Ceratina calcarata (carpenter bee): 108630867
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Entry
108630867 CDS
T06061
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
ccal
Ceratina calcarata (carpenter bee)
Pathway
ccal03013
Nucleocytoplasmic transport
ccal03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccal00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108630867
03015 mRNA surveillance pathway
108630867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccal03019
]
108630867
Messenger RNA biogenesis [BR:
ccal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
108630867
mRNA cycle factors
P-body specific factors
108630867
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
108630867
NCBI-ProteinID:
XP_017889905
LinkDB
All DBs
Position
Unknown
AA seq
1149 aa
AA seq
DB search
MSEVEESAPETAEAAPEQDAVSEEDKKFLADYIKETEQRLNAKEEIRAANLNPNRPPESY
FSKLDSTLKRNTTFVKKLKNFSSIQLDTVLKDMTHLNLTKYVSEVATALVDAKLKMTDVA
PAIKVCSFLHQTYAEFSTHFFENWQRILSLKVVDKIANPSKLRVDLRFYAELVNAGIFTH
KQGLPLLGSALTVLINMDKEEHNNASIILSFCKHCGEDYAGLVPKKVREISEKLNTPIPK
SKLLSPDKQQNVRVLLRDYYNSLCKHLLKEHKDLQAFEKQNRKILQTRGELSSERKEKLE
SLQVSYERLLNNVQSFSDTLDEAMPELPVDNEMKAEAEESLKMISEGEENSILEDMWGDE
ETRRFYEVLPDLTVFLPGSYLKEVPKQDVPISEDTLDEEIAFDEIEEPEKVDEPEAEVEE
PQVSNISNKILLDAFITHLPNCVNRELIDNAAVHFLMNLNTKHNKKKLVKALFGVSRIRL
DLLPFYSRLAAILYPVMPDVGNDLCSMLKHDFKYHVRKKDQINIESKVKVVRYIGELVKF
KLYSKIEALYCLKVLLHDFTHHHIEMACNLLETCGRYLFCSPDSHQRTKVYLEQMMRKKA
VTALDSRYVTIIENAYYYVNPPETSGGTSRKDRPPIHEFIRKLLYQDLSKTNTDKVLKWM
RKLDWEDESVSSYAIKCLTAAHNVKYLNIRCVGSLLAGLVAHYETIGPHVVDGVLEDIRL
CMEINLPKFNQRRIAMVKYLGELYNYRMVESGDIFRTLYLLITFGVSMDHNIPSVLDPPE
HLFRIRLVCTLLETCGQYFSGGSSKKKLDYFLIFFQNYYWFKYTDPVWTQENPFPVGIDY
MYRDTLTMLRPKMQLFQSYKEAQCAVEELRNTLYPTLGNPTAEDGVERIEGESDMGVIVE
GDEDVAVTSGNGSGDAKGVADLHFEESEDCSEAQSEEDWTADGERDYTIGTQENTQGDQS
LSEGGTDGVIMDVTELNAALPAGPRRVSCPEDDDFLSALDKMVSDNIQDRMRDSVKPQQV
DISVPLHVKSTKKTYEQLQERPTDNNTVDFVLMLRKGNKQQYKNLAVPVSSELAMNLRNR
EQEQKEEKERVKRLTLNITERQEEEDYQETINQSTRPVTVNLNRERRQKYNHPKGAPDAD
LIFGPKKIR
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagtcgaggaatcagctccagagacagcagaagcagctccagagcaggatgct
gtgtctgaagaagacaagaagtttttagctgattacataaaagaaacagaacagcggcta
aacgctaaagaagaaattcgagctgctaacttaaatcccaatagaccaccggaatcatat
tttagcaagctcgattcaactttaaagaggaacacgacgtttgttaagaaattaaaaaat
tttagtagcattcagttagatacagttctaaaagatatgacacatttaaatctgaccaaa
tatgtaagcgaagttgctactgctttggtagatgctaaactgaaaatgaccgacgttgca
cctgctattaaagtatgcagtttcttgcatcaaacgtatgcagaattctcaactcatttt
tttgaaaactggcaaagaattttatcattgaaagttgttgataaaattgcaaatccaagc
aaacttagagtagatcttcgattttacgccgaactagtcaatgcaggtatttttacccat
aagcaaggattaccattgctcggttctgcgttaacagtattaattaatatggacaaagag
gaacataacaacgcaagcatcatattaagtttttgcaaacactgcggtgaagattatgca
ggccttgtacctaagaaagtgagggaaatatctgagaaactgaacacgccgatacctaaa
agtaaattactttctcccgacaaacaacagaatgtcagagtattgctgcgggattattat
aattcattatgtaagcatttgttgaaagaacataaagatcttcaagcatttgaaaagcaa
aatcggaagattctgcaaacgaggggcgagctaagttctgagaggaaagaaaaactcgag
agcctacaagtatcgtacgaacgtttattgaataatgtacaaagcttttctgatactttg
gatgaagcaatgccagaactgcctgtggataacgaaatgaaagcggaagcggaagagtcg
ttgaaaatgatcagcgaaggagaagaaaatagcattttagaagatatgtggggagacgag
gagacacgccgattctacgaagttctaccggatttaacagtatttctaccagggtcatat
ttaaaagaagtaccgaaacaggacgttccgataagcgaagacaccttagatgaagaaata
gcgttcgatgaaatagaagagccggaaaaggtagatgaaccagaagcggaagtggaagag
ccacaggtttcgaatataagtaataaaatacttctagatgcattcataacacacctgcca
aattgcgtaaatcgcgaattaattgacaacgcagcagtacactttctaatgaatctcaat
acgaagcataataaaaagaaattggtaaaagcgttgttcggtgtctccagaattcgttta
gatttattgccattttattcacggttggcggctattctttatcctgttatgcccgacgtg
ggaaacgacttgtgctcaatgttgaaacatgattttaaatatcatgtacggaaaaaagat
cagattaatatcgagtcgaaagtaaaagtcgtcagatatatcggtgaactcgttaaattt
aaactttactcaaagatagaagcactgtattgtttgaaggtcttgttacatgattttact
catcaccatattgaaatggcttgtaatttgttagaaacatgcggtagatacttattttgc
tcaccggactcgcatcaaagaacgaaagtttatttagagcagatgatgcgtaagaaggca
gtcactgcgttggattcgcgttatgtgacgataattgagaatgcgtattattacgtgaat
ccaccggaaacttcgggcggtacgtcgagaaaggataggccgccgattcatgaattcata
aggaaactgttgtatcaggatctttcgaaaaccaataccgataaagtactcaagtggatg
cgtaaattagattgggaagatgaaagcgtgtcatcttatgctattaagtgtctcactgcc
gcacacaatgttaaatatctaaatattcgatgtgtaggaagtttattagcgggactcgtc
gcgcattacgaaacgataggacctcatgtggtagacggtgtattggaagacataagattg
tgcatggaaatcaatttaccgaaatttaatcaacggcgtatcgctatggtgaaatatctc
ggagaactgtacaactatcgtatggtagaaagcggtgatattttccgaacgctgtatctc
ctaattacttttggagttagtatggaccataacataccaagtgttctagatcctcctgag
catctctttagaatccgtctggtctgtacattactggagacatgcggacaatatttcagc
ggcggttctagcaagaagaaactcgattactttctaatattcttccaaaattactattgg
tttaaatatacggatccagtctggactcaggaaaatccatttcccgtgggtatagattac
atgtaccgcgacacgctaacgatgctgaggcctaaaatgcaattgttccaaagttacaaa
gaagcacaatgcgctgtagaggaactgcgaaatacattgtatcctactcttggaaatcct
accgcagaagatggtgttgaacgtatcgagggagagtccgatatgggtgtaatcgtcgaa
ggagacgaggatgtggctgtgacatctgggaacggcagtggagacgcgaaaggtgtggct
gatttacactttgaagaatctgaagattgctcggaggctcaatcggaagaggactggact
gctgacggagaaagagattacactattggcacgcaggaaaatacacaaggggatcaaagc
ctttcggaaggtggtaccgatggtgtcattatggatgttacagaactaaatgcggcactg
ccagcgggtcctaggagagtaagttgtcccgaggacgacgacttcttgtccgctcttgat
aaaatggtttcagataacatacaagatagaatgcgagactcggtgaagccgcagcaagtg
gacatttcagtcccgctgcatgtgaaaagtaccaaaaaaacttacgaacaattgcaagag
agacctaccgataacaacacagtcgatttcgtgcttatgcttagaaagggtaacaaacaa
caatacaagaatctggcggtacccgtgtcatcggaattggcaatgaatcttcggaaccga
gaacaagaacaaaaggaagagaaggaacgagttaaaagattgacgttgaatattacggag
aggcaggaggaggaagattatcaagaaacgattaatcagagcaccaggccagtgacggta
aacttaaatcgggaacgacggcaaaaatataatcatcccaaaggcgcgccagatgcggat
ctcattttcggccccaaaaagattcggtag
DBGET
integrated database retrieval system
