Cupriavidus campinensis: M5D45_00225
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Entry
M5D45_00225 CDS
T08350
Name
(GenBank) IS3 family transposase
Organism
ccam
Cupriavidus campinensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_28
rve
rve_2
HTH_21
rve_3
HTH_29
HTH_23
HTH_32
HTH_Tnp_1
DDE_Tnp_IS240
LZ_Tnp_IS481
HTH_Tnp_ISL3
BrkDBD
DUF3206
Motif
Other DBs
NCBI-ProteinID:
URF04332
LinkDB
All DBs
Position
1:join(60848..61322,61322..62211)
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AA seq
454 aa
AA seq
DB search
MAKYDERFKLKLVRQYLAGPDGFKAIAAQYGVGYKLVQRWVASYRQHGQDGLRKKRNPYS
TEFKLSVLLRMWREGLSGEQTAALFDIRSPGCIGVWERRYHSGGIDALSPRPRGRPKTMP
QAIPPKSPAEPVADDERPRKELLKEIEYLRAEVAYLKKPRCLGSSEESSAAEKAQIVLEL
RQQYPLAGLLKAAGLARSTFYYQQKVVNAGDKHAELKARIRAVYTCHRGRYGYRRITATI
RQMGWIINHKTVQRLMGQLRLKSLVRPKKYRSYRGEMGRAAPNLLNRQFDAQRPNQKWVT
DVTEFNVGGEKLYLSPVMDLYNGEIIAYQTSKRPTFDLVGAMLKKALAKCQDNDKPMLHS
DQGWQYQMPAYRRMLKEHAVTQSMSRKGNCLDNAAMESFFGTLKAEYFHLNEFASVDELK
TGLARYIRYYNHDRIKLKLKGLSPVQYRTQPSGA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagtacgatgagcggttcaagctcaagctggtaaggcagtatctggctgggcca
gatggattcaaggcgatcgcggcgcagtatggagttggctacaagctcgtgcagcgttgg
gtggcgagctaccgccagcatggccaagacgggctgcgcaagaagcgcaatccctacagc
actgaattcaaactctcggtgctgctgcgcatgtggcgagaaggtctttcaggcgagcaa
acggcggcgttgtttgacatccgcagcccgggttgcattggcgtctgggagcgccgctat
catagtggcggtatagatgccctgtcgccccgacctcgcgggcgccccaagacgatgccg
caagccattcctcccaaatctccggccgagccggttgccgatgacgagcgtccgcgcaag
gaattgctcaaagaaatcgagtacctgcgcgcggaggtggcgtacctaaaaaaacctcga
tgccttggttcaagcgaagaaagcagcgcagcagaaaaagcgcaaatagtgcttgagcta
aggcagcagtacccgttggcgggcttgctcaaggccgcaggtttggcccgcagcacgttt
tattaccagcaaaaggtggtgaatgccggtgacaagcacgcggagctgaaagccaggatc
cgggccgtctatacatgccacagggggcgctatggctatcggcggatcaccgccacaatc
cggcagatgggctggatcatcaaccacaagaccgtacagcgccttatggggcaattgcgg
ctgaagtcgctggtgcggccgaaaaagtaccgctcctatcgcggggagatgggacgggcg
gcgccgaatctgctcaaccgccagttcgacgcacaacgtcctaaccagaaatgggtgacc
gacgtgaccgaattcaatgttggcggggagaagctatacctgtcgccggtgatggacctg
tacaacggcgagatcattgcctatcagacaagcaagcgacctaccttcgatctggtcggg
gccatgctcaagaaggcactggccaagtgccaggacaacgataagccgatgctgcattca
gaccaaggctggcagtaccagatgccggcctatcggcgcatgctcaaggagcatgctgtg
acgcaaagtatgtcccgcaagggaaactgccttgacaatgccgccatggaaagcttcttc
ggcacgctcaaggctgaatacttccacctgaacgagtttgccagcgtggacgagctcaag
accggactagcgcgctacatccgctactacaaccacgaccgtatcaagctcaaactaaaa
gggctgagtcccgtgcaatacaggactcagccctcgggcgcctag
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