgagcacggtgttgctttagacgataagcacttcaaggaa
caattaaacatgcacatagatccacctccagctgctagcaggctagacgctgccctagtg
aaaatgggtttccctcatcacgcgttgcattccacagcaaatgattctacaatggcagtc
tgcatgtgtcatgcagaaaactcggacgaatctgttaaacttctaggcacgggttatctt
tgccctcagtgtctcagtaaacattgcgagcttcccgtggagtgcagagcttgtggatta
actcttgtatctgctccgcatctggctcgttcttatcactatttatttcccgttgagcct
ttcaacgaagtcggctacagcgggattccatcgtcttgttacggttgccaaagaacttta
tcccagaaagacaaaaaggcttggaacctgaggatttcgaacggtaacgtcgccgcttta
aaatcatggtgggaggtgattgaggtttattag
DBGET
integrated database retrieval system
